[FLR-list] Plotting FLSR object

[Piera Carpi]

Hi all,
I’m trying to plot a FLSR object, but whenever I do:

sr <- fmle(as.FLSR(stk, model=“ricker”))
plot(sr) 

I obtain the following output, and no plots at all:

TableGrob (3 x 2) "arrange": 6 grobs
  z     cells    name           grob
1 1 (1-1,1-1) arrange gtable[layout]
2 2 (1-1,2-2) arrange gtable[layout]
3 3 (2-2,1-1) arrange gtable[layout]
4 4 (2-2,2-2) arrange gtable[layout]
5 5 (3-3,1-1) arrange gtable[layout]
6 6 (3-3,2-2) arrange gtable[layout]


Below info on my R session:


R version 3.2.2 (2015-08-14)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 14.04.3 LTS

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8    LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] msy_0.1.16            FLSAM_1.0             FLBRP_2.5.20140822    plyr_1.8.3            ggplotFL_2.5.20141027
 [6] reshape2_1.4.1        gridExtra_2.0.0       ggplot2_1.0.1         FLa4a_0.300.2         copula_0.999-13      
[11] triangle_0.8          mgcv_1.8-7            nlme_3.1-121          FLXSA_2.5.20140808    FLAssess_2.5.20130716
[16] FLash_2.5.2           FLCore_2.5.20150513   MASS_7.3-43           lattice_0.20-33       RevoUtilsMath_3.2.2  

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.1      tools_3.2.2      digest_0.6.8     gtable_0.1.2     pspline_1.0-17   Matrix_1.2-2     yaml_2.1.13     
 [8] mvtnorm_1.0-3    proto_0.3-10     knitr_1.11       stringr_1.0.0    stats4_3.2.2     ADGofTest_0.3    rmarkdown_0.7   
[15] magrittr_1.5     htmltools_0.2.6  scales_0.3.0     stabledist_0.7-0 colorspace_1.2-6 labeling_0.3     stringi_0.5-5   
[22] gsl_1.9-10       munsell_0.4.2”


Any idea why?

Thanks in advance! 

Piera


 

----------------------------------
Piera Carpi, Ph.D.
Istituto di Scienze del Mare (CNR-ISMAR)
Sezione Pesca Marittima-Ancona
Largo Fiera della Pesca
60125, Ancona - ITALY
Tel: 071-2078858
Fax: 071-55313
e-mail: piera.carpi at an.ismar.cnr.it



-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/flr-list/attachments/20160126/3407eab5/attachment.html>