[Vegan-commits] r1844 - pkg/vegan/tests/Examples

[noreply at r-forge.r-project.org]

Author: jarioksa
Date: 2011-09-14 11:44:57 +0200 (Wed, 14 Sep 2011)
New Revision: 1844

Modified:
   pkg/vegan/tests/Examples/vegan-Ex.Rout.save
Log:
update for r1838

Modified: pkg/vegan/tests/Examples/vegan-Ex.Rout.save
===================================================================
--- pkg/vegan/tests/Examples/vegan-Ex.Rout.save	2011-09-13 07:02:28 UTC (rev 1843)
+++ pkg/vegan/tests/Examples/vegan-Ex.Rout.save	2011-09-14 09:44:57 UTC (rev 1844)
@@ -150,7 +150,7 @@
 > mod <- monoMDS(vegdist(varespec))
 > mod <- with(varechem, MDSrotate(mod, pH))
 > plot(mod)
-> ef <- envfit(mod ~ pH, varechem)
+> ef <- envfit(mod ~ pH, varechem, permutations = 0)
 > plot(ef)
 > ordisurf(mod ~ pH, varechem, knots = 1, add = TRUE)
 Loading required package: mgcv
@@ -161,7 +161,7 @@
 
 Formula:
 y ~ poly(x1, 1) + poly(x2, 1)
-<environment: 0x100edc878>
+<environment: 0x10221d350>
 Total model degrees of freedom 3 
 
 GCV score: 0.0427924
@@ -4819,7 +4819,7 @@
 
 Formula:
 y ~ s(x1, x2, k = knots)
-<environment: 0x106b4df48>
+<environment: 0x106d76540>
 
 Estimated degrees of freedom:
 6.4351  total = 7.435071 
@@ -4835,7 +4835,7 @@
 
 Formula:
 y ~ s(x1, x2, k = knots)
-<environment: 0x107b6a898>
+<environment: 0x105526dc8>
 
 Estimated degrees of freedom:
 6.1039  total = 7.103853 
@@ -4991,7 +4991,7 @@
 
 Formula:
 y ~ s(x1, x2, k = knots)
-<environment: 0x1060c2d18>
+<environment: 0x106aa0b90>
 
 Estimated degrees of freedom:
 8.9275  total = 9.927492 
@@ -5004,7 +5004,7 @@
 
 Formula:
 y ~ s(x1, x2, k = knots)
-<environment: 0x106942d50>
+<environment: 0x106b79758>
 
 Estimated degrees of freedom:
 7.7529  total = 8.75294 
@@ -5017,7 +5017,7 @@
 
 Formula:
 y ~ s(x1, x2, k = knots)
-<environment: 0x107c3ce98>
+<environment: 0x106d64b80>
 
 Estimated degrees of freedom:
 8.8962  total = 9.89616 
@@ -7277,7 +7277,7 @@
 
 Formula:
 y ~ s(x1, x2, k = knots)
-<environment: 0x1067a70e0>
+<environment: 0x106f7e208>
 
 Estimated degrees of freedom:
 2  total = 3 
@@ -7753,7 +7753,7 @@
 > ### * <FOOTER>
 > ###
 > cat("Time elapsed: ", proc.time() - get("ptime", pos = 'CheckExEnv'),"\n")
-Time elapsed:  169.337 2.16 177.451 0 0 
+Time elapsed:  159.371 1.809 164.032 0 0 
 > grDevices::dev.off()
 null device 
           1