[Sleuth2-commits] r82 - in pkg/Sleuth3: . inst/doc man vignettes
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Wed Jan 24 07:27:37 CET 2024
Author: berwin
Date: 2024-01-24 07:27:37 +0100 (Wed, 24 Jan 2024)
New Revision: 82
Modified:
pkg/Sleuth3/DESCRIPTION
pkg/Sleuth3/inst/doc/Sleuth3-manual.pdf
pkg/Sleuth3/man/case1102.Rd
pkg/Sleuth3/man/case1502.Rd
pkg/Sleuth3/man/ex0222.Rd
pkg/Sleuth3/man/ex0223.Rd
pkg/Sleuth3/man/ex0330.Rd
pkg/Sleuth3/man/ex0331.Rd
pkg/Sleuth3/man/ex0332.Rd
pkg/Sleuth3/man/ex0524.Rd
pkg/Sleuth3/man/ex0525.Rd
pkg/Sleuth3/man/ex0729.Rd
pkg/Sleuth3/man/ex0730.Rd
pkg/Sleuth3/man/ex0820.Rd
pkg/Sleuth3/man/ex0828.Rd
pkg/Sleuth3/man/ex0921.Rd
pkg/Sleuth3/man/ex0923.Rd
pkg/Sleuth3/man/ex1028.Rd
pkg/Sleuth3/man/ex1029.Rd
pkg/Sleuth3/man/ex1030.Rd
pkg/Sleuth3/man/ex1033.Rd
pkg/Sleuth3/man/ex1223.Rd
pkg/Sleuth3/man/ex1225.Rd
pkg/Sleuth3/man/ex1507.Rd
pkg/Sleuth3/man/ex1518.Rd
pkg/Sleuth3/man/ex2226.Rd
pkg/Sleuth3/vignettes/chapter01-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter02-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter03-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter04-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter05-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter06-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter07-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter08-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter09-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter10-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter11-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter12-HortonMosaic.Rnw
pkg/Sleuth3/vignettes/chapter13-HortonMosaic.Rnw
Log:
Sleuth3:
Changed DESCRIPTION to make package depend on R >= 4.1.0 (on R 4.0.x the package does not pass 'R CMD check' as here was no package locfit for those versions of R).
Changed all \VignetteEngine{} occurrences from \VignetteEngine{knitr} to \VignetteEngine{knitr::knitr} to reduce number of NOTEs in CRAN checking.
Modified some *.Rd files as per NOTEs created by 'R CMD check'.
Updated inst/doc/Sleuth2-manual.pdf.
Bumped version number.
Modified: pkg/Sleuth3/DESCRIPTION
===================================================================
--- pkg/Sleuth3/DESCRIPTION 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/DESCRIPTION 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,7 +1,7 @@
Package: Sleuth3
Title: Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)"
-Version: 1.0-3
-Date: 2019-01-24
+Version: 1.0-4
+Date: 2024-01-24
Author: Original by F.L. Ramsey and D.W. Schafer;
modifications by Daniel W. Schafer, Jeannie Sifneos and Berwin
A. Turlach; vignettes contributed by Nicholas Horton, Linda Loi,
@@ -11,8 +11,8 @@
ed)", Cengage Learning.
Maintainer: Berwin A Turlach <Berwin.Turlach at gmail.com>
LazyData: yes
-Depends: R (>= 3.5.0)
+Depends: R (>= 4.1.0)
Suggests: CCA, Hmisc, MASS, agricolae, car, gmodels, knitr, lattice, leaps, mosaic, multcomp
VignetteBuilder: knitr
License: GPL (>= 2)
-URL: http://r-forge.r-project.org/projects/sleuth2/
+URL: https://r-forge.r-project.org/projects/sleuth2/
Modified: pkg/Sleuth3/inst/doc/Sleuth3-manual.pdf
===================================================================
(Binary files differ)
Modified: pkg/Sleuth3/man/case1102.Rd
===================================================================
--- pkg/Sleuth3/man/case1102.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/case1102.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -6,7 +6,7 @@
The human brain is protected from bacteria and toxins, which course
through the blood--stream, by a single layer of cells called the
blood--brain barrier. These data come from an experiment (on rats,
- which process a similar barrier) to study a method of disrupting the
+ which possess a similar barrier) to study a method of disrupting the
barrier by infusing a solution of concentrated sugars.
