[adegenet-forum] Calculation of individual Cavalli-Sforza -Edwardes distances using dist.genpop

Nevil Amos nevil.amos at gmail.com
Wed Sep 15 12:44:14 CEST 2010


  Is there any reason that dist.genpop cannot be used to calculate 
pairwise Cavalli-Sforza -Edwardes distances between individauls as follows

mygenpop<-genind2genpop(mygenind,pop=mygenind at ind.names)

Genmatrix<-dist.genpop(mygenpop,method=2,diag=F,upper=F)

cheers

Nevil Amos


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