[adegenet-commits] r736 - www
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Mon Dec 13 11:41:11 CET 2010
Author: jombart
Date: 2010-12-13 11:41:11 +0100 (Mon, 13 Dec 2010)
New Revision: 736
Removed:
www/documentation.html
Log:
have to restore previous version
Deleted: www/documentation.html
===================================================================
--- www/documentation.html 2010-12-13 10:39:01 UTC (rev 735)
+++ www/documentation.html 2010-12-13 10:41:11 UTC (rev 736)
@@ -1,120 +0,0 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
-<html>
-<head>
- <meta content="text/html; charset=ISO-8859-1"
- http-equiv="content-type">
- <title>documentation</title>
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-
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-<body>
-<br>
-<br>
-<br>
-<div style="margin-left: 40px;">As a <span
- style="text-decoration: underline;"><a href="http://www.r-project.org/"
- target="_top"><img alt="" src="images/R.png"
- style="border: 0px solid ; width: 30px; height: 23px;"></a></span>
-package, each component of adegenet is documented in help pages. As a
-starting point, one can type <span
- style="font-family: monospace; font-weight: bold;">?adegenet</span> in
-R to get an overview of package. <br>
-</div>
-<br>
-<div style="margin-left: 40px;"><span
- style="font-family: monospace; font-weight: bold;"></span><span
- style="font-family: monospace; font-weight: bold;"></span>The
-following other ressources are available:<br>
-- the adegenet <span style="font-weight: bold;">manual</span> (<a
- href="files/adegenet-manual.pdf">pdf</a>), which compiles all the
-documentation of the package.<br>
-- the adegenet <span style="font-weight: bold;">tutorial</span> (<a
- href="files/tutorial.pdf">pdf</a>), which goes through the main
-functionalities of the package. Regularly updated.<br>
-- <span style="font-weight: bold;">files</span> <span
- style="font-weight: bold;">required</span> for some parts of the
-tutorial<br>
- > <a href="files/AFLP.txt">AFLP.txt</a>:
-a
-toy
-dataset
-reproducing
-AFLP
-data
-<br>
- > <a href="files/haplo.txt">haplo.txt</a>:
-a
-toy
-dataset
-reproducing
-haploid
-data
-<br>
- > <a href="files/triplo.txt">triplo.txt</a>:
-a
-toy
-dataset
-reproducing
-triploid
-data
-<br>
-- <a href="files/worksOnlyInDiploids.txt">worksOnyInDiploids.txt</a>:
-the list of <span style="font-weight: bold;">functions</span> working <span
- style="font-weight: bold;">only for diploid</span> genotypes <br>
-- a <span style="font-weight: bold;">sPCA tutorial</span> (<a
- href="files/tutorial-spca.pdf">pdf</a>), showing how to use the
-spatial Principal Component Analysis (Jombart et al. 2008)<br>
-- globaldiv summer school 2009, Piacenza, Italie: <a
- href="files/globaldiv-TJ.1.3.pdf">talk</a>
-- <a href="files/globaldiv-PC.1.3.pdf">practical course</a><br>
-- Master 2 "Ecology, Evolution, Biometry", Lyon, France: <a
- href="files/talk-E2B.1.0.pdf">talk</a> - <a href="files/TD-E2B.pdf">practical
-course</a><br>
-- One-week course on Genetic Data Analysis, Bogota, Colombia: <br>
- > <a href="files/day1.1.2.pdf">lecture 1</a>:
-methodological overview<br>
- > <a href="files/day2.1.3.pdf">lecture
-2</a>: finding clusters, using cluster information<br>
- > <a href="files/day3.1.2.pdf">lecture 3</a>:
-spatial genetics<br>
- > <a href="files/practical-day1.1.2.pdf">practical
-1 </a><br>
- >
-<a href="files/practical-day2.1.1.pdf">practical 2 </a><br>
- > <a href="files/practical-day3.1.1.pdf">practical
-3</a><br>
-<br>
-Some information can also be found from the archives of the <span
- style="font-weight: bold;">adegenet forum</span>; just enter your
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