[Vegan-commits] r1904 - branches/2.0/inst
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Tue Sep 27 16:25:36 CEST 2011
Author: jarioksa
Date: 2011-09-27 16:25:35 +0200 (Tue, 27 Sep 2011)
New Revision: 1904
Modified:
branches/2.0/inst/NEWS.Rd
Log:
proofread NEWS
Modified: branches/2.0/inst/NEWS.Rd
===================================================================
--- branches/2.0/inst/NEWS.Rd 2011-09-27 14:18:50 UTC (rev 1903)
+++ branches/2.0/inst/NEWS.Rd 2011-09-27 14:25:35 UTC (rev 1904)
@@ -6,21 +6,21 @@
\subsection{NEW FUNCTIONS}{
\itemize{
- \item \code{clamtest}: new function for the to classify species
- as generalists and specialists in two distinct habitats (CLAM
- test of Chazdon et al., \emph{Ecology} 92, 1332--1343; 2011).
- The test is based on multinomial distribution of individuals in
- two habitat types or sampling units, and is applicable only to
- count data with no over-dispersion.
+ \item \code{clamtest}: new function to classify species as
+ generalists and specialists in two distinct habitats (CLAM test
+ of Chazdon et al., \emph{Ecology} 92, 1332--1343; 2011). The
+ test is based on multinomial distribution of individuals in two
+ habitat types or sampling units, and is applicable only to count
+ data with no over-dispersion.
\item \code{raupcrick}: new function to implement Raup-Crick
dissimilarity as a probability of number of co-occurring species
with occurrence probabilities proportional to species
frequencies. \pkg{Vegan} has Raup-Crick index as a choice in
\code{vegdist}, but it uses equal sampling probabilities for
- species and exact analytic equations. The new \code{raupcrick}
+ species and analytic equations. The new \code{raupcrick}
function uses simulation with \code{oecosimu}. The function
- follows Chase et al. (2011) \emph{Ecoshpere} 2:art24
+ follows Chase et al. (2011) \emph{Ecosphere} 2:art24
[doi:10.1890/ES10-00117.1], and was developed with the
consultation of Brian Inouye.
@@ -35,7 +35,7 @@
was reported by Dr Miguel Alvarez (Univ. Bonn).
\item Function \code{permatswap} for community null models using
- quantitative swap never swapped items in a \eqn{2 \times 2}{2x2}
+ quantitative swap never swapped items in a \eqn{2 \times 2}{2 by 2}
submatrix if all cells were filled.
}
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