}
\usage{case1102}
Modified: pkg/Sleuth3/man/case1502.Rd
===================================================================
--- pkg/Sleuth3/man/case1502.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/case1502.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -25,7 +25,7 @@
\references{
Jones, P.D., D. E. Parker, T. J. Osborn, and K. R. Briffa, (2011) Global
and Hemispheric Temperature Anomalies and and Marine Instrumental Records,
- CDIAC, \url{http://cdiac.ornl.gov/trends/temp/jonescru/jones.html}, August 4, 2011.
+ CDIAC, http://cdiac.ornl.gov/trends/temp/jonescru/jones.html, August 4, 2011.
}
\seealso{
\code{\link{ex1519}}
Modified: pkg/Sleuth3/man/ex0222.Rd
===================================================================
--- pkg/Sleuth3/man/ex0222.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0222.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -26,7 +26,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0330}}, \code{\link{ex0331}}, \code{\link{ex0524}},
Modified: pkg/Sleuth3/man/ex0223.Rd
===================================================================
--- pkg/Sleuth3/man/ex0223.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0223.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -33,7 +33,7 @@
Report to Congress: The Effect of Increased Speed Limits in the
Post-NMSL Era, National Highway Traffic Safety Administration,
February, 1998; available in the reports library at
- \url{http://www-fars.nhtsa.dot.gov/}.
+ \url{https://www-fars.nhtsa.dot.gov/}.
}
\examples{
str(ex0223)
Modified: pkg/Sleuth3/man/ex0330.Rd
===================================================================
--- pkg/Sleuth3/man/ex0330.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0330.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -22,7 +22,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0331}}, \code{\link{ex0524}},
Modified: pkg/Sleuth3/man/ex0331.Rd
===================================================================
--- pkg/Sleuth3/man/ex0331.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0331.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -22,7 +22,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0330}}, \code{\link{ex0524}},
Modified: pkg/Sleuth3/man/ex0332.Rd
===================================================================
--- pkg/Sleuth3/man/ex0332.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0332.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -21,7 +21,7 @@
Course in Methods of Data Analysis (3rd ed)}, Cengage Learning.
}
\references{
- College Board: \url{http://www.collegeboard.com/student/} (11 July 2011)
+ College Board: http://www.collegeboard.com/student/ (11 July 2011)
}
\examples{
str(ex0332)
Modified: pkg/Sleuth3/man/ex0524.Rd
===================================================================
--- pkg/Sleuth3/man/ex0524.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0524.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -28,7 +28,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0330}}, \code{\link{ex0331}},
Modified: pkg/Sleuth3/man/ex0525.Rd
===================================================================
--- pkg/Sleuth3/man/ex0525.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0525.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -29,7 +29,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0330}}, \code{\link{ex0331}},
Modified: pkg/Sleuth3/man/ex0729.Rd
===================================================================
--- pkg/Sleuth3/man/ex0729.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0729.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -31,7 +31,7 @@
Evaluation of Edison/Mitofsky Election System 2004 prepared by Edison Media
Research and Mitofsky International for the National Election Pool (NEP),
January 15, 2005.
- \url{http://abcnews.go.com/images/Politics/EvaluationofEdisonMitofskyElectionSystem.pdf}
+ \url{https://abcnews.go.com/images/Politics/EvaluationofEdisonMitofskyElectionSystem.pdf}
}
\seealso{
\code{\link{ex0730}}
Modified: pkg/Sleuth3/man/ex0730.Rd
===================================================================
--- pkg/Sleuth3/man/ex0730.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0730.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -26,7 +26,7 @@
Evaluation of Edison/Mitofsky Election System 2004 prepared by Edison Media
Research and Mitofsky International for the National Election Pool (NEP),
January 15, 2005.
- \url{http://abcnews.go.com/images/Politics/EvaluationofEdisonMitofskyElectionSystem.pdf}
+ \url{https://abcnews.go.com/images/Politics/EvaluationofEdisonMitofskyElectionSystem.pdf}
}
\seealso{
\code{\link{ex0729}}
Modified: pkg/Sleuth3/man/ex0820.Rd
===================================================================
--- pkg/Sleuth3/man/ex0820.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0820.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -53,7 +53,7 @@
Economics, Princeton University. See also Simon Jackman (2011). pscl: Classes
and Methods for R Developed in the Political Science Computational Laboratory,
Stanford University. Department of Political Science, Stanford University.
