[Stacomir-commits] r590 - in pkg/stacomir: . inst/examples
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Tue Nov 9 12:31:12 CET 2021
Author: briand
Date: 2021-11-09 12:31:12 +0100 (Tue, 09 Nov 2021)
New Revision: 590
Modified:
pkg/stacomir/DESCRIPTION
pkg/stacomir/inst/examples/report_dc-example.R
pkg/stacomir/inst/examples/report_mig-example.R
pkg/stacomir/inst/examples/report_silver_eel-example.R
pkg/stacomir/inst/examples/report_species-example.R
Log:
Lines too long
Modified: pkg/stacomir/DESCRIPTION
===================================================================
--- pkg/stacomir/DESCRIPTION 2021-11-09 11:07:20 UTC (rev 589)
+++ pkg/stacomir/DESCRIPTION 2021-11-09 11:31:12 UTC (rev 590)
@@ -3,10 +3,14 @@
Date: 2021-11-07
Title: Fish Migration Monitoring
Authors at R: c(person("Cedric", "Briand", role = c("aut", "cre"), email = "cedric.briand00 at gmail.com"),
- person("Marion", "Legrand", role = "aut", email="tableau-salt-loire at logrami.fr"))
+ person("Marion", "Legrand", role = "aut", email="tableau-salt-loire at logrami.fr"),
+ person("Beaulaton", "Laurent", role = "ctb", email = "laurent.beaulaton at ofb.gouv.fr"),
+ person("Boulenger", "Clarisse", role = "ctb", email = "Clarisse.Boulenger at ofb.gouv.fr"),
+ person("Lafage", "Denis", role = "ctb", email = "denis.lafage at logrami.fr"),
+ person("Grall", "Sebastien", role = "ctb", email = "seinormigr.grall at gmail.com"))
Description: Graphical outputs and treatment for a database of fish pass
monitoring. It is a part of the 'STACOMI' open source project developed in
- France by the French Office for Biodiversity (OFB) institute to centralize
+ France by the French Office for Biodiversity institute to centralize
data obtained by fish pass monitoring. This version is available in French and
English. See <http://stacomir.r-forge.r-project.org/> for more information on
'STACOMI'.
@@ -64,7 +68,7 @@
Depends:
R (>= 4.0.0),
methods,
- stacomirtools
+ stacomirtools (>= 0.6.0)
Imports:
magrittr,
intervals,
@@ -93,7 +97,10 @@
rmarkdown
Author: Cedric Briand [aut, cre],
Marion Legrand [aut],
- Timothee Besse [aut]
+ Beaulaton Laurent [ctb],
+ Boulenger Clarisse [ctb],
+ Lafage Denis [ctb],
+ Grall Sebastien [ctb]
Maintainer: Cedric Briand <cedric.briand00 at gmail.com>
RoxygenNote: 7.1.2
NeedsCompilation: no
Modified: pkg/stacomir/inst/examples/report_dc-example.R
===================================================================
--- pkg/stacomir/inst/examples/report_dc-example.R 2021-11-09 11:07:20 UTC (rev 589)
+++ pkg/stacomir/inst/examples/report_dc-example.R 2021-11-09 11:31:12 UTC (rev 590)
@@ -1,5 +1,6 @@
-# this option allows to launch the program without the interface to display some of the program features.
+# this option allows to launch the program without the interface to display
+# some of the program features.
stacomi(database_expected=FALSE)
# An example that will work only if the database is present
# and the program installed and comprises the schema iav
Modified: pkg/stacomir/inst/examples/report_mig-example.R
===================================================================
--- pkg/stacomir/inst/examples/report_mig-example.R 2021-11-09 11:07:20 UTC (rev 589)
+++ pkg/stacomir/inst/examples/report_mig-example.R 2021-11-09 11:31:12 UTC (rev 590)
@@ -1,6 +1,7 @@
stacomi(database_expected=FALSE)
# If you have a working database
-# the following line of code will create the r_mig dataset from the iav (default) schema in the database
+# the following line of code will create the r_mig dataset from the iav (default)
+# schema in the database
\dontrun{
stacomi(database_expected=TRUE)
if (interactive()){
Modified: pkg/stacomir/inst/examples/report_silver_eel-example.R
===================================================================
--- pkg/stacomir/inst/examples/report_silver_eel-example.R 2021-11-09 11:07:20 UTC (rev 589)
+++ pkg/stacomir/inst/examples/report_silver_eel-example.R 2021-11-09 11:31:12 UTC (rev 590)
@@ -3,10 +3,12 @@
# the following script will load data from the two Anguillere monitored in the Somme
# If you have a working database
-# the following line of code will create the r_silver dataset from the "fd80." schema in the database
+# the following line of code will create the r_silver dataset
+# from the "fd80." schema in the database
\dontrun{
stacomi(database_expected=TRUE, sch="fd80.") # overrides the default option sch = 'iav'
- # prompt for user and password, you can set these in the options, including dbname and host
+ # prompt for user and password, you can set these in the options,
+ # including dbname and host
if (interactive()){
if (!exists("user")){
user <- readline(prompt="Enter user: ")
Modified: pkg/stacomir/inst/examples/report_species-example.R
===================================================================
--- pkg/stacomir/inst/examples/report_species-example.R 2021-11-09 11:07:20 UTC (rev 589)
+++ pkg/stacomir/inst/examples/report_species-example.R 2021-11-09 11:31:12 UTC (rev 590)
@@ -1,9 +1,10 @@
# launching stacomi without selecting the scheme or interface
stacomi( database_expected=FALSE)
-# the following script will load data from the two Anguillere monitored in the Somme
-
+# the following script will load data
+# from the two Anguillere monitored in the Somme
# If you have a working database
-# the following line of code will create the bilesp dataset from the "iav." schema in the database
+# the following line of code will create the bilesp dataset from the "iav."
+# schema in the database
\dontrun{
bilesp<-new("report_species")
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