[Soiltexture-commits] r105 - / pkg/soiltexture pkg/soiltexture/R pkg/soiltexture/man pkg/soiltexture/tests pkg/soiltexture/vignettes
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Wed Apr 23 15:50:06 CEST 2014
Author: jmoeys
Date: 2014-04-23 15:50:06 +0200 (Wed, 23 Apr 2014)
New Revision: 105
Modified:
pkg/soiltexture/DESCRIPTION
pkg/soiltexture/NEWS
pkg/soiltexture/R/soiltexture.R
pkg/soiltexture/man/TT.plot.Rd
pkg/soiltexture/man/soiltexture-package.Rd
pkg/soiltexture/tests/TT.plot.R
pkg/soiltexture/vignettes/soiltexture_vignette.Rnw
pkg/soiltexture/vignettes/soiltexture_vignette.bib
soiltexture_2_RCMDcheck_noexamples.bat
soiltexture_3_RCMDINSTALL_build.BAT
soiltexture_compile.R
Log:
added Whitney 191 USDA texture triangle
Modified: pkg/soiltexture/DESCRIPTION
===================================================================
--- pkg/soiltexture/DESCRIPTION 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/DESCRIPTION 2014-04-23 13:50:06 UTC (rev 105)
@@ -1,6 +1,6 @@
Package: soiltexture
-Version: 1.2.13
-Date: 2014-01-10
+Version: 1.2.14
+Date: 2014-04-23
Title: Functions for soil texture plot, classification and transformation
Author: Julien MOEYS <jules_m78-soiltexture at yahoo.fr>, contributions from Wei Shangguan.
Maintainer: Julien MOEYS <jules_m78-soiltexture at yahoo.fr>
Modified: pkg/soiltexture/NEWS
===================================================================
--- pkg/soiltexture/NEWS 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/NEWS 2014-04-23 13:50:06 UTC (rev 105)
@@ -3,6 +3,12 @@
Julien MOEYS
-----------------------------------------------------------------
+VERSION 1.2.14
+
+ 2014/04/23 Added texture triangle from Whitney 1911 (USDA)
+ (courtesy of Nic Jelinski, University of Minnesota,
+ USA)
+
VERSION 1.2.13
2014/01/10 A mistake has been corrected in the texture triangle
Modified: pkg/soiltexture/R/soiltexture.R
===================================================================
--- pkg/soiltexture/R/soiltexture.R 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/R/soiltexture.R 2014-04-23 13:50:06 UTC (rev 105)
@@ -1386,12 +1386,79 @@
unit.tx = quote(bold('%')),
#
text.sum = 100
- ) #
- #
+ ),
+
+ "USDA1911" = list(
+ # USDA 1911 (M. Whitney, 1911)
+ # Courtesy of Nic Jelinski University of Minnesota, USA
+ # 2014-04-23
+
+ "main" = "USDA 1911 (M. Whitney, 1911) - Ternary Plot",
+
+ "tt.points" = read.table( sep = "", header = TRUE,
+ text = "CLAY SILT SAND
+ 0.0 0.0 1.0 # 1
+ 0.2 0.0 0.8 # 2
+ 0.0 0.2 0.8 # 3
+ 0.5 0.0 0.5 # 4
+ 0.3 0.2 0.5 # 5
+ 0.2 0.3 0.5 # 6
+ 0.0 0.5 0.5 # 7
+ 0.2 0.5 0.3 # 8
+ 0.3 0.5 0.2 # 9
+ 0.3 0.7 0.0 # 10
+ 0.2 0.8 0.0 # 11
+ 0.0 1.0 0.0 # 12
+ 1.0 0.0 0.0" ), # 13
+
+ "tt.polygons" = list(
+ "C" = list(
+ "name" = "Clay",
+ "points" = c( 4, 13, 10, 5 )
+ ),
+ "SaC" = list( # INSTEAD OF SC (can be mistaken for Silty Clay)
+ "name" = "Sandy Clay",
+ "points" = c( 2, 4, 5 )
+ ),
+ "CL" = list(
+ "name" = "Clay Loam",
+ "points" = c( 5, 9, 8, 6 )
+ ),
+ "SaCL" = list( # INSTEAD OF SiCL
+ "name" = "Sandy Clay Loam",
+ "points" = c( 8, 9, 10, 11 )
+ ),
+ "L" = list(
+ "name" = "Loam",
+ "points" = c( 7, 6, 8 )
+ ),
+ "SiL" = list(
+ "name" = "Silt Loam",
+ "points" = c( 7, 8, 11, 12 )
+ ),
+ "SaL" = list( # INSTEAD OF SL (can be mistaken for Silty Loam)
+ "name" = "Sandy Loam",
+ "points" = c( 3, 2, 5, 7 )
+ ),
+ "Sa" = list( # INSTEAD OF S (Can be mistaken for Silt)