- Stanford, California. R package version 1.03.10. \code{http://pscl.stanford.edu/}
+ Stanford, California. R package version 1.03.10. \url{https://github.com/atahk/pscl/}
}
\examples{
str(ex0820)
Modified: pkg/Sleuth3/man/ex0828.Rd
===================================================================
--- pkg/Sleuth3/man/ex0828.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0828.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -23,7 +23,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0330}}, \code{\link{ex0331}},
Modified: pkg/Sleuth3/man/ex0921.Rd
===================================================================
--- pkg/Sleuth3/man/ex0921.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0921.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -10,7 +10,7 @@
the percentage of organic matter in the food, after accounting for the effect
of species weight and to describe the association.
}
-\usage{ex0922}
+\usage{ex0921}
\format{
A data frame with 19 observations on the following 4 variables.
\describe{
Modified: pkg/Sleuth3/man/ex0923.Rd
===================================================================
--- pkg/Sleuth3/man/ex0923.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex0923.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -29,7 +29,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0330}}, \code{\link{ex0331}},
Modified: pkg/Sleuth3/man/ex1028.Rd
===================================================================
--- pkg/Sleuth3/man/ex1028.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1028.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -33,7 +33,7 @@
\references{
Data were gathered by William Gray of Colorado State University and
reported on USA Today weather page:
- \code{http://www.usatoday.com/weather/whurnum.htm}
+ http://www.usatoday.com/weather/whurnum.htm
}
\examples{
str(ex1028)
Modified: pkg/Sleuth3/man/ex1029.Rd
===================================================================
--- pkg/Sleuth3/man/ex1029.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1029.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -31,11 +31,7 @@
\references{
Bierens, H.J. and Ginther, D.K. (2001). Integrated Conditional Moment
Testing of Quantile Regression Models, \emph{Empirical Economics}
- \bold{26}(1): 307--324; see
-
- \code{http://econ.la.psu.edu/~hbierens/QUANTILE.PDF}
-
- \code{http://econ.la.psu.edu/~hbierens/MEDIAN.HTM}
+ \bold{26}(1): 307--324, \doi{10.1007/s001810000059}.
}
\examples{
str(ex1029)
Modified: pkg/Sleuth3/man/ex1030.Rd
===================================================================
--- pkg/Sleuth3/man/ex1030.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1030.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -49,7 +49,7 @@
}
\references{
U.S. Bureau of Labor Statistics and U.S. Bureau of the Census: Current
- Population Survey, March 2011 \url{http://www.bls.gov/cps}
+ Population Survey, March 2011 \url{https://www.bls.gov/cps}
}
\examples{
str(ex1030)
Modified: pkg/Sleuth3/man/ex1033.Rd
===================================================================
--- pkg/Sleuth3/man/ex1033.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1033.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -33,7 +33,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0330}}, \code{\link{ex0331}},
Modified: pkg/Sleuth3/man/ex1223.Rd
===================================================================
--- pkg/Sleuth3/man/ex1223.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1223.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -57,7 +57,7 @@
}
\references{
National Longitudinal Survey of Youth, U.S. Bureau of Labor Statistics,
- \url{http://www.bls.gov/nls/home.htm} (May 8, 2008).
+ \url{https://www.bls.gov/nls/home.htm} (May 8, 2008).
}
\seealso{
\code{\link{ex0222}}, \code{\link{ex0330}}, \code{\link{ex0331}},
Modified: pkg/Sleuth3/man/ex1225.Rd
===================================================================
--- pkg/Sleuth3/man/ex1225.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1225.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -37,7 +37,7 @@
}
\references{
U.S. Bureau of Labor Statistics and U.S. Bureau of the Census: Current
- Population Survey, March 2011 \url{http://www.bls.gov/cps/data.htm}
+ Population Survey, March 2011 \url{https://www.bls.gov/cps/data.htm}
July 25, 2011.
