[Vegan-commits] r1253 - in pkg/vegan: inst man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Fri Aug 13 12:04:03 CEST 2010
Author: jarioksa
Date: 2010-08-13 12:04:03 +0200 (Fri, 13 Aug 2010)
New Revision: 1253
Modified:
pkg/vegan/inst/ChangeLog
pkg/vegan/man/adipart.Rd
pkg/vegan/man/contribdiv.Rd
pkg/vegan/man/dispindmorisita.Rd
pkg/vegan/man/multipart.Rd
pkg/vegan/man/permatfull.Rd
pkg/vegan/man/tsallis.Rd
Log:
replace \' escape with accented UTF-8 characters
Modified: pkg/vegan/inst/ChangeLog
===================================================================
--- pkg/vegan/inst/ChangeLog 2010-08-13 09:48:38 UTC (rev 1252)
+++ pkg/vegan/inst/ChangeLog 2010-08-13 10:04:03 UTC (rev 1253)
@@ -20,6 +20,8 @@
* msoplot: legend mixed symbols and labels.
+ * Rd (help) files: use real UTF-8 instead of \'-escapes.
+
Version 1.18-8 (closed August 12, 2010)
* DESCRIPTION: does not suggest package 'ellipse'.
Modified: pkg/vegan/man/adipart.Rd
===================================================================
--- pkg/vegan/man/adipart.Rd 2010-08-13 09:48:38 UTC (rev 1252)
+++ pkg/vegan/man/adipart.Rd 2010-08-13 10:04:03 UTC (rev 1253)
@@ -100,7 +100,7 @@
\emph{Oikos}, \bold{76}, 5--13.
}
-\author{\enc{P\'eter S\'olymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
+\author{\enc{Péter Sólymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
\seealso{See \code{\link{oecosimu}} for permutation settings and calculating \eqn{p}-values.}
\examples{
## NOTE: 'nsimul' argument usually needs to be >= 99
Modified: pkg/vegan/man/contribdiv.Rd
===================================================================
--- pkg/vegan/man/contribdiv.Rd 2010-08-13 09:48:38 UTC (rev 1252)
+++ pkg/vegan/man/contribdiv.Rd 2010-08-13 10:04:03 UTC (rev 1253)
@@ -39,7 +39,7 @@
Lu, H. P., Wagner, H. H. and Chen, X. Y. 2007. A contribution diversity approach to evaluate species diversity.
\emph{Basic and Applied Ecology}, 8, 1--12.
}
-\author{\enc{P\'eter S\'olymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
+\author{\enc{Péter Sólymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
\seealso{\code{\link{adipart}}, \code{\link{diversity}}}
\examples{
## Artificial example given in
Modified: pkg/vegan/man/dispindmorisita.Rd
===================================================================
--- pkg/vegan/man/dispindmorisita.Rd 2010-08-13 09:48:38 UTC (rev 1252)
+++ pkg/vegan/man/dispindmorisita.Rd 2010-08-13 10:04:03 UTC (rev 1253)
@@ -80,7 +80,7 @@
Krebs, C. J. 1999. \emph{Ecological Methodology}. 2nd ed. Benjamin
Cummings Publishers. }
-\author{\enc{P\'eter S\'olymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
+\author{\enc{Péter Sólymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
\note{ A common error found in several papers is that when standardizing
as in the case (b), the denominator is given as \code{Muni - 1}. This
Modified: pkg/vegan/man/multipart.Rd
===================================================================
--- pkg/vegan/man/multipart.Rd 2010-08-13 09:48:38 UTC (rev 1252)
+++ pkg/vegan/man/multipart.Rd 2010-08-13 10:04:03 UTC (rev 1253)
@@ -36,7 +36,7 @@
}
\details{
Multiplicative diversity partitioning is based on Whittaker's (1972) ideas, that has
-recently been generalised to one parametric diversity families (i.e. \enc{R\'enyi}{Renyi}
+recently been generalised to one parametric diversity families (i.e. \enc{Rényi}{Renyi}
and Tsallis) by Jost (2006, 2007). Jost recommends to use the numbers equivalents
(Hill numbers), instead of pure diversities, and proofs, that this satisfies the
multiplicative partitioning requirements.
@@ -79,7 +79,7 @@
Whittaker, R. (1972). Evolution and measurement of species diversity.
\emph{Taxon}, \bold{21}, 213--251.
}
-\author{\enc{P\'eter S\'olymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
+\author{\enc{Péter Sólymos}{Peter Solymos}, \email{solymos at ualberta.ca}}
\seealso{See \code{\link{adipart}} for additive diversity partitioning,
\code{\link{hiersimu}} for hierarchical null model testing
and \code{\link{oecosimu}} for permutation settings and calculating \eqn{p}-values.}
Modified: pkg/vegan/man/permatfull.Rd
===================================================================
--- pkg/vegan/man/permatfull.Rd 2010-08-13 09:48:38 UTC (rev 1252)
+++ pkg/vegan/man/permatfull.Rd 2010-08-13 10:04:03 UTC (rev 1253)
@@ -208,7 +208,7 @@
Applied Statistics 30, 91--97.
}
-\author{\enc{P\'eter S\'olymos}{Peter Solymos},
+\author{\enc{Péter Sólymos}{Peter Solymos},
\email{solymos at ualberta.ca} and Jari Oksanen}
\seealso{ For other functions to permute matrices:
Modified: pkg/vegan/man/tsallis.Rd
===================================================================
--- pkg/vegan/man/tsallis.Rd 2010-08-13 09:48:38 UTC (rev 1252)
+++ pkg/vegan/man/tsallis.Rd 2010-08-13 10:04:03 UTC (rev 1253)
@@ -64,7 +64,7 @@
Jost, L (2007) Partitioning diversity into independent alpha and beta components.
\emph{Ecology} \bold{88}, 2427--2439.
}
-\author{\enc{P\'eter S\'olymos}{Peter Solymos}, \email{solymos at ualberta.ca}, based on the code of Roeland Kindt and Jari Oksanen written for \code{renyi}}
+\author{\enc{Péter Sólymos}{Peter Solymos}, \email{solymos at ualberta.ca}, based on the code of Roeland Kindt and Jari Oksanen written for \code{renyi}}
\seealso{
Plotting methods and accumulation routines are based on functions \code{\link{renyi}} and \code{\link{renyiaccum}}. An object of class 'tsallisaccum' can be used with function \code{\link{rgl.renyiaccum}} as well. See also settings for \code{\link{persp}}.
}
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