+ "name" = "Sand",
+ "points" = c( 1, 2, 3 )
+ )
+ ),
+ "blr.clock" = c( FALSE, TRUE, NA ),
+ "tlr.an" = c( 45, 90, 45 ),
+ "blr.tx" = c( "SILT", "CLAY", "SAND" ),
+ "base.css.ps.lim" = c( 0, 5, 50, 2000 ),
+ "tri.css.ps.lim" = c( 0, 5, 50, 2000 ),
+ "unit.ps" = quote( bold( mu ) * bold( "m" ) ),
+ "unit.tx" = quote( bold( "%" ) ),
+ "text.sum" = 100
+ )
+
# +-------------------------------------------------------------------------+
# | END(SCRIPT PARAMETERS SPECIFICATION) |
# +-------------------------------------------------------------------------+
- #
+
) #
) #
Modified: pkg/soiltexture/man/TT.plot.Rd
===================================================================
--- pkg/soiltexture/man/TT.plot.Rd 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/man/TT.plot.Rd 2014-04-23 13:50:06 UTC (rev 105)
@@ -870,6 +870,8 @@
TT.plot( class.sys = "DE.TGL85.TT" ) # German TGL 1985
+TT.plot( class.sys = "USDA1911" ) # USDA 1911 (M. Whitney, 1911)
+
Modified: pkg/soiltexture/man/soiltexture-package.Rd
===================================================================
--- pkg/soiltexture/man/soiltexture-package.Rd 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/man/soiltexture-package.Rd 2014-04-23 13:50:06 UTC (rev 105)
@@ -34,9 +34,9 @@
\tabular{ll}{Package: \tab soiltexture\cr
-Version: \tab 1.2.13\cr
+Version: \tab 1.2.14\cr
-Date: \tab 2014-01-10\cr
+Date: \tab 2014-04-23\cr
Title: \tab Functions for soil texture plot, classification and transformation\cr
Modified: pkg/soiltexture/tests/TT.plot.R
===================================================================
--- pkg/soiltexture/tests/TT.plot.R 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/tests/TT.plot.R 2014-04-23 13:50:06 UTC (rev 105)
@@ -70,6 +70,7 @@
try( TT.plot( class.sys = "PL.TT" ) ) # Polish
TT.plot( class.sys = "DE.SEA74.TT" ) # German SEA 1974
TT.plot( class.sys = "DE.TGL85.TT" ) # German TGL 1985
+TT.plot( class.sys = "USDA1911" ) # USDA 1911 (M. Whitney, 1911)
# ::: Test all the languages:
Modified: pkg/soiltexture/vignettes/soiltexture_vignette.Rnw
===================================================================
--- pkg/soiltexture/vignettes/soiltexture_vignette.Rnw 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/vignettes/soiltexture_vignette.Rnw 2014-04-23 13:50:06 UTC (rev 105)
@@ -835,6 +835,46 @@
% +~~~~~~~~~~~~~~~~~~~~~~~~~~~~+
+\subsection{Whitney 1911 USDA soil texture classification}
+
+To display a Whitney (1911) version of the USDA texture triangle,
+type:
+
+
+<<echo=TRUE,fig=TRUE,include=TRUE>>=
+TT.plot( class.sys = "USDA1911" )
+@
+
+
+The Whitney USDA 1911 soil texture triangle has been built
+considering a silt - sand limit of
+\Sexpr{TT.get("USDA1911")[["base.css.ps.lim"]][3]}$\mu$meters,
+and a \textbf{clay - silt limit of
+\Sexpr{TT.get("USDA1911")[["base.css.ps.lim"]][2]}$\mu$meters
+(Notice the difference with the actual USDA triangle)}\\
+
+See the table for soil texture classes symbols.\\
+
+
+<<echo=FALSE,results=tex>>=
+tex.tbl <- TT.classes.tbl( class.sys = "USDA1911" )
+xtable(
+ x = tex.tbl[, -3 ], #
+ caption = "Texture classes of the Whitney 1911 system / triangle",
+ label = NULL
+) #
+@
+
+
+This triangle has been kindly digitised and provided by Nic
+Jelinski (University of Minnesota, USA). The original reference
+used to digitise this triangle is the Whitney 1911\cite{WHITNEY1911}.
