[Yuima-commits] r177 - in pkg/yuimadocs/inst/doc: . JSS JSSstyle

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Fri Sep 9 05:43:24 CEST 2011


Author: iacus
Date: 2011-09-09 05:43:22 +0200 (Fri, 09 Sep 2011)
New Revision: 177

Added:
   pkg/yuimadocs/inst/doc/JSS/
   pkg/yuimadocs/inst/doc/JSS/article.tex
   pkg/yuimadocs/inst/doc/JSS/jss.cls
   pkg/yuimadocs/inst/doc/JSS/jsslogo.jpg
   pkg/yuimadocs/inst/doc/JSSstyle/
   pkg/yuimadocs/inst/doc/JSSstyle/README
   pkg/yuimadocs/inst/doc/JSSstyle/article.tex
   pkg/yuimadocs/inst/doc/JSSstyle/codesnippet.tex
   pkg/yuimadocs/inst/doc/JSSstyle/jss.bst
   pkg/yuimadocs/inst/doc/JSSstyle/jss.cls
   pkg/yuimadocs/inst/doc/JSSstyle/jss.dbj
   pkg/yuimadocs/inst/doc/JSSstyle/jss.drv
   pkg/yuimadocs/inst/doc/JSSstyle/jss.dtx
   pkg/yuimadocs/inst/doc/JSSstyle/jss.ins
   pkg/yuimadocs/inst/doc/JSSstyle/jss.pdf
   pkg/yuimadocs/inst/doc/JSSstyle/jsslogo.jpg
Log:
first version of JSS paper

Added: pkg/yuimadocs/inst/doc/JSS/article.tex
===================================================================
--- pkg/yuimadocs/inst/doc/JSS/article.tex	                        (rev 0)
+++ pkg/yuimadocs/inst/doc/JSS/article.tex	2011-09-09 03:43:22 UTC (rev 177)
@@ -0,0 +1,63 @@
+\documentclass[article]{jss}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% declarations for jss.cls %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+%% almost as usual
+\author{Achim Zeileis\\Wirtschaftsuniversit\"at Wien \And 
+        Second Author\\Plus Affiliation}
+\title{A Capitalized Title: Something About a Package \pkg{foo}}
+
+%% for pretty printing and a nice hypersummary also set:
+\Plainauthor{Achim Zeileis, Second Author} %% comma-separated
+\Plaintitle{A Capitalized Title: Something About a Package foo} %% without formatting
+\Shorttitle{A Capitalized Title} %% a short title (if necessary)
+
+%% an abstract and keywords
+\Abstract{
+  The abstract of the article.
+}
+\Keywords{keywords, comma-separated, not capitalized, \proglang{Java}}
+\Plainkeywords{keywords, comma-separated, not capitalized, Java} %% without formatting
+%% at least one keyword must be supplied
+
+%% publication information
+%% NOTE: Typically, this can be left commented and will be filled out by the technical editor
+%% \Volume{13}
+%% \Issue{9}
+%% \Month{September}
+%% \Year{2004}
+%% \Submitdate{2004-09-29}
+%% \Acceptdate{2004-09-29}
+
+%% The address of (at least) one author should be given
+%% in the following format:
+\Address{
+  Achim Zeileis\\
+  Department f\"ur Statistik \& Mathematik\\
+  Wirtschaftsuniversit\"at Wien\\
+  1090 Wien, Austria\\
+  E-mail: \email{Achim.Zeileis at wu-wien.ac.at}\\
+  URL: \url{http://statmath.wu-wien.ac.at/~zeileis/}
+}
+%% It is also possible to add a telephone and fax number
+%% before the e-mail in the following format:
+%% Telephone: +43/1/31336-5053
+%% Fax: +43/1/31336-734
+
+%% for those who use Sweave please include the following line (with % symbols):
+%% need no \usepackage{Sweave.sty}
+
+%% end of declarations %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+
+\begin{document}
+
+%% include your article here, just as usual
+%% Note that you should use the \pkg{}, \proglang{} and \code{} commands.
+
+\section[About Java]{About \proglang{Java}}
+%% Note: If there is markup in \(sub)section, then it has to be escape as above.
+
+\end{document}

Added: pkg/yuimadocs/inst/doc/JSS/jss.cls
===================================================================
--- pkg/yuimadocs/inst/doc/JSS/jss.cls	                        (rev 0)
+++ pkg/yuimadocs/inst/doc/JSS/jss.cls	2011-09-09 03:43:22 UTC (rev 177)
@@ -0,0 +1,487 @@
+%%
+%% This is file `jss.cls',
+%% generated with the docstrip utility.
+%%
+%% The original source files were:
+%%
+%% jss.dtx  (with options: `class')
+%% 
+%% IMPORTANT NOTICE:
+%% 
+%% For the copyright see the source file.
+%% 
+%% Any modified versions of this file must be renamed
+%% with new filenames distinct from jss.cls.
+%% 
+%% For distribution of the original source see the terms
+%% for copying and modification in the file jss.dtx.
+%% 
+%% This generated file may be distributed as long as the
+%% original source files, as listed above, are part of the
+%% same distribution. (The sources need not necessarily be
+%% in the same archive or directory.)
