[Vegan-commits] r1224 - pkg/vegan/man

[noreply at r-forge.r-project.org]

Author: jarioksa
Date: 2010-06-10 08:16:38 +0200 (Thu, 10 Jun 2010)
New Revision: 1224

Modified:
   pkg/vegan/man/kendall.global.Rd
Log:
99 permutations instead of 49

Modified: pkg/vegan/man/kendall.global.Rd
===================================================================
--- pkg/vegan/man/kendall.global.Rd	2010-06-09 07:31:44 UTC (rev 1223)
+++ pkg/vegan/man/kendall.global.Rd	2010-06-10 06:16:38 UTC (rev 1224)
@@ -156,15 +156,15 @@
 
 # Reproduce the results shown in Table 2 of Legendre (2005), a single group
 mite.small <- mite.hel[c(4,9,14,22,31,34,45,53,61,69),c(13:15,23)]
-kendall.global(mite.small, nperm=49)
-kendall.post(mite.small, mult="holm", nperm=49)
+kendall.global(mite.small, nperm=99)
+kendall.post(mite.small, mult="holm", nperm=99)
 
 # Reproduce the results shown in Tables 3 and 4 of Legendre (2005), 2 groups
 group <-c(1,1,2,1,1,1,1,1,2,1,1,1,1,1,1,2,1,2,1,1,1,1,2,1,2,1,1,1,1,1,2,2,2,2,2)
-kendall.global(mite.hel, group=group, nperm=49)
-kendall.post(mite.hel, group=group, mult="holm", nperm=49)
+kendall.global(mite.hel, group=group, nperm=99)
+kendall.post(mite.hel, group=group, mult="holm", nperm=99)
 
-# NOTE: 'nperm' argument usually needs to be larger than 49.
+# NOTE: 'nperm' argument usually needs to be larger than 99.
 # It was set to this low value for demonstration purposes.
 }