+
+\clearpage % otherwise the table may 'eats' next triangle
+
+
+
+% +~~~~~~~~~~~~~~~~~~~~~~~~~~~~+
\subsection{The European Soil Map (HYPRES) soil texture classification}
\textbf{NOTE: I had previously erroneously named that system
Modified: pkg/soiltexture/vignettes/soiltexture_vignette.bib
===================================================================
--- pkg/soiltexture/vignettes/soiltexture_vignette.bib 2014-04-17 14:31:03 UTC (rev 104)
+++ pkg/soiltexture/vignettes/soiltexture_vignette.bib 2014-04-23 13:50:06 UTC (rev 105)
@@ -1,4 +1,4 @@
-% This file was created with JabRef 2.5.
+% This file was created with JabRef 2.9.2.
% Encoding: Cp1252
@MISC{CANSIS2010,
@@ -23,6 +23,18 @@
url = {http://nibis.ni.schule.de/\~{}trianet/soil/boden5.htm}
}
+ at MISC{BOSSUYT2009,
+ author = {Bart {Van Bossuyt}},
+ title = {De Belgische Textuurdriehoek},
+ howpublished = {website},
+ month = {last checked 2009/10/14},
+ year = {2009},
+ note = {\texttt{http://www.begeleidzelfstandigleren.com/aardrijkskunde/losse\_animaties/textuurdriehoek\_bodems.html}},
+ owner = {root},
+ timestamp = {2009.10.14},
+ url = {http://www.begeleidzelfstandigleren.com/aardrijkskunde/losse\_animaties/textuurdriehoek\_bodems.html}
+}
+
@MISC{CANSIS2009,
author = {Anonymous},
title = {The Canadian Soil Information System (CanSIS) -- National Soil DataBase
@@ -36,58 +48,6 @@
url = {http://sis.agr.gc.ca/cansis/nsdb/lpdb/faotext.html}
}
- at MISC{WIKIPEDIADE2009,
- author = {Anonymous},
- title = {Fingerprobe (Boden)},
- howpublished = {Website (Wikipedia.de)},
- year = {2009},
- note = {Last access 2009/08/24.\texttt{http://de.wikipedia.org/wiki/Fingerprobe\_\%28Boden\%29}},
- owner = {root},
- timestamp = {2009.08.24},
- url = {http://de.wikipedia.org/wiki/Fingerprobe\_\%28Boden\%29}
-}
-
- at BOOK{BAIZE1995,
- title = {Guide pour la description des sols},
- publisher = {INRA},
- year = {1995},
- author = {D. Baize and B. Jabiol},
- series = {col. Techniques et pratiques.},
- note = {375 p.},
- owner = {root},
- timestamp = {2009.08.24}
-}
-
- at ARTICLE{BORMANN2007,
- author = {H. Bormann},
- title = {Analysis of the suitability of the German soil texture classification
- for the regional scale application of physical based hydrological
- model},
- journal = {Advances in Geosciences},
- year = {2007},
- volume = {11},
- pages = {7--13},
- note = {\texttt{www.adv-geosci.net/11/7/2007/}},
- owner = {root},
- timestamp = {2009.08.22},
- url = {www.adv-geosci.net/11/7/2007/}
-}
-
- at ARTICLE{TEH1996,
- author = {T.B.S. Christopher and A.M. Mokhtaruddin},
- title = {A computer program to determine the soil textural class in 1-2-3
- for windows and excel},
- journal = {Communications in Soil Science and Plant Analysis},
- year = {1996},
- volume = {27},
- pages = {2315--2319},
- number = {9 and 10},
- note = {\texttt{http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a905339412\~{}tab=linking}},
- owner = {julienm},
- timestamp = {2009.08.19},
- url = {http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a905339412\~{}tab=linking}
-}
-
@MISC{DEFOURNY2009,
author = {Defourny and Delvaux and Ducarme and Radoux},
title = {Travaux pratiques de cartographie du sol},
@@ -100,18 +60,6 @@
url = {http://www.icampus.ucl.ac.be/courses/MILA2230/document/texture.html}
}
- at TECHREPORT{DEFRA2006,
- author = {{Defra -- Rural Development Service -- Technical Advice Unit}},
- title = {Technical Advice Note 52 \& 53 -- Soil texture},
