[Vegan-commits] r2164 - in pkg/vegan: inst man

[noreply at r-forge.r-project.org]

Author: psolymos
Date: 2012-05-11 08:06:43 +0200 (Fri, 11 May 2012)
New Revision: 2164

Modified:
   pkg/vegan/inst/ChangeLog
   pkg/vegan/man/nullmodel.Rd
Log:
documenting: changing behaviour of update method

Modified: pkg/vegan/inst/ChangeLog
===================================================================
--- pkg/vegan/inst/ChangeLog	2012-05-11 06:06:16 UTC (rev 2163)
+++ pkg/vegan/inst/ChangeLog	2012-05-11 06:06:43 UTC (rev 2164)
@@ -4,6 +4,9 @@
 
 Version 2.1-15 (opened April 24, 2012)
 
+	* update.nullmodel: explicit assignment is required to update
+	the input object (nm <- update(nm, ...)).
+
 	* rrarefy, drarefy: check the data are integers -- the functions
 	do not give sensible results with real values.
 

Modified: pkg/vegan/man/nullmodel.Rd
===================================================================
--- pkg/vegan/man/nullmodel.Rd	2012-05-11 06:06:16 UTC (rev 2163)
+++ pkg/vegan/man/nullmodel.Rd	2012-05-11 06:06:43 UTC (rev 2164)
@@ -161,7 +161,7 @@
 
 ## sequential nullmodel with separate initial burnin
 (nm <- nullmodel(x, "swap"))
-update(nm, nsim=10)
+nm <- update(nm, nsim=10)
 (sm2 <- simulate(nm, nsim=10, thin=5))
 }
 \keyword{ multivariate }