[FLR-list] bug FLMetier

[Iago MOSQUEIRA (JRC)]

Hi,

Thanks for this. Will look at it later and fix


Iago

On 05/22/2013 04:53 PM, Clara Ulrich wrote:
> Hi,
>
> Sitting with JanJaap at MIXFISH we found a bug that did not appear
> previously, but came out of re-installing FLR packages today (R2.15.3,
> FLCore 2.5.0)
>
> It seems that unlike FLFleet and FLCatch, the creator of FLMetier use
> “age” as the default quant instead of letting it to “quant”.
>
> The issue that this has created for us is that e.g. whenever we tried to
> give some non-dimensional value to effshare, we got an error message
>
> Ex :
>
>> xx
>
> An object of class "FLQuant"
>
> , , unit = unique, season = all, area = unique
>
>       year
>
> quant 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012
>
>    all 1    1    1    1    1    1    1    1    1    1
>
> units:  NA
>
>> effshare(oth.metiers) <- xx
>
> Error in validityMethod(as(object, superClass)) :
>
>    Not all 'quant' names are the same. Check using qapply(x, quant)
>
> NB the error doesn’t occur when calling the slot directly:
>
> oth.metiers at effshare <- xx
>
> There is no logical reason for FLMetier slots to be in age, this should
> be reverted to default value is quant?
>
> Cheers
>
> Clara
>
>
>
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