- institution = {Rural Development Service},
- year = {2006},
- month = {august},
- note = {6 p. \texttt{http://www.defra.gov.uk/environment/land/soil/information/publications.htm}},
- owner = {root},
- timestamp = {2009.08.22},
- url = {http://www.defra.gov.uk/environment/land/soil/information/publications.htm}
-}
-
@MISC{DUCARME2009,
author = {F. Ducarme and P. Defourny and Delvaux B. and Radoux J.},
title = {La texture du sol -- Triangle textural belge},
@@ -123,6 +71,17 @@
url = {http://www.icampus.ucl.ac.be/courses/MILA2230/document/texture.html}
}
+ at MISC{GEOVLEX2009,
+ author = {{GEOVLEX, MLU Halle-Wittenberg}},
+ title = {Glossardatenbank -- Bodenart},
+ howpublished = {Website},
+ year = {2009},
+ note = {Last access 2009/08/24. \texttt{http://mars.geographie.uni-halle.de/mlucampus/geoglossar/terme\_datenblatt.php?terme=Bodenart}},
+ owner = {root},
+ timestamp = {2009.08.24},
+ url = {http://mars.geographie.uni-halle.de/mlucampus/geoglossar/terme\_datenblatt.php?terme=Bodenart}
+}
+
@MISC{HYPRES2009,
author = {{European Soil Bureau working group "HYdraulic PRoperties of European
Soils" (HYPRES)}},
@@ -136,38 +95,59 @@
url = {http://www.macaulay.ac.uk/hypres/hypressoil.html}
}
- at MANUAL{CHEMOMETRICSREF,
- title = {chemometrics: Multivariate Statistical Analysis in Chemometrics},
- author = {P. Filzmoser and K. Varmuza},
- year = {2008},
- note = {R package version 0.4. \texttt{http://cran.r-project.org/web/packages/chemometrics/index.html}},
- url = {http://cran.r-project.org/web/packages/chemometrics/index.html}
+ at MASTERSTHESIS{LIDBERG2009,
+ author = {Linnéa Lidberg},
+ title = {Texturbestämning genom fält-, pipett- och hydrometermetoder},
+ school = {SLU -- Institutionen för skoglig marklära (Department of Forest Soils)},
+ year = {2009},
+ type = {Examensarbete (MSc Soil Science and Environmental Studies)},
+ address = {Uppsala, Sweden},
+ note = {vol 20. 31 pp. \texttt{http://ex-epsilon.slu.se/archive/00003079/}},
+ owner = {root},
+ timestamp = {2009.09.05},
+ url = {http://ex-epsilon.slu.se/archive/00003079/}
}
- at MISC{GEOVLEX2009,
- author = {{GEOVLEX, MLU Halle-Wittenberg}},
- title = {Glossardatenbank -- Bodenart},
+ at MANUAL{RDCT2009,
+ title = {R: A Language and Environment for Statistical Computing},
+ author = {{R Development Core Team}},
+ organization = {R Foundation for Statistical Computing},
+ address = {Vienna, Austria},
+ year = {2009},
+ note = {{ISBN} 3-900051-07-0. \texttt{http://www.R-project.org}},
+ url = {http://www.R-project.org}
+}
+
+ at MISC{SOLBRETAGNE2009,
+ author = {{Sols de Bretagne}},
+ title = {Photothèque -- Etude d'un sol -- Triangle des textures GEPPA},
howpublished = {Website},
year = {2009},
- note = {Last access 2009/08/24. \texttt{http://mars.geographie.uni-halle.de/mlucampus/geoglossar/terme\_datenblatt.php?terme=Bodenart}},
+ note = {Last access 2009/08/24. \texttt{http://www.sols-de-bretagne.fr/index.php/component/option,com\_datsogallery/Itemid,79/func,detail/catid,2/id,66/}},
owner = {root},
timestamp = {2009.08.24},
- url = {http://mars.geographie.uni-halle.de/mlucampus/geoglossar/terme\_datenblatt.php?terme=Bodenart}
+ url = {http://www.sols-de-bretagne.fr/index.php/component/option,com\_datsogallery/Itemid,79/func,detail/catid,2/id,66/}
}
- at ARTICLE{GERAKIS1999SSSAJ,
- author = {A. Gerakis and B. Baer},
- title = {A Computer Program for Soil Textural Classification},
- journal = {Soil Science Society of America Journal},
- year = {1999},
