[Vegan-commits] r2190 - www

[noreply at r-forge.r-project.org]

Author: jarioksa
Date: 2012-05-26 07:39:17 +0200 (Sat, 26 May 2012)
New Revision: 2190

Modified:
   www/NEWS.html
Log:
update NEWS.html

Modified: www/NEWS.html
===================================================================
--- www/NEWS.html	2012-05-26 05:35:44 UTC (rev 2189)
+++ www/NEWS.html	2012-05-26 05:39:17 UTC (rev 2190)
@@ -45,7 +45,7 @@
 documents urge users to verify that the aspect ratio is
 reasonably equal and the graph looks like a cube.
 </p>
-</ul>
+</li></ul>
 
 
 
@@ -73,7 +73,21 @@
 <li> <p><code>msoplot</code> is more configurable, and allows, for
 instance, setting y-axis limits.
 </p>
-</ul>
+</li>
+<li><p> Hulls and ellipses are now filled using semitransparent
+colours in <code>ordihull</code> and <code>ordiellipse</code>, and the
+user can set the degree of transparency with a new argument
+<code>alpha</code>.  The filled shapes are used when these functions
+are called with argument <code>draw = "polygon"</code>.  Function
+<code>ordihull</code> puts labels (with argument <code>label = TRUE</code>)
+now in the real polygon centre.
+</p>
+</li>
+<li><p> Function <code>ordipointlabel</code> gained argument to
+<code>select</code> only some of the items for plotting. The
+argument can be used only with one set of points.
+</p>
+</li></ul>
 
  
 
@@ -110,7 +124,7 @@
 <a href="https://github.com/jarioksa/vegan">GitHub</a>
 by Eduard Szöcs (Uni Landau, Germany).
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -142,7 +156,7 @@
 was reported as an error in <code>ordiplot</code> in
 <a href="https://stat.ethz.ch/pipermail/r-sig-ecology/2012-February/002768.html">R-sig-ecology</a> mailing list.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -183,7 +197,7 @@
 intensity. Thanks to consultation to Yong Cao (Univ Illinois,
 USA).
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -225,7 +239,7 @@
 speed-up in the internal f.test() function is fully
 realised. Reported by Nicholas Lewin-Koh.
 </p>
-</ul>
+</li></ul>
 
   
 
@@ -245,7 +259,7 @@
 are class centroids of each point, but for constrained ordination
 with no <code>groups</code> they are the LC scores.
 </p>
-</ul>
+</li></ul>
 		 
   
 
@@ -286,7 +300,7 @@
 [<a href="http://www.esajournals.org/doi/abs/10.1890/ES10-00117.1">doi:10.1890/ES10-00117.1</a>],
 and was developed with the consultation of Brian Inouye.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -325,7 +339,7 @@
 results but you probably wish to upgrade <span class="pkg">vegan</span> to avoid
 annoying warnings.
 </p>
-</ul>
+</li></ul>
 	
  
 
@@ -340,7 +354,7 @@
 showed that in most cases an improved ordering was found rather
 early in tries, and the results are equally good in most cases.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -376,7 +390,7 @@
 <span class="pkg">permute</span>, but currently only <code>betadisper</code> uses the new
 feature. 
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -432,7 +446,7 @@
 were implemented because they were found good for species-area
 models by Dengler (<EM>J. Biogeogr.</EM> 36, 728-744; 2009).
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -474,7 +488,7 @@
 the length of the <code>pool</code> matches the number of
 observations.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -493,7 +507,7 @@
 was not intended for normal use, but packages depending on that
 code in <span class="pkg">vegan</span> should instead depend on <span class="pkg">permute</span>.
 </p>
-</ul>
+</li></ul>
   
  
 
@@ -506,7 +520,7 @@
 <li> <p><code>treeheight</code> uses much snappier code. The results
 should be unchanged.
 </p>
-</ul>
+</li></ul>