[Vegan-commits] r2136 - www

[noreply at r-forge.r-project.org]

Author: jarioksa
Date: 2012-04-17 14:15:15 +0200 (Tue, 17 Apr 2012)
New Revision: 2136

Modified:
   www/NEWS.html
Log:
update NEWS.html

Modified: www/NEWS.html
===================================================================
--- www/NEWS.html	2012-04-17 12:10:45 UTC (rev 2135)
+++ www/NEWS.html	2012-04-17 12:15:15 UTC (rev 2136)
@@ -8,6 +8,40 @@
 
 <h2>vegan News</h2>
 
+<h3>Changes in version 2.0-4</h3>
+
+
+
+
+<h4>BUG FIXES</h4>
+
+
+
+<ul>
+<li> <p><code>anova(<prc-object>, by = "axis")</code> and other
+<code>by</code> cases failed due to ‘<span class="file">NAMESPACE</span>’ issues.
+</p>
+</li>
+<li> <p><code>envfit</code> failed with unused factor levels.
+</p>
+</li></ul>
+
+
+
+
+<h4>NEW FEATURES</h4>
+
+
+
+<ul>
+<li> <p><code>msoplot</code> is more configurable, and allows, for
+instance, setting y-axis limits.
+</p>
+</li></ul>
+
+ 
+
+
 <h3>Changes in version 2.0-3</h3>
 
 
@@ -38,9 +72,9 @@
 Bray-Curtis dissimilarity index to contributions by individual
 species.  The code was developed in 
 <a href="https://github.com/jarioksa/vegan">GitHub</a>
-by Eduard Szöcz (Uni Landau, Germany).
+by Eduard Szöcs (Uni Landau, Germany).
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -72,7 +106,7 @@
 was reported as an error in <code>ordiplot</code> in
 <a href="https://stat.ethz.ch/pipermail/r-sig-ecology/2012-February/002768.html">R-sig-ecology</a> mailing list.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -113,7 +147,7 @@
 intensity. Thanks to consultation to Yong Cao (Univ Illinois,
 USA).
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -155,7 +189,7 @@
 speed-up in the internal f.test() function is fully
 realised. Reported by Nicholas Lewin-Koh.
 </p>
-</ul>
+</li></ul>
 
   
 
@@ -175,7 +209,7 @@
 are class centroids of each point, but for constrained ordination
 with no <code>groups</code> they are the LC scores.
 </p>
-</ul>
+</li></ul>
 		 
   
 
@@ -216,7 +250,7 @@
 [<a href="http://www.esajournals.org/doi/abs/10.1890/ES10-00117.1">doi:10.1890/ES10-00117.1</a>],
 and was developed with the consultation of Brian Inouye.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -255,7 +289,7 @@
 results but you probably wish to upgrade <span class="pkg">vegan</span> to avoid
 annoying warnings.
 </p>
-</ul>
+</li></ul>
 	
  
 
@@ -270,7 +304,7 @@
 showed that in most cases an improved ordering was found rather
 early in tries, and the results are equally good in most cases.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -306,7 +340,7 @@
 <span class="pkg">permute</span>, but currently only <code>betadisper</code> uses the new
 feature. 
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -362,7 +396,7 @@
 were implemented because they were found good for species-area
 models by Dengler (<EM>J. Biogeogr.</EM> 36, 728-744; 2009).
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -404,7 +438,7 @@
 the length of the <code>pool</code> matches the number of
 observations.
 </p>
-</ul>
+</li></ul>
 
  
 
@@ -423,7 +457,7 @@
 was not intended for normal use, but packages depending on that
 code in <span class="pkg">vegan</span> should instead depend on <span class="pkg">permute</span>.
 </p>
-</ul>
+</li></ul>
   
  
 
@@ -436,7 +470,7 @@
 <li> <p><code>treeheight</code> uses much snappier code. The results
 should be unchanged.
 </p>
-</ul>
+</li></ul>