+\def\fileversion{2.0}
+\def\filename{jss}
+\def\filedate{2009/09/24}
+%%
+%% Package `jss' to use with LaTeX2e for JSS publications (http://www.jstatsoft.org/)
+%% License: GPL-2
+%% Copyright: (C) Achim Zeileis
+%% Please report errors to Achim.Zeileis at R-project.org
+%%
+\NeedsTeXFormat{LaTeX2e}
+\ProvidesClass{jss}[\filedate\space\fileversion\space jss class by Achim Zeileis]
+%% options
+\newif\if at article
+\newif\if at codesnippet
+\newif\if at bookreview
+\newif\if at softwarereview
+\newif\if at review
+\newif\if at shortnames
+\newif\if at nojss
+\newif\if at notitle
+\newif\if at noheadings
+
+\@articletrue
+\@codesnippetfalse
+\@bookreviewfalse
+\@softwarereviewfalse
+\@reviewfalse
+\@shortnamesfalse
+\@nojssfalse
+\@notitlefalse
+\@noheadingsfalse
+
+\DeclareOption{article}{\@articletrue%
+  \@codesnippetfalse \@bookreviewfalse \@softwarereviewfalse}
+\DeclareOption{codesnippet}{\@articlefalse%
+  \@codesnippettrue \@bookreviewfalse \@softwarereviewfalse}
+\DeclareOption{bookreview}{\@articlefalse%
+  \@codesnippetfalse \@bookreviewtrue \@softwarereviewfalse}
+\DeclareOption{softwarereview}{\@articlefalse%
+  \@codesnippetfalse \@bookreviewfalse \@softwarereviewtrue}
+\DeclareOption{shortnames}{\@shortnamestrue}
+\DeclareOption{nojss}{\@nojsstrue}
+\DeclareOption{notitle}{\@notitletrue}
+\DeclareOption{noheadings}{\@noheadingstrue}
+
+\ProcessOptions
+\LoadClass[11pt,a4paper,twoside]{article}
+%% required packages
+\RequirePackage{graphicx,a4wide,color,ae,fancyvrb}
+\RequirePackage[T1]{fontenc}
+\IfFileExists{upquote.sty}{\RequirePackage{upquote}}{}
+%% bibliography
+\if at shortnames
+  \usepackage[authoryear,round]{natbib}
+\else
+  \usepackage[authoryear,round,longnamesfirst]{natbib}
+\fi
+\bibpunct{(}{)}{;}{a}{}{,}
+\bibliographystyle{jss}
+%% paragraphs
+\setlength{\parskip}{0.7ex plus0.1ex minus0.1ex}
+\setlength{\parindent}{0em}
+%% for all publications
+\newcommand{\Address}[1]{\def\@Address{#1}}
+\newcommand{\Plaintitle}[1]{\def\@Plaintitle{#1}}
+\newcommand{\Shorttitle}[1]{\def\@Shorttitle{#1}}
+\newcommand{\Plainauthor}[1]{\def\@Plainauthor{#1}}
+\newcommand{\Volume}[1]{\def\@Volume{#1}}
+\newcommand{\Year}[1]{\def\@Year{#1}}
+\newcommand{\Month}[1]{\def\@Month{#1}}
+\newcommand{\Issue}[1]{\def\@Issue{#1}}
+\newcommand{\Submitdate}[1]{\def\@Submitdate{#1}}
+%% for articles and code snippets
+\newcommand{\Acceptdate}[1]{\def\@Acceptdate{#1}}
+\newcommand{\Abstract}[1]{\def\@Abstract{#1}}
+\newcommand{\Keywords}[1]{\def\@Keywords{#1}}
+\newcommand{\Plainkeywords}[1]{\def\@Plainkeywords{#1}}
+%% for book and software reviews
+\newcommand{\Reviewer}[1]{\def\@Reviewer{#1}}
+\newcommand{\Booktitle}[1]{\def\@Booktitle{#1}}
+\newcommand{\Bookauthor}[1]{\def\@Bookauthor{#1}}
+\newcommand{\Publisher}[1]{\def\@Publisher{#1}}
+\newcommand{\Pubaddress}[1]{\def\@Pubaddress{#1}}
+\newcommand{\Pubyear}[1]{\def\@Pubyear{#1}}
+\newcommand{\ISBN}[1]{\def\@ISBN{#1}}
+\newcommand{\Pages}[1]{\def\@Pages{#1}}
+\newcommand{\Price}[1]{\def\@Price{#1}}
+\newcommand{\Plainreviewer}[1]{\def\@Plainreviewer{#1}}
+\newcommand{\Softwaretitle}[1]{\def\@Softwaretitle{#1}}
+\newcommand{\URL}[1]{\def\@URL{#1}}
+%% for internal use
+\newcommand{\Seriesname}[1]{\def\@Seriesname{#1}}
+\newcommand{\Hypersubject}[1]{\def\@Hypersubject{#1}}
+\newcommand{\Hyperauthor}[1]{\def\@Hyperauthor{#1}}
+\newcommand{\Footername}[1]{\def\@Footername{#1}}
+\newcommand{\Firstdate}[1]{\def\@Firstdate{#1}}
+\newcommand{\Seconddate}[1]{\def\@Seconddate{#1}}
+\newcommand{\Reviewauthor}[1]{\def\@Reviewauthor{#1}}
+%% defaults
+\author{Firstname Lastname\\Affiliation}
+\title{Title}
+\Abstract{---!!!---an abstract is required---!!!---}
+\Plainauthor{\@author}
+\Volume{VV}
+\Year{YYYY}
+\Month{MMMMMM}
+\Issue{II}
+\Submitdate{yyyy-mm-dd}
+\Acceptdate{yyyy-mm-dd}
+\Address{
+  Firstname Lastname\\
+  Affiliation\\
+  Address, Country\\
+  E-mail: \email{name at address}\\
+  URL: \url{http://link/to/webpage/}
+}
+
+\Reviewer{Firstname Lastname\\Affiliation}
+\Plainreviewer{Firstname Lastname}
+\Booktitle{Book Title}
+\Bookauthor{Book Author}
+\Publisher{Publisher}
+\Pubaddress{Publisher's Address}
