[Synbreed-news] error running synbreed

Reddy.Thumma at csiro.au Reddy.Thumma at csiro.au
Thu Jan 5 05:33:37 CET 2012


Hi,
I am trying to run cross validation using scripts in synbreed. I get the following error. Could you please help. I have tried with my own data as well as the maize data from the package and I get the same error.

Thank you,
Bala

Error in !gpData$info$codeGeno : invalid argument type

Here is the session info.

R version 2.14.0 (2011-10-31)
Platform: i386-pc-mingw32/i386 (32-bit)

locale:
[1] LC_COLLATE=English_Australia.1252  LC_CTYPE=English_Australia.1252    LC_MONETARY=English_Australia.1252
[4] LC_NUMERIC=C                       LC_TIME=English_Australia.1252

attached base packages:
[1] splines   grid      stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] rrBLUP_2.8       synbreed_0.8-1   kinship_1.1.2    nlme_3.1-102     abind_1.4-0      regress_1.3-5    BLR_1.2          SuppDists_1.1-8
 [9] doBy_4.4.4       snow_0.3-8       lme4_0.999375-42 Matrix_1.0-1     multcomp_1.2-8   mvtnorm_0.9-9991 R2HTML_2.2       survival_2.36-10
[17] qtl_1.22-21      LDheatmap_0.9    MASS_7.3-16      igraph_0.5.5-4   lattice_0.20-0

loaded via a namespace (and not attached):
[1] stats4_2.14.0 tools_2.14.0
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