[adegenet-forum] AFLP data format

[Pfau, Dr. Russell S.]

I have spent the past 5 hours reading the adegenet manual, tutorial, and forum and have yet to learn how to put my AFLP data into a file like the nancycats.RData file for use in analysis with adegenet.  How on earth does one do this?

I have my data in two format types, and have created simple test files showing the two format types that I have (see below).  Please help....where do I go from here!

Russell


table format:

		loc1	loc2	loc3	loc4
indA	pop1	1	0	1	1
indB	pop1	0	1	1	1
indC	pop1	1	1	0	1
indD	pop2	0	1	1	1
indE	pop2	1	1	0	0
indF	pop2	1	0	1	1
indG	pop2	0	1	1	0


STRUCTURE format:

		loc1	loc2	loc3	loc4
indA	pop1	1	0	1	1
indA	pop1	1	0	1	1
indB	pop1	0	1	1	1
indB	pop1	0	1	1	1
indC	pop1	1	1	0	1
indC	pop1	1	1	0	1
indD	pop2	0	1	1	1
indD	pop2	0	1	1	1
indE	pop2	1	1	0	0
indE	pop2	1	1	0	0
indF	pop2	1	0	1	1
indF	pop2	1	0	1	1
indG	pop2	0	1	1	0
indG	pop2	0	1	1	0