[R list package] Replication problem

Graeme Blair graeme.blair at columbia.edu
Thu Apr 2 22:35:37 CEST 2015


Dear Juan,

Thanks for your patience. This error was caused by a change in another
software package list depends on, and we have now resolved the problem. I
will send you a test version of the package off-list, and we will release
an update to CRAN including the fix soon.

Best,
Graeme

On Fri, Feb 27, 2015 at 1:52 PM Juan Felipe Riaño Rodríguez <
jf.riano48 at uniandes.edu.co> wrote:

> Hi!
>
> Working with my data to verify ceiling and floor liars, I used your
> replication code as a guide and got error messages about the Log likelihood
> not being monotonically increasing. But then I realized that I also get
> this error with your own code on your data, that is simply running the
> replication of your paper.
>
> In particular when trying to replicate Table 7, columns 3-6, as below, I
> get the error messages shown below (if I change the fit.start parameter,
> the error that pops out may change from object not found to non non
> monotonically increasing Log likelihood, but I always get an error anyways).
>
> In short, before concluding there is problem with my data specifically,
> given this finding I would like to point it out and make sure there is not
> a more general problem with the code (perhaps something got messed up in an
> software update or that of package dependencies?).
>
> Thank you very much,
>
>
>
> > data(race)
> >
> > ceiling.results <- ictreg(y ~ age + college + male + south, treat =
> "treat", J = 3, data = affirm, method = "ml", fit.start = "ml", ceiling =
> TRUE, ceiling.fit = "bayesglm", ceiling.formula = ~ age + college + male +
> south)
> Error in logistic(x.treatment.curr %*% fit.control.coef) :
>   object 'fit.control.coef' not found
> >
> > summary(ceiling.results, boundary.proportions = T)
> Error in summary(ceiling.results, boundary.proportions = T) :
>   object 'ceiling.results' not found
> >
> > # Fit standard design ML model with floor effects alone
> > # Replicates Columns 5-6
> >
> > data(race)
> >
> > floor.results <- ictreg(y ~ age + college + male + south, treat =
> "treat",
> +                       J = 3, data = affirm, method = "ml", fit.start =
> "glm",
> +                       floor = TRUE, floor.fit = "bayesglm",
> +                       floor.formula = ~ age + college + male + south)
> Error in ictreg(y ~ age + college + male + south, treat = "treat", J = 3,
> :
>   log-likelihood is not monotonically increasing.
> >
> > summary(floor.results, boundary.proportions = T)
> Error in summary(floor.results, boundary.proportions = T) :
>   object 'floor.results' not found
> >
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