[Vegan-commits] r238 - in branches/1.11-0: . inst man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Wed Feb 20 08:48:15 CET 2008
Author: jarioksa
Date: 2008-02-20 08:48:15 +0100 (Wed, 20 Feb 2008)
New Revision: 238
Modified:
branches/1.11-0/DESCRIPTION
branches/1.11-0/inst/ChangeLog
branches/1.11-0/man/oecosimu.Rd
Log:
Prepare for the release
Modified: branches/1.11-0/DESCRIPTION
===================================================================
--- branches/1.11-0/DESCRIPTION 2008-02-20 07:12:53 UTC (rev 237)
+++ branches/1.11-0/DESCRIPTION 2008-02-20 07:48:15 UTC (rev 238)
@@ -1,7 +1,7 @@
Package: vegan
Title: Community Ecology Package
Version: 1.11-0
-Date: Feb 15, 2008
+Date: Feb 20, 2008
Author: Jari Oksanen, Roeland Kindt, Pierre Legendre, Bob O'Hara, Gavin L. Simpson,
M. Henry H. Stevens
Maintainer: Jari Oksanen <jari.oksanen at oulu.fi>
Modified: branches/1.11-0/inst/ChangeLog
===================================================================
--- branches/1.11-0/inst/ChangeLog 2008-02-20 07:12:53 UTC (rev 237)
+++ branches/1.11-0/inst/ChangeLog 2008-02-20 07:48:15 UTC (rev 238)
@@ -3,12 +3,12 @@
VEGAN DEVEL VERSIONS at http://r-forge.r-project.org/
-Version 1.12-0 (Released Feb 20, 2008)
+Version 1.11-0 (Released Feb 20, 2008)
* Made a realese branch (1.11-0) based on the the rev. 204, and
- relabelled this devel branch to 1.12-0.
+ relabelled the devel branch to 1.12-0.
- * Removed nestedtemp and associated function: there was an
+ * Removed nestedtemp and associated functions: there was an
implementation error to be fixed in the trunk.
* Added a NEWS file for user visible changes, and updated
Modified: branches/1.11-0/man/oecosimu.Rd
===================================================================
--- branches/1.11-0/man/oecosimu.Rd 2008-02-20 07:12:53 UTC (rev 237)
+++ branches/1.11-0/man/oecosimu.Rd 2008-02-20 07:48:15 UTC (rev 238)
@@ -15,8 +15,8 @@
\description{
Patches or local communities are regarded as nested if they all could
be subsets of the same community. In general, species poor communities
- should be subsets of species rich communities, and rare species only
- should occur on species rich communities. Null models generate random
+ should be subsets of species rich communities, and rare species should
+ only occur in species rich communities. Null models generate random
communities with different criteria to study the significance of
nestedness.
}
@@ -55,7 +55,7 @@
generation of null models is described towards the end of this
section.
- Function \code{netstedchecker} gives the number of checker board
+ Function \code{netstedchecker} gives the number of checkerboard
units, or 2x2 submatrices where both species occur once but on
different sites (Stone & Roberts 1990). Function \code{nestedn0}
implements nestedness measure N0 which is the number of absences
@@ -83,7 +83,7 @@
frequencies as probabilities, and \code{r2} uses squared column
sums. Methods \code{r1} and \code{r2} try to simulate original species
frequencies, but they are not strictly constrained. All these methods
- are surveyed by Wright et al. (1998). Method \code{c0} maintains
+ are reviewed by Wright et al. (1998). Method \code{c0} maintains
species frequencies, but does not honour site (row) frequencies (Jonsson
2001).
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