[FLR-list] Missing SR relationships

Laurie lauriekell at googlemail.com
Tue May 14 19:12:27 CEST 2013


I think the help is older than the code!

Laurie

On 14/05/13 15:12, Mark Payne wrote:
> Has this been fixed in a more recent build e.g. on the repo? Is there 
> any reason why is there is discrepancy between the SRR functions 
> described in the help files and those that are actually available?
>
> Mark
>
>
> ------------------------------------------------------------------------
> *Fra:* flr-list-bounces at r-forge.wu-wien.ac.at 
> [flr-list-bounces at r-forge.wu-wien.ac.at] på vegne af Laurie 
> [lauriekell at googlemail.com]
> *Sendt:* 25. april 2013 17:57
> *Til:* flr-list at flr-project.org
> *Emne:* Re: [FLR-list] Missing SR relationships
>
> Its the brackets
>
> return(FLPar(a = max(exp(res[1])), b = -max(res[2])*)*, rho = 0)
>
> On 25/04/13 12:28, Mark Payne wrote:
>> bevholtAR1 works, but not rickerAR1
>>
>>> model(nsher) <- rickerAR1
>>> mdl <- fmle(nsher)
>> Error in return(FLPar(a = max(exp(res[1])), b = -max(res[2])), rho = 0) :
>>    multi-argument returns are not permitted
>>
>> But what is the difference between these functions and the ones that are documented in the help files?
>>
>> Here's my version info FYI - its the standard install from the repo
>>> packageDescription("FLCore")
>> Package: FLCore
>> Title: Core package of FLR, fisheries modelling in R.
>> Version: 2.4
>> Date: 2011
>> Packaged: 2011-10-14 12:08:14.541 UTC; imosqueira
>> Built: R 2.14.1; i686-pc-linux-gnu; 2013-02-04 10:40:33
>>        UTC; unix
>>
>> Mark
>>
>> ________________________________________
>> Fra:flr-list-bounces at r-forge.wu-wien.ac.at  [flr-list-bounces at r-forge.wu-wien.ac.at] på vegne af Laurie [lauriekell at googlemail.com]
>> Sendt: 25. april 2013 12:10
>> Til:flr-list at flr-project.org
>> Emne: Re: [FLR-list] Missing SR relationships
>>
>> try
>>
>> bevholtAR1()
>> rickerAR1()
>>
>> On 25/04/13 09:51, Mark Payne wrote:
>>> Hi,
>>>
>>> I am trying to fit some stock-recruitment relationships using the FLSR classes - this is the first time that I've played with them, and I have to say, I am very impressed with what you have setup here. However, it seems that there are a few missing that should be there according to the help file. ?SRModels gives me a nice list of the available models, but when I try the classic ar1 models, I get the following errors:
>>>
>>>> data(nsher)
>>>> model(nsher) <- "bevholt.ar1"
>>> Error in do.call(value, list()) : could not find function "bevholt.ar1"
>>>> model(nsher) <- bevholt.ar1()
>>> Error: could not find function "bevholt.ar1"
>>>> model(nsher) <- "ricker.ar1"
>>> Error in do.call(value, list()) : could not find function "ricker.ar1"
>>>> model(nsher) <- ricker.ar1()
>>> Error: could not find function "ricker.ar1"
>>>
>>> Any ideas?
>>>
>>> Mark
>>> _______________________________________________
>>> flr-list mailing list
>>> flr-list at flr-project.org
>>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/flr-list
>> _______________________________________________
>> flr-list mailing list
>> flr-list at flr-project.org
>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/flr-list
>> _______________________________________________
>> flr-list mailing list
>> flr-list at flr-project.org
>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/flr-list
>
>
>
> _______________________________________________
> flr-list mailing list
> flr-list at flr-project.org
> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/flr-list

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/flr-list/attachments/20130514/d939b2d9/attachment-0001.html>


More information about the flr-list mailing list