- volume = {63},
- pages = {807--808},
- note = {\texttt{http://nowlin.css.msu.edu/software/triangle\_form.html}},
+ at MISC{WIKIPEDIADE2009,
+ author = {Anonymous},
+ title = {Fingerprobe (Boden)},
+ howpublished = {Website (Wikipedia.de)},
+ year = {2009},
+ note = {Last access 2009/08/24.\texttt{http://de.wikipedia.org/wiki/Fingerprobe\_\%28Boden\%29}},
owner = {root},
- timestamp = {2009.08.18},
- url = {http://soil.scijournals.org/cgi/content/abstract/63/4/807}
+ timestamp = {2009.08.24},
+ url = {http://de.wikipedia.org/wiki/Fingerprobe\_\%28Boden\%29}
}
+ at MANUAL{CHEMOMETRICSREF,
+ title = {chemometrics: Multivariate Statistical Analysis in Chemometrics},
+ author = {P. Filzmoser and K. Varmuza},
+ year = {2008},
+ note = {R package version 0.4. \texttt{http://cran.r-project.org/web/packages/chemometrics/index.html}},
+ url = {http://cran.r-project.org/web/packages/chemometrics/index.html}
+}
+
@TECHREPORT{HOLBECHE2008,
author = {Georgina Holbeche},
title = {Soilquality.org.au -- Physics -- Measuring soil texture in the laboratory},
@@ -182,17 +162,45 @@
url = {http://www.soilquality.org.au/documents/28/original/Phys\_-\_Measuring\_Soil\_Texture\_in\_the\_Lab\_web.pdf}
}
- at ARTICLE{JAMAGNE1967,
- author = {M. Jamagne},
- title = {Bases et techniques d'une cartographie des sols},
- journal = {Annales Agronomiques},
- year = {1967},
- volume = {18 (hors série)},
- pages = {142},
+ at ARTICLE{RICHER2008EGS,
+ author = {A. {Richer de Forges} and C. Feller and M. Jamagne and D. Arrouays},
+ title = {Perdus dans le triangle des textures},
+ journal = {Etudes et Gestion des Sols},
+ year = {2008},
+ volume = {15},
+ pages = {97--111},
+ number = {2},
+ note = {(en: Lost in the textures triangle)},
owner = {root},
- timestamp = {2009.08.24}
+ timestamp = {2009.08.18}
}
+ at MISC{RICHER2008INRA,
+ author = {A. {Richer de Forges} and C. Feller and M. Jamagne and D. Arrouays},
+ title = {Lost in the triangular diagrams of soil texture},
+ howpublished = {Poster},
+ year = {2008},
+ note = {\texttt{http://www.prodinra.inra.fr/prodinra/pinra/data/2008/08/PROD2008387413ba\_20080819120904968.pdf}},
+ owner = {root},
+ timestamp = {2009.08.18},
+ url = {http://www.prodinra.inra.fr/prodinra/pinra/data/2008/08/PROD2008387413ba\_20080819120904968.pdf}
+}
+
+ at ARTICLE{BORMANN2007,
+ author = {H. Bormann},
+ title = {Analysis of the suitability of the German soil texture classification
+ for the regional scale application of physical based hydrological
+ model},
+ journal = {Advances in Geosciences},
+ year = {2007},
+ volume = {11},
+ pages = {7--13},
+ note = {\texttt{www.adv-geosci.net/11/7/2007/}},
+ owner = {root},
+ timestamp = {2009.08.22},
+ url = {www.adv-geosci.net/11/7/2007/}
+}
+
@ARTICLE{LARK2007,
author = {R. M. Lark and T. F. A. Bishop},
title = {Cokriging particle size fractions of the soil},
@@ -207,6 +215,60 @@
url = {http://www3.interscience.wiley.com/journal/118000728/abstract}
}
+ at PHDTHESIS{MOEYS2007,
+ author = {Julien Moeys},
+ title = {Variabilité spatiale et déterminismes agro–pédologiques du devenir
+ d’un herbicide dans l’horizon de surface -- Application au cas de
+ l'isoproturon dans un secteur agricole de Beauce chartraine},
+ school = {AgroParisTech},
+ year = {2007},
+ type = {Soil Science},
+ address = {Paris, France},
+ month = {December},
+ note = {273 pp. + annexes. \texttt{http://pastel.paristech.org/4448/}},
+ owner = {julienm},
+ timestamp = {2009.09.01},
+ url = {http://pastel.paristech.org/4448/}