+\Pubyear{YYY}
+\ISBN{x-xxxxx-xxx-x}
+\Pages{xv + 123}
+\Price{USD 69.95 (P)}
+\URL{http://link/to/webpage/}
+\if at article
+  \Seriesname{Issue}
+  \Hypersubject{Journal of Statistical Software}
+  \Plaintitle{\@title}
+  \Shorttitle{\@title}
+  \Plainkeywords{\@Keywords}
+\fi
+
+\if at codesnippet
+  \Seriesname{Code Snippet}
+  \Hypersubject{Journal of Statistical Software -- Code Snippets}
+  \Plaintitle{\@title}
+  \Shorttitle{\@title}
+  \Plainkeywords{\@Keywords}
+\fi
+
+\if at bookreview
+  \Seriesname{Book Review}
+  \Hypersubject{Journal of Statistical Software -- Book Reviews}
+  \Plaintitle{\@Booktitle}
+  \Shorttitle{\@Booktitle}
+  \Reviewauthor{\@Bookauthor\\
+                \@Publisher, \@Pubaddress, \@Pubyear.\\
+                ISBN~\@ISBN. \@Pages~pp. \@Price.\\
+                \url{\@URL}}
+  \Plainkeywords{}
+  \@reviewtrue
+\fi
+
+\if at softwarereview
+  \Seriesname{Software Review}
+  \Hypersubject{Journal of Statistical Software -- Software Reviews}
+  \Plaintitle{\@Softwaretitle}
+  \Shorttitle{\@Softwaretitle}
+  \Booktitle{\@Softwaretitle}
+  \Reviewauthor{\@Publisher, \@Pubaddress. \@Price.\\
+                \url{\@URL}}
+  \Plainkeywords{}
+  \@reviewtrue
+\fi
+
+\if at review
+  \Hyperauthor{\@Plainreviewer}
+  \Keywords{}
+  \Footername{Reviewer}
+  \Firstdate{\textit{Published:} \@Submitdate}
+  \Seconddate{}
+\else
+  \Hyperauthor{\@Plainauthor}
+  \Keywords{---!!!---at least one keyword is required---!!!---}
+  \Footername{Affiliation}
+  \Firstdate{\textit{Submitted:} \@Submitdate}
+  \Seconddate{\textit{Accepted:} \@Acceptdate}
+\fi
+%% Sweave(-like)
+\DefineVerbatimEnvironment{Sinput}{Verbatim}{fontshape=sl}
+\DefineVerbatimEnvironment{Soutput}{Verbatim}{}
+\DefineVerbatimEnvironment{Scode}{Verbatim}{fontshape=sl}
+\newenvironment{Schunk}{}{}
+\DefineVerbatimEnvironment{Code}{Verbatim}{}
+\DefineVerbatimEnvironment{CodeInput}{Verbatim}{fontshape=sl}
+\DefineVerbatimEnvironment{CodeOutput}{Verbatim}{}
+\newenvironment{CodeChunk}{}{}
+\setkeys{Gin}{width=0.8\textwidth}
+%% footer
+\newlength{\footerskip}
+\setlength{\footerskip}{2.5\baselineskip plus 2ex minus 0.5ex}
+
+\newcommand{\makefooter}{%
+  \vspace{\footerskip}
+
+  \if at nojss
+    \begin{samepage}
+    \textbf{\large \@Footername: \nopagebreak}\\[.3\baselineskip] \nopagebreak
+    \@Address \nopagebreak
+    \end{samepage}
+  \else
+    \begin{samepage}
+    \textbf{\large \@Footername: \nopagebreak}\\[.3\baselineskip] \nopagebreak
+    \@Address \nopagebreak
+    \vfill
+    \hrule \nopagebreak
+    \vspace{.1\baselineskip}
+    {\fontfamily{pzc} \fontsize{13}{15} \selectfont Journal of Statistical Software}
+    \hfill
+    \url{http://www.jstatsoft.org/}\\ \nopagebreak
+    published by the American Statistical Association
+    \hfill
+    \url{http://www.amstat.org/}\\[.3\baselineskip] \nopagebreak
+    {Volume~\@Volume, \@Seriesname~\@Issue}
+    \hfill
+    \@Firstdate\\ \nopagebreak
+    {\@Month{} \@Year}
+    \hfill
+    \@Seconddate  \nopagebreak
+    \vspace{.3\baselineskip}
+    \hrule
+    \end{samepage}
+  \fi
+}
+\AtEndDocument{\makefooter}
+%% required packages
+\RequirePackage{hyperref}
+%% new \maketitle
+\def\@myoddhead{
+  {\color{white} JSS}\\[-1.42cm]
+  \hspace{-2em} \includegraphics[height=23mm,keepaspectratio]{jsslogo} \hfill
+  \parbox[b][23mm]{118mm}{\hrule height 3pt
+   \center{
+   {\fontfamily{pzc} \fontsize{28}{32} \selectfont Journal of Statistical Software}
+   \vfill
+   {\it \small \@Month{} \@Year, Volume~\@Volume, \@Seriesname~\@Issue.%
+            \hfill \href{http://www.jstatsoft.org/}{http://www.jstatsoft.org/}}}\\[0.1cm]
+     \hrule height 3pt}}
+\if at review
+  \renewcommand{\maketitle}{
+  \if at nojss
+    %% \@oddhead{\@myoddhead}\\[3\baselineskip]
+  \else
+    \@oddhead{\@myoddhead}\\[3\baselineskip]
+  \fi
+    {\large
+    \noindent
+    Reviewer: \@Reviewer
+    \vspace{\baselineskip}
+    \hrule
+    \vspace{\baselineskip}
+    \textbf{\@Booktitle}
+    \begin{quotation} \noindent
+    \@Reviewauthor
+    \end{quotation}
+    \vspace{0.7\baselineskip}
+    \hrule
+    \vspace{1.3\baselineskip}
+    }
+
