[adegenet-commits] r567 - in pkg: data man

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2010-02-12 16:31:18 +0100 (Fri, 12 Feb 2010)
New Revision: 567

Modified:
   pkg/data/H3N2.RData
   pkg/man/H3N2.Rd
Log:
remove lon and lat (redundant with xy); minor changes to the doc.


Modified: pkg/data/H3N2.RData
===================================================================
(Binary files differ)

Modified: pkg/man/H3N2.Rd
===================================================================
--- pkg/man/H3N2.Rd	2010-02-12 12:52:43 UTC (rev 566)
+++ pkg/man/H3N2.Rd	2010-02-12 15:31:18 UTC (rev 567)
@@ -11,15 +11,14 @@
 }
 \usage{data(H3N2)}
 \format{
-    \code{H3N2} is a genind object with a data frame named \code{...} as supplementary
-    component (\code{H3N2 at other)}, which contains the following items:
+    \code{H3N2} is a genind object with several data frame as supplementary
+    components (\code{H3N2 at other) slort}, which contains the following items:
     \describe{
         \item{x}{a \code{data.frame} containing miscellanous annotations
 	  of the sequences.}
         \item{xy}{a matrix with two columns indicating the geographic
-	  coordinates of the strains.}
+	  coordinates of the strains, as longitudes and latitudes.}
         \item{epid}{a character vector indicating the epidemic of the strains.}
-	\item{lon,lat}{geographic coordinates of the strains, indicated as north and east degrees.}
     }
 }
 \source{