+}
+
+ at TECHREPORT{DEFRA2006,
+ author = {{Defra -- Rural Development Service -- Technical Advice Unit}},
+ title = {Technical Advice Note 52 \& 53 -- Soil texture},
+ institution = {Rural Development Service},
+ year = {2006},
+ month = {august},
+ note = {6 p. \texttt{http://www.defra.gov.uk/environment/land/soil/information/publications.htm}},
+ owner = {root},
+ timestamp = {2009.08.22},
+ url = {http://www.defra.gov.uk/environment/land/soil/information/publications.htm}
+}
+
+ at ARTICLE{TEH2003CPSA,
+ author = {C.B.S. Teh and M.A. Rashid},
+ title = {Object-Oriented Code to Lookup Soil Texture Classes for Any Soil
+ Classification Scheme},
+ journal = {Communications in Soil Science and Plant Analysis},
+ year = {2003},
+ volume = {34},
+ pages = {1--11},
+ number = {1},
+ note = {\texttt{http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a713624019\~{}tab=linking}},
+ owner = {root},
+ timestamp = {2009.08.18},
+ url = {http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a713624019\~{}tab=linking}
+}
+
+ at BOOK{MASSREF,
+ title = {Modern Applied Statistics with S},
+ publisher = {Springer},
+ year = {2002},
+ author = {W. N. Venables and B. D. Ripley},
+ address = {New York},
+ edition = {Fourth},
+ note = {ISBN 0-387-95457-0. \texttt{http://www.stats.ox.ac.uk/pub/MASS4}},
+ url = {http://www.stats.ox.ac.uk/pub/MASS4}
+}
+
@INPROCEEDINGS{SWEAVE2002,
author = {F. Leisch},
title = {Sweave: Dynamic Generation of Statistical Reports Using Literate
@@ -220,19 +282,6 @@
url = {http://www.stat.uni-muenchen.de/\~{}leisch/Sweave}
}
- at MASTERSTHESIS{LIDBERG2009,
- author = {Linnéa Lidberg},
- title = {Texturbestämning genom fält-, pipett- och hydrometermetoder},
- school = {SLU -- Institutionen för skoglig marklära (Department of Forest Soils)},
- year = {2009},
- type = {Examensarbete (MSc Soil Science and Environmental Studies)},
- address = {Uppsala, Sweden},
- note = {vol 20. 31 pp. \texttt{http://ex-epsilon.slu.se/archive/00003079/}},
- owner = {root},
- timestamp = {2009.09.05},
- url = {http://ex-epsilon.slu.se/archive/00003079/}
-}
-
@ARTICLE{LIEBENS2001CPSA,
author = {J. Liebens},
title = {Spreadsheet macro to determine usda soil textural subclasses},
@@ -261,20 +310,17 @@
url = {http://www.publish.csiro.au/nid/84/paper/SR00065.htm}
}
- at PHDTHESIS{MOEYS2007,
- author = {Julien Moeys},
- title = {Variabilité spatiale et déterminismes agro–pédologiques du devenir
- d’un herbicide dans l’horizon de surface -- Application au cas de
- l'isoproturon dans un secteur agricole de Beauce chartraine},
- school = {AgroParisTech},
- year = {2007},
- type = {Soil Science},
- address = {Paris, France},
- month = {December},
- note = {273 pp. + annexes. \texttt{http://pastel.paristech.org/4448/}},
- owner = {julienm},
- timestamp = {2009.09.01},
- url = {http://pastel.paristech.org/4448/}
+ at ARTICLE{GERAKIS1999SSSAJ,
+ author = {A. Gerakis and B. Baer},
+ title = {A Computer Program for Soil Textural Classification},
+ journal = {Soil Science Society of America Journal},
+ year = {1999},
+ volume = {63},
+ pages = {807--808},
+ note = {\texttt{http://nowlin.css.msu.edu/software/triangle\_form.html}},
+ owner = {root},
+ timestamp = {2009.08.18},
+ url = {http://soil.scijournals.org/cgi/content/abstract/63/4/807}
}
@ARTICLE{NEMES1999GEOD,
@@ -291,40 +337,32 @@
url = {http://dx.doi.org/10.1016/S0016-7061(99)00014-2}
}
- at MANUAL{RDCT2009,
- title = {R: A Language and Environment for Statistical Computing},