+    \thispagestyle{empty}
+    \if at nojss
+      \markboth{\centerline{\@Shorttitle}}{\centerline{\@Hyperauthor}}
+    \else
+      \markboth{\centerline{\@Shorttitle}}{\centerline{\@Hypersubject}}
+    \fi
+    \pagestyle{myheadings}
+  }
+\else
+  \def\maketitle{
+  \if at nojss
+    %% \@oddhead{\@myoddhead} \par
+  \else
+    \@oddhead{\@myoddhead} \par
+  \fi
+   \begingroup
+     \def\thefootnote{\fnsymbol{footnote}}
+     \def\@makefnmark{\hbox to 0pt{$^{\@thefnmark}$\hss}}
+     \long\def\@makefntext##1{\parindent 1em\noindent
+                              \hbox to1.8em{\hss $\m at th ^{\@thefnmark}$}##1}
+     \@maketitle \@thanks
+   \endgroup
+   \setcounter{footnote}{0}
+
+   \if at noheadings
+    %% \markboth{\centerline{\@Shorttitle}}{\centerline{\@Hypersubject}}
+    \else
+     \thispagestyle{empty}
+      \if at nojss
+        \markboth{\centerline{\@Shorttitle}}{\centerline{\@Hyperauthor}}
+      \else
+        \markboth{\centerline{\@Shorttitle}}{\centerline{\@Hypersubject}}
+      \fi
+     \pagestyle{myheadings}
+   \fi
+
+   \let\maketitle\relax \let\@maketitle\relax
+   \gdef\@thanks{}\gdef\@author{}\gdef\@title{}\let\thanks\relax
+  }
+
+  \def\@maketitle{\vbox{\hsize\textwidth \linewidth\hsize
+  \if at nojss
+    %% \vskip 1in
+  \else
+    \vskip 1in
+  \fi
+   {\centering
+   {\LARGE\bf \@title\par}
+   \vskip 0.2in plus 1fil minus 0.1in
+   {
+       \def\and{\unskip\enspace{\rm and}\enspace}%
+       \def\And{\end{tabular}\hss \egroup \hskip 1in plus 2fil
+          \hbox to 0pt\bgroup\hss \begin{tabular}[t]{c}\large\bf\rule{\z@}{24pt}\ignorespaces}%
+       \def\AND{\end{tabular}\hss\egroup \hfil\hfil\egroup
+          \vskip 0.1in plus 1fil minus 0.05in
+          \hbox to \linewidth\bgroup\rule{\z@}{10pt} \hfil\hfil
+          \hbox to 0pt\bgroup\hss \begin{tabular}[t]{c}\large\bf\rule{\z@}{24pt}\ignorespaces}
+       \hbox to \linewidth\bgroup\rule{\z@}{10pt} \hfil\hfil
+       \hbox to 0pt\bgroup\hss \begin{tabular}[t]{c}\large\bf\rule{\z@}{24pt}\@author
+       \end{tabular}\hss\egroup
+   \hfil\hfil\egroup}
+   \vskip 0.3in minus 0.1in
+   \hrule
+   \begin{abstract}
+   \@Abstract
+   \end{abstract}}
+   \textit{Keywords}:~\@Keywords.
+   \vskip 0.1in minus 0.05in
+   \hrule
+   \vskip 0.2in minus 0.1in
+  }}
+\fi
+%% sections, subsections, and subsubsections
+\newlength{\preXLskip}
+\newlength{\preLskip}
+\newlength{\preMskip}
+\newlength{\preSskip}
+\newlength{\postMskip}
+\newlength{\postSskip}
+\setlength{\preXLskip}{1.8\baselineskip plus 0.5ex minus 0ex}
+\setlength{\preLskip}{1.5\baselineskip plus 0.3ex minus 0ex}
+\setlength{\preMskip}{1\baselineskip plus 0.2ex minus 0ex}
+\setlength{\preSskip}{.8\baselineskip plus 0.2ex minus 0ex}
+\setlength{\postMskip}{.5\baselineskip plus 0ex minus 0.1ex}
+\setlength{\postSskip}{.3\baselineskip plus 0ex minus 0.1ex}
+
+\newcommand{\jsssec}[2][default]{\vskip \preXLskip%
+  \pdfbookmark[1]{#1}{Section.\thesection.#1}%
+  \refstepcounter{section}%
+  \centerline{\textbf{\Large \thesection. #2}} \nopagebreak
+  \vskip \postMskip \nopagebreak}
+\newcommand{\jsssecnn}[1]{\vskip \preXLskip%
+  \centerline{\textbf{\Large #1}} \nopagebreak
+  \vskip \postMskip \nopagebreak}
+
+\newcommand{\jsssubsec}[2][default]{\vskip \preMskip%
+  \pdfbookmark[2]{#1}{Subsection.\thesubsection.#1}%
+  \refstepcounter{subsection}%
+  \textbf{\large \thesubsection. #2} \nopagebreak
+  \vskip \postSskip \nopagebreak}
+\newcommand{\jsssubsecnn}[1]{\vskip \preMskip%
+  \textbf{\large #1} \nopagebreak
+  \vskip \postSskip \nopagebreak}
+
+\newcommand{\jsssubsubsec}[2][default]{\vskip \preSskip%
+  \pdfbookmark[3]{#1}{Subsubsection.\thesubsubsection.#1}%
+  \refstepcounter{subsubsection}%
+  {\large \textit{#2}} \nopagebreak
+  \vskip \postSskip \nopagebreak}
+\newcommand{\jsssubsubsecnn}[1]{\vskip \preSskip%
+  {\textit{\large #1}} \nopagebreak
+  \vskip \postSskip \nopagebreak}
+
+\newcommand{\jsssimplesec}[2][default]{\vskip \preLskip%
+%%  \pdfbookmark[1]{#1}{Section.\thesection.#1}%
+  \refstepcounter{section}%
+  \textbf{\large #1} \nopagebreak
+  \vskip \postSskip \nopagebreak}
+\newcommand{\jsssimplesecnn}[1]{\vskip \preLskip%
+  \textbf{\large #1} \nopagebreak
+  \vskip \postSskip \nopagebreak}
+
+\if at review
+  \renewcommand{\section}{\secdef \jsssimplesec \jsssimplesecnn}
+  \renewcommand{\subsection}{\secdef \jsssimplesec \jsssimplesecnn}
+  \renewcommand{\subsubsection}{\secdef \jsssimplesec \jsssimplesecnn}
+\else
+  \renewcommand{\section}{\secdef \jsssec \jsssecnn}
+  \renewcommand{\subsection}{\secdef \jsssubsec \jsssubsecnn}
+  \renewcommand{\subsubsection}{\secdef \jsssubsubsec \jsssubsubsecnn}
+\fi
+%% colors
+\definecolor{Red}{rgb}{0.5,0,0}
+\definecolor{Blue}{rgb}{0,0,0.5}
+\if at review
+  \hypersetup{%
+    hyperindex = {true},
+    colorlinks = {true},
+    linktocpage = {true},
+    plainpages = {false},
+    linkcolor = {Blue},
+    citecolor = {Blue},
+    urlcolor = {Red},
+    pdfstartview = {Fit},
+    pdfpagemode = {None},
+    pdfview = {XYZ null null null}
+  }
+\else
+  \hypersetup{%
+    hyperindex = {true},
+    colorlinks = {true},
+    linktocpage = {true},
+    plainpages = {false},
+    linkcolor = {Blue},
+    citecolor = {Blue},
+    urlcolor = {Red},
+    pdfstartview = {Fit},
+    pdfpagemode = {UseOutlines},
+    pdfview = {XYZ null null null}
+  }
+\fi
+\if at nojss
+  \AtBeginDocument{
+    \hypersetup{%
+      pdfauthor = {\@Hyperauthor},
+      pdftitle = {\@Plaintitle},
+      pdfkeywords = {\@Plainkeywords}
+    }
+  }
+\else
+  \AtBeginDocument{
+    \hypersetup{%
+      pdfauthor = {\@Hyperauthor},
+      pdftitle = {\@Plaintitle},
+      pdfsubject = {\@Hypersubject},
+      pdfkeywords = {\@Plainkeywords}
+    }
+  }
+\fi
+\if at notitle
+  %% \AtBeginDocument{\maketitle}
+\else
+  \AtBeginDocument{\maketitle}
+\fi
+%% commands
+\makeatletter
+\newcommand\code{\bgroup\@makeother\_\@makeother\~\@makeother\$\@codex}
+\def\@codex#1{{\normalfont\ttfamily\hyphenchar\font=-1 #1}\egroup}
+\makeatother
+%%\let\code=\texttt
+\let\proglang=\textsf
+\newcommand{\pkg}[1]{{\fontseries{b}\selectfont #1}}
+\newcommand{\email}[1]{\href{mailto:#1}{\normalfont\texttt{#1}}}
+\newcommand{\doi}[1]{\href{http://dx.doi.org/#1}{\normalfont\texttt{doi:#1}}}
+\newcommand{\E}{\mathsf{E}}
+\newcommand{\VAR}{\mathsf{VAR}}
+\newcommand{\COV}{\mathsf{COV}}
+\newcommand{\Prob}{\mathsf{P}}
+\endinput
+%%
+%% End of file `jss.cls'.

Added: pkg/yuimadocs/inst/doc/JSS/jsslogo.jpg
===================================================================
(Binary files differ)


Property changes on: pkg/yuimadocs/inst/doc/JSS/jsslogo.jpg
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: pkg/yuimadocs/inst/doc/JSSstyle/README
===================================================================
--- pkg/yuimadocs/inst/doc/JSSstyle/README	                        (rev 0)
+++ pkg/yuimadocs/inst/doc/JSSstyle/README	2011-09-09 03:43:22 UTC (rev 177)
@@ -0,0 +1,48 @@
+***************************************************
+** jss: A Document Class for Publications in the **
+**        Journal of Statistical Software        **
+***************************************************
+
+This zip-archive contains the pdfLaTeX infrastructure
+for publications in the Journal of Statistical Software.
+The files
+  - jss.cls (LaTeX2e class)
+  - jss.bst (BibTeX style)
+  - jsslogo.jpg (JPG logo)
+need to be included in your search path (local working
+directory, texmf or localtexmf tree).
+
+A manual how to use jss.cls is provided in
+  - jss.pdf.
+
+Furthermore, there are templates for articles, code
+snippets, book reviews and software reviews available
+in 
+  - article.tex
+  - codesnippet.tex
+  - bookreview.tex
+  - softwarereview.tex
+
+The final version of JSS papers should be prepared using
+JSS styles; the submission of the final version needs to
+include the full sources (.tex, .bib, and all graphics).
+A quick check for the most important aspects of the JSS
+style is given below; authors should make sure that all
+of them are addressed in the final version:  
+  - The manuscript can be compiled by pdfLaTeX.
+  - \proglang, \pkg and \code have been used for highlighting
+    throughout the paper (including titles and references),
+    except where explicitly escaped.