- author = {{R Development Core Team}},
- organization = {R Foundation for Statistical Computing},
- address = {Vienna, Austria},
- year = {2009},
- note = {{ISBN} 3-900051-07-0. \texttt{http://www.R-project.org}},
- url = {http://www.R-project.org}
+ at ARTICLE{TEH1996,
+ author = {T.B.S. Christopher and A.M. Mokhtaruddin},
+ title = {A computer program to determine the soil textural class in 1-2-3
+ for windows and excel},
+ journal = {Communications in Soil Science and Plant Analysis},
+ year = {1996},
+ volume = {27},
+ pages = {2315--2319},
+ number = {9 and 10},
+ note = {\texttt{http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a905339412\~{}tab=linking}},
+ owner = {julienm},
+ timestamp = {2009.08.19},
+ url = {http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a905339412\~{}tab=linking}
}
- at ARTICLE{RICHER2008EGS,
- author = {A. {Richer de Forges} and C. Feller and M. Jamagne and D. Arrouays},
- title = {Perdus dans le triangle des textures},
- journal = {Etudes et Gestion des Sols},
- year = {2008},
- volume = {15},
- pages = {97--111},
- number = {2},
- note = {(en: Lost in the textures triangle)},
+ at BOOK{BAIZE1995,
+ title = {Guide pour la description des sols},
+ publisher = {INRA},
+ year = {1995},
+ author = {D. Baize and B. Jabiol},
+ series = {col. Techniques et pratiques.},
+ note = {375 p.},
owner = {root},
- timestamp = {2009.08.18}
+ timestamp = {2009.08.24}
}
- at MISC{RICHER2008INRA,
- author = {A. {Richer de Forges} and C. Feller and M. Jamagne and D. Arrouays},
- title = {Lost in the triangular diagrams of soil texture},
- howpublished = {Poster},
- year = {2008},
- note = {\texttt{http://www.prodinra.inra.fr/prodinra/pinra/data/2008/08/PROD2008387413ba\_20080819120904968.pdf}},
- owner = {root},
- timestamp = {2009.08.18},
- url = {http://www.prodinra.inra.fr/prodinra/pinra/data/2008/08/PROD2008387413ba\_20080819120904968.pdf}
-}
-
@INBOOK{USDA1993,
chapter = {3},
title = {Soil survey manual},
@@ -338,55 +376,15 @@
url = {http://soils.usda.gov/technical/manual/print\_version/chapter3.html}
}
- at MISC{SOLBRETAGNE2009,
- author = {{Sols de Bretagne}},
- title = {Photothèque -- Etude d'un sol -- Triangle des textures GEPPA},
- howpublished = {Website},
- year = {2009},
- note = {Last access 2009/08/24. \texttt{http://www.sols-de-bretagne.fr/index.php/component/option,com\_datsogallery/Itemid,79/func,detail/catid,2/id,66/}},
- owner = {root},
- timestamp = {2009.08.24},
- url = {http://www.sols-de-bretagne.fr/index.php/component/option,com\_datsogallery/Itemid,79/func,detail/catid,2/id,66/}
+ at TECHREPORT{TGL1985,
+ author = {{TGL 24300-05\_1985-06}},
+ title = {Aufnahme landwirtschaftlich genutzter Standorte - K\"{o}rnungsarten
+ und Skelettgehalt},
+ institution = {Bauhaus-Universit\"{a}t, Weimar},
+ year = {1985},
+ timestamp = {2011.11.15}
}
- at ARTICLE{TEH2003CPSA,
- author = {C.B.S. Teh and M.A. Rashid},
- title = {Object-Oriented Code to Lookup Soil Texture Classes for Any Soil
- Classification Scheme},
- journal = {Communications in Soil Science and Plant Analysis},
- year = {2003},
- volume = {34},
- pages = {1--11},
- number = {1},
- note = {\texttt{http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a713624019\~{}tab=linking}},
- owner = {root},
- timestamp = {2009.08.18},
- url = {http://www.informaworld.com/smpp/content\~{}db=all\~{}content=a713624019\~{}tab=linking}
-}
-
- at MISC{BOSSUYT2009,
- author = {Bart {Van Bossuyt}},