+  - References are provided in a .bib BibTeX database
+    and included in the text by \cite, \citep, \citet,
+    etc.
+  - Titles and headers are formatted as described in
+    the JSS manual:
+      - \title in title style,
+      - \section etc. in sentence style,
+      - all titles in the BibTeX file in title style.
+  - Figures, tables and equations are marked with a \label
+    and referred to by \ref, e.g., "Figure~\ref{...}".
+  - Software packes are \cite{}d properly.
+For more details, see the manual jss.pdf, in particular
+the style checklist in Section 2.1.

Added: pkg/yuimadocs/inst/doc/JSSstyle/article.tex
===================================================================
--- pkg/yuimadocs/inst/doc/JSSstyle/article.tex	                        (rev 0)
+++ pkg/yuimadocs/inst/doc/JSSstyle/article.tex	2011-09-09 03:43:22 UTC (rev 177)
@@ -0,0 +1,63 @@
+\documentclass[article]{jss}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% declarations for jss.cls %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+%% almost as usual
+\author{Achim Zeileis\\Wirtschaftsuniversit\"at Wien \And 
+        Second Author\\Plus Affiliation}
+\title{A Capitalized Title: Something About a Package \pkg{foo}}
+
+%% for pretty printing and a nice hypersummary also set:
+\Plainauthor{Achim Zeileis, Second Author} %% comma-separated
+\Plaintitle{A Capitalized Title: Something About a Package foo} %% without formatting
+\Shorttitle{A Capitalized Title} %% a short title (if necessary)
+
+%% an abstract and keywords
+\Abstract{
+  The abstract of the article.
+}
+\Keywords{keywords, comma-separated, not capitalized, \proglang{Java}}
+\Plainkeywords{keywords, comma-separated, not capitalized, Java} %% without formatting
+%% at least one keyword must be supplied
+
+%% publication information
+%% NOTE: Typically, this can be left commented and will be filled out by the technical editor
+%% \Volume{13}
+%% \Issue{9}
+%% \Month{September}
+%% \Year{2004}
+%% \Submitdate{2004-09-29}
+%% \Acceptdate{2004-09-29}
+
+%% The address of (at least) one author should be given
+%% in the following format:
+\Address{
+  Achim Zeileis\\
+  Department f\"ur Statistik \& Mathematik\\
+  Wirtschaftsuniversit\"at Wien\\
+  1090 Wien, Austria\\
+  E-mail: \email{Achim.Zeileis at wu-wien.ac.at}\\
+  URL: \url{http://statmath.wu-wien.ac.at/~zeileis/}
+}
+%% It is also possible to add a telephone and fax number
+%% before the e-mail in the following format:
+%% Telephone: +43/1/31336-5053
+%% Fax: +43/1/31336-734
+
+%% for those who use Sweave please include the following line (with % symbols):
+%% need no \usepackage{Sweave.sty}
+
+%% end of declarations %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+
+\begin{document}
+
+%% include your article here, just as usual
+%% Note that you should use the \pkg{}, \proglang{} and \code{} commands.
+
+\section[About Java]{About \proglang{Java}}
+%% Note: If there is markup in \(sub)section, then it has to be escape as above.
+
+\end{document}

Added: pkg/yuimadocs/inst/doc/JSSstyle/codesnippet.tex
===================================================================
--- pkg/yuimadocs/inst/doc/JSSstyle/codesnippet.tex	                        (rev 0)
+++ pkg/yuimadocs/inst/doc/JSSstyle/codesnippet.tex	2011-09-09 03:43:22 UTC (rev 177)
@@ -0,0 +1,64 @@
+\documentclass[codesnippet]{jss}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% declarations for jss.cls %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+%% almost as usual
+\author{Achim Zeileis\\Wirtschaftsuniversit\"at Wien \And 
+        Second Author\\Plus Affiliation}
+\title{A Capitalized Title: Possibly Containing More Details}
+
+%% for pretty printing and a nice hypersummary also set:
+\Plainauthor{Achim Zeileis, Second Author} %% comma-separated
+\Plaintitle{A Capitalized Title: Possibly Containing More Details} %% without formatting
+\Shorttitle{A Capitalized Title} %% a short title (if necessary)
+
+%% an abstract and keywords
+\Abstract{
+  Here should be the abstract.
+}
+\Keywords{keywords, comma-separated, not capitalized, \proglang{Java}}
+\Plainkeywords{keywords, comma-separated, not capitalized, Java} %% without formatting
+%% at least one keyword must be supplied
+
+%% publication information
+%% NOTE: Typically, this can be left commented and will be filled out by the technical editor
+%% \Volume{13}
+%% \Issue{9}
+%% \Month{September}
+%% \Year{2004}
+%% \Submitdate{2004-09-29}
+%% \Acceptdate{2004-09-29}
+
+%% The address of (at least) one author should be given
+%% in the following format:
+\Address{
+  Achim Zeileis\\
+  Department f\"ur Statistik \& Mathematik\\
+  Wirtschaftsuniversit\"at Wien\\
+  1090 Wien, Austria\\
+  E-mail: \email{Achim.Zeileis at wu-wien.ac.at}\\
+  URL: \url{http://statmath.wu-wien.ac.at/~zeileis/}
+}
+%% It is also possible to add a telephone and fax number
+%% before the e-mail in the following format:
+%% Telephone: +43/1/31336-5053
+%% Fax: +43/1/31336-734
+
+%% for those who use Sweave please include the following line (with % symbols):
+%% need no \usepackage{Sweave.sty}
+
+%% end of declarations %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+
+\begin{document}
+
+%% include your article here, just as usual
+%% Note that you should use the \pkg{}, \proglang{} and \code{} commands.
+
+\section[About Java]{About \proglang{Java}}
+%% Note: If there is markup in \(sub)section, then it has to be escape as above.
+
+
+\end{document}

Added: pkg/yuimadocs/inst/doc/JSSstyle/jss.bst
===================================================================
--- pkg/yuimadocs/inst/doc/JSSstyle/jss.bst	                        (rev 0)
+++ pkg/yuimadocs/inst/doc/JSSstyle/jss.bst	2011-09-09 03:43:22 UTC (rev 177)
@@ -0,0 +1,1629 @@
+%%
+%% This is file `jss.bst',
+%% generated with the docstrip utility.
+%%
+%% The original source files were:
+%%
+%% merlin.mbs  (with options: `ay,nat,nm-rvx,keyxyr,dt-beg,yr-par,note-yr,tit-qq,atit-u,trnum-it,vol-bf,volp-com,num-xser,pre-edn,isbn,issn,edpar,pp,ed,xedn,xand,etal-it,revdata,eprint,url,url-blk,doi,nfss')
+%% 
+%% ** BibTeX style file for JSS publications (http://www.jstatsoft.org/)
+%% 
+%% Copyright 1994-2005 Patrick W Daly
+ % ===============================================================
+ % IMPORTANT NOTICE:
+ % This bibliographic style (bst) file has been generated from one or
+ % more master bibliographic style (mbs) files, listed above.
+ %
+ % This generated file can be redistributed and/or modified under the terms
+ % of the LaTeX Project Public License Distributed from CTAN
+ % archives in directory macros/latex/base/lppl.txt; either
+ % version 1 of the License, or any later version.
+ % ===============================================================
+ % Name and version information of the main mbs file:
+ % \ProvidesFile{merlin.mbs}[2005/10/17 4.14 (PWD, AO, DPC)]
+ %   For use with BibTeX version 0.99a or later
+ %-------------------------------------------------------------------
+ % This bibliography style file is intended for texts in ENGLISH
+ % This is an author-year citation style bibliography. As such, it is
+ % non-standard LaTeX, and requires a special package file to function properly.
+ % Such a package is    natbib.sty   by Patrick W. Daly
+ % The form of the \bibitem entries is
+ %   \bibitem[Jones et al.(1990)]{key}...
+ %   \bibitem[Jones et al.(1990)Jones, Baker, and Smith]{key}...
+ % The essential feature is that the label (the part in brackets) consists
+ % of the author names, as they should appear in the citation, with the year
+ % in parentheses following. There must be no space before the opening
+ % parenthesis!
+ % With natbib v5.3, a full list of authors may also follow the year.
+ % In natbib.sty, it is possible to define the type of enclosures that is
+ % really wanted (brackets or parentheses), but in either case, there must
+ % be parentheses in the label.
+ % The \cite command functions as follows:
+ %   \citet{key} ==>>                Jones et al. (1990)
+ %   \citet*{key} ==>>               Jones, Baker, and Smith (1990)
+ %   \citep{key} ==>>                (Jones et al., 1990)
+ %   \citep*{key} ==>>               (Jones, Baker, and Smith, 1990)
+ %   \citep[chap. 2]{key} ==>>       (Jones et al., 1990, chap. 2)
+ %   \citep[e.g.][]{key} ==>>        (e.g. Jones et al., 1990)
+ %   \citep[e.g.][p. 32]{key} ==>>   (e.g. Jones et al., p. 32)
+ %   \citeauthor{key} ==>>           Jones et al.
+ %   \citeauthor*{key} ==>>          Jones, Baker, and Smith
+ %   \citeyear{key} ==>>             1990
+ %---------------------------------------------------------------------
+
+ENTRY
+  { address
+    archive
+    author
+    booktitle
+    chapter
+    collaboration
+    doi
+    edition
+    editor
+    eid
+    eprint
+    howpublished
+    institution
+    isbn
+    issn
+    journal
+    key
+    month
+    note
+    number
+    numpages
+    organization
+    pages
+    publisher
+    school
+    series
+    title
+    type
+    url
+    volume
+    year
+  }
+  {}
+  { label extra.label sort.label short.list }
+INTEGERS { output.state before.all mid.sentence after.sentence after.block }
+FUNCTION {init.state.consts}
+{ #0 'before.all :=
+  #1 'mid.sentence :=
+  #2 'after.sentence :=
+  #3 'after.block :=
+}
+STRINGS { s t}
+FUNCTION {output.nonnull}
+{ 's :=
+  output.state mid.sentence =
+    { ", " * write$ }
+    { output.state after.block =
+        { add.period$ write$
+          newline$
+          "\newblock " write$
+        }
+        { output.state before.all =
+            'write$
+            { add.period$ " " * write$ }
+          if$
+        }
+      if$
+      mid.sentence 'output.state :=
+    }
+  if$
+  s
+}