- title = {De Belgische Textuurdriehoek},
- howpublished = {website},
- month = {last checked 2009/10/14},
- year = {2009},
- note = {\texttt{http://www.begeleidzelfstandigleren.com/aardrijkskunde/losse\_animaties/textuurdriehoek\_bodems.html}},
- owner = {root},
- timestamp = {2009.10.14},
- url = {http://www.begeleidzelfstandigleren.com/aardrijkskunde/losse\_animaties/textuurdriehoek\_bodems.html}
-}
-
- at BOOK{MASSREF,
- title = {Modern Applied Statistics with S},
- publisher = {Springer},
- year = {2002},
- author = {W. N. Venables and B. D. Ripley},
- address = {New York},
- edition = {Fourth},
- note = {ISBN 0-387-95457-0. \texttt{http://www.stats.ox.ac.uk/pub/MASS4}},
- url = {http://www.stats.ox.ac.uk/pub/MASS4}
-}
-
@ARTICLE{VERHEYE1984PEDO,
author = {W. Verheye and J. Ameryckx},
title = {Mineral fractions and classificaton of soil texture.},
@@ -403,19 +401,28 @@
title = {Standortserkundungsanweisung SEA74 - A/B},
institution = {VEB FORSTPROJEKTIERUNG POTSDAM},
year = {1974},
- month = {},
- note = {},
- timestamp = {2011.11.15}
+ timestamp = {2011.11.15}
}
- at TECHREPORT{TGL1985,
- author = {{TGL 24300-05\_1985-06}},
- title = {Aufnahme landwirtschaftlich genutzter Standorte - K\"{o}rnungsarten und Skelettgehalt},
- institution = {Bauhaus-Universit\"{a}t, Weimar},
- year = {1985},
- month = {},
- note = {},
- timestamp = {2011.11.15}
+ at ARTICLE{JAMAGNE1967,
+ author = {M. Jamagne},
+ title = {Bases et techniques d'une cartographie des sols},
+ journal = {Annales Agronomiques},
+ year = {1967},
+ volume = {18 (hors série)},
+ pages = {142},
+ owner = {root},
+ timestamp = {2009.08.24}
}
+ at ARTICLE{WHITNEY1911,
+ author = {M. Whitney},
+ title = {The use of soils east of the Great Plains region},
+ journal = {United States Department of Agriculture Bureau Soils Bulletin},
+ year = {1911},
+ volume = {78},
+ institution = {United States Department of Agriculture Bureau},
+ owner = {julienm},
+ timestamp = {2014.04.23}
+}
Modified: soiltexture_2_RCMDcheck_noexamples.bat
===================================================================
--- soiltexture_2_RCMDcheck_noexamples.bat 2014-04-17 14:31:03 UTC (rev 104)
+++ soiltexture_2_RCMDcheck_noexamples.bat 2014-04-23 13:50:06 UTC (rev 105)
@@ -2,7 +2,7 @@
cd /D "%rPackagesDir%\%pkgname%\pkg"
-R CMD check --no-examples --as-cran %pkgname%_1.2.13.tar.gz
+R CMD check --no-examples --as-cran %pkgname%_1.2.14.tar.gz
@REM --as-cran
Modified: soiltexture_3_RCMDINSTALL_build.BAT
===================================================================
--- soiltexture_3_RCMDINSTALL_build.BAT 2014-04-17 14:31:03 UTC (rev 104)
+++ soiltexture_3_RCMDINSTALL_build.BAT 2014-04-23 13:50:06 UTC (rev 105)
@@ -2,6 +2,6 @@
cd /D "%rPackagesDir%\%pkgname%\pkg"
-R CMD INSTALL --build --compile-both --compact-docs --byte-compile %pkgname%_1.2.13.tar.gz
+R CMD INSTALL --build --compile-both --compact-docs --byte-compile %pkgname%_1.2.14.tar.gz
pause
Modified: soiltexture_compile.R
===================================================================
--- soiltexture_compile.R 2014-04-17 14:31:03 UTC (rev 104)
+++ soiltexture_compile.R 2014-04-23 13:50:06 UTC (rev 105)
@@ -18,8 +18,8 @@
pkgDescription(
pkgName = pkgName,
pkgDir = pkgDir,
- pkgVersion = "1.2.13",
- pkgDepends = c("sp","MASS"),
+ pkgVersion = "1.2.14",
+ pkgDepends = c( "sp","MASS" ),
pkgSuggests = "xtable", # c("drc","plotrix"),
RVersion = NULL
)
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