+FUNCTION {output}
+{ duplicate$ empty$
+    'pop$
+    'output.nonnull
+  if$
+}
+FUNCTION {output.check}
+{ 't :=
+  duplicate$ empty$
+    { pop$ "empty " t * " in " * cite$ * warning$ }
+    'output.nonnull
+  if$
+}
+FUNCTION {fin.entry}
+{ add.period$
+  write$
+  newline$
+}
+
+FUNCTION {new.block}
+{ output.state before.all =
+    'skip$
+    { after.block 'output.state := }
+  if$
+}
+FUNCTION {new.sentence}
+{ output.state after.block =
+    'skip$
+    { output.state before.all =
+        'skip$
+        { after.sentence 'output.state := }
+      if$
+    }
+  if$
+}
+FUNCTION {add.blank}
+{  " " * before.all 'output.state :=
+}
+
+FUNCTION {date.block}
+{
+  new.block
+}
+
+FUNCTION {not}
+{   { #0 }
+    { #1 }
+  if$
+}
+FUNCTION {and}
+{   'skip$
+    { pop$ #0 }
+  if$
+}
+FUNCTION {or}
+{   { pop$ #1 }
+    'skip$
+  if$
+}
+FUNCTION {non.stop}
+{ duplicate$
+   "}" * add.period$
+   #-1 #1 substring$ "." =
+}
+
+STRINGS {z}
+FUNCTION {remove.dots}
+{ 'z :=
+  ""
+  { z empty$ not }
+  { z #1 #1 substring$
+    z #2 global.max$ substring$ 'z :=
+    duplicate$ "." = 'pop$
+      { * }
+    if$
+  }
+  while$
+}
+FUNCTION {new.block.checkb}
+{ empty$
+  swap$ empty$
+  and
+    'skip$
+    'new.block
+  if$
+}
+FUNCTION {field.or.null}
+{ duplicate$ empty$
+    { pop$ "" }
+    'skip$
+  if$
+}
+FUNCTION {emphasize}
+{ duplicate$ empty$
+    { pop$ "" }
+    { "\emph{" swap$ * "}" * }
+  if$
+}
+FUNCTION {bolden}
+{ duplicate$ empty$
+    { pop$ "" }
+    { "\textbf{" swap$ * "}" * }
+  if$
+}
+FUNCTION {tie.or.space.prefix}
+{ duplicate$ text.length$ #3 <
+    { "~" }
+    { " " }
+  if$
+  swap$
+}
+
+FUNCTION {capitalize}
+{ "u" change.case$ "t" change.case$ }
+
+FUNCTION {space.word}
+{ " " swap$ * " " * }
+ % Here are the language-specific definitions for explicit words.
+ % Each function has a name bbl.xxx where xxx is the English word.
+ % The language selected here is ENGLISH
+FUNCTION {bbl.and}
+{ "and"}
+
+FUNCTION {bbl.etal}
+{ "et~al." }
+
+FUNCTION {bbl.editors}
+{ "eds." }
+
+FUNCTION {bbl.editor}
+{ "ed." }
+
+FUNCTION {bbl.edby}
+{ "edited by" }
+
+FUNCTION {bbl.edition}
+{ "edition" }
+
+FUNCTION {bbl.volume}
+{ "volume" }
+
+FUNCTION {bbl.of}
+{ "of" }
+
+FUNCTION {bbl.number}
+{ "number" }
+
+FUNCTION {bbl.nr}
+{ "no." }
+
+FUNCTION {bbl.in}
+{ "in" }
+
+FUNCTION {bbl.pages}
+{ "pp." }
+
+FUNCTION {bbl.page}
+{ "p." }
+
+FUNCTION {bbl.eidpp}
+{ "pages" }
+
+FUNCTION {bbl.chapter}
+{ "chapter" }
+
+FUNCTION {bbl.techrep}
+{ "Technical Report" }
+
+FUNCTION {bbl.mthesis}
+{ "Master's thesis" }
+
+FUNCTION {bbl.phdthesis}
+{ "Ph.D. thesis" }
+
+MACRO {jan} {"January"}
+
+MACRO {feb} {"February"}
+
+MACRO {mar} {"March"}
+
+MACRO {apr} {"April"}
+
+MACRO {may} {"May"}
+
+MACRO {jun} {"June"}
+
+MACRO {jul} {"July"}
+
+MACRO {aug} {"August"}
+
+MACRO {sep} {"September"}
+
+MACRO {oct} {"October"}
+
+MACRO {nov} {"November"}
+
+MACRO {dec} {"December"}
+
+MACRO {acmcs} {"ACM Computing Surveys"}
+
+MACRO {acta} {"Acta Informatica"}
+
+MACRO {cacm} {"Communications of the ACM"}
+
+MACRO {ibmjrd} {"IBM Journal of Research and Development"}
+
+MACRO {ibmsj} {"IBM Systems Journal"}
+
+MACRO {ieeese} {"IEEE Transactions on Software Engineering"}
+
+MACRO {ieeetc} {"IEEE Transactions on Computers"}
+
+MACRO {ieeetcad}
+ {"IEEE Transactions on Computer-Aided Design of Integrated Circuits"}
+
+MACRO {ipl} {"Information Processing Letters"}
+
+MACRO {jacm} {"Journal of the ACM"}
+
+MACRO {jcss} {"Journal of Computer and System Sciences"}
+
+MACRO {scp} {"Science of Computer Programming"}
+
+MACRO {sicomp} {"SIAM Journal on Computing"}
+
+MACRO {tocs} {"ACM Transactions on Computer Systems"}
+
+MACRO {tods} {"ACM Transactions on Database Systems"}
+
+MACRO {tog} {"ACM Transactions on Graphics"}
+
+MACRO {toms} {"ACM Transactions on Mathematical Software"}
+
+MACRO {toois} {"ACM Transactions on Office Information Systems"}
+
+MACRO {toplas} {"ACM Transactions on Programming Languages and Systems"}
+
+MACRO {tcs} {"Theoretical Computer Science"}
+FUNCTION {bibinfo.check}
+{ swap$
+  duplicate$ missing$
+    {
+      pop$ pop$
+      ""
+    }
+    { duplicate$ empty$
+        {
+          swap$ pop$
+        }
+        { swap$
+          pop$
+        }
+      if$
+    }
+  if$
+}
[TRUNCATED]

To get the complete diff run:
    svnlook diff /svnroot/yuima -r 177


More information about the Yuima-commits mailing list