}
\examples{
Modified: pkg/Sleuth3/man/ex1507.Rd
===================================================================
--- pkg/Sleuth3/man/ex1507.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1507.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -25,7 +25,7 @@
\references{
Jones, P.D., D. E. Parker, T. J. Osborn, and K. R. Briffa, (2011) Global
and Hemispheric Temperature Anomalies and and Marine Instrumental Records,
- CDIAC, \url{http://cdiac.ornl.gov/trends/temp/jonescru/jones.html},
+ CDIAC, http://cdiac.ornl.gov/trends/temp/jonescru/jones.html,
Aug 4, 2011
}
\examples{
Modified: pkg/Sleuth3/man/ex1518.Rd
===================================================================
--- pkg/Sleuth3/man/ex1518.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex1518.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -24,7 +24,7 @@
}
\references{
Center for Disease Control,\cr
- \url{http://www.cdc.gov/vaccines/pubs/pinkbook/downloads/appendices/G/cases-deaths.pdf}
+ \url{https://www.cdc.gov/vaccines/pubs/pinkbook/downloads/appendices/G/cases-deaths.pdf}
retrieved on July 23, 2009
}
\examples{
Modified: pkg/Sleuth3/man/ex2226.Rd
===================================================================
--- pkg/Sleuth3/man/ex2226.Rd 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/man/ex2226.Rd 2024-01-24 06:27:37 UTC (rev 82)
@@ -27,7 +27,7 @@
Course in Methods of Data Analysis (3rd ed)}, Cengage Learning.
}
\references{
- Wikipedia: \url{http://en.wikipedia.org/wiki/Planet}
+ Wikipedia: \url{https://en.wikipedia.org/wiki/Planet}
August 10, 2011
}
\seealso{
Modified: pkg/Sleuth3/vignettes/chapter01-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter01-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter01-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 01, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
Modified: pkg/Sleuth3/vignettes/chapter02-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter02-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter02-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 02, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -44,13 +44,13 @@
\begin{lrbox}{\fmbox}
\begin{minipage}{#1}
\vspace*{.02\tempfmlength}
- \hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \hfill
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -70,7 +70,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -77,7 +77,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
Modified: pkg/Sleuth3/vignettes/chapter03-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter03-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter03-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 03, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -44,13 +44,13 @@
\begin{lrbox}{\fmbox}
\begin{minipage}{#1}
\vspace*{.02\tempfmlength}
- \hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \hfill
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -70,7 +70,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -77,7 +77,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
Modified: pkg/Sleuth3/vignettes/chapter04-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter04-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter04-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 04, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
Modified: pkg/Sleuth3/vignettes/chapter05-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter05-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter05-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 05, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -43,14 +43,14 @@
\setlength{\tempfmlength}{#1}
\begin{lrbox}{\fmbox}
\begin{minipage}{#1}
- \vspace*{.02\tempfmlength}
- \hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \vspace*{.02\tempfmlength}
+ \hfill
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -70,7 +70,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -77,7 +77,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
Modified: pkg/Sleuth3/vignettes/chapter06-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter06-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter06-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 06, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
Modified: pkg/Sleuth3/vignettes/chapter07-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter07-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter07-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 07, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
Modified: pkg/Sleuth3/vignettes/chapter08-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter08-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter08-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 08, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -46,13 +46,13 @@
\begin{lrbox}{\fmbox}
\begin{minipage}{#1}
\vspace*{.02\tempfmlength}
- \hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \hfill
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -72,7 +72,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -79,7 +79,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
Modified: pkg/Sleuth3/vignettes/chapter09-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter09-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter09-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 09, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -43,14 +43,14 @@
\setlength{\tempfmlength}{#1}
\begin{lrbox}{\fmbox}
\begin{minipage}{#1}
- \vspace*{.02\tempfmlength}
- \hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \vspace*{.02\tempfmlength}
+ \hfill
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -70,7 +70,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -77,7 +77,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
Modified: pkg/Sleuth3/vignettes/chapter10-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter10-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter10-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 10, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -43,14 +43,14 @@
\setlength{\tempfmlength}{#1}
\begin{lrbox}{\fmbox}
\begin{minipage}{#1}
- \vspace*{.02\tempfmlength}
- \hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \vspace*{.02\tempfmlength}
+ \hfill
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -70,7 +70,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -77,7 +77,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
Modified: pkg/Sleuth3/vignettes/chapter11-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter11-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter11-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 11, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
Modified: pkg/Sleuth3/vignettes/chapter12-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter12-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter12-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 12, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -44,13 +44,13 @@
\begin{lrbox}{\fmbox}
\begin{minipage}{#1}
\vspace*{.02\tempfmlength}
- \hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \hfill
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -70,7 +70,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -77,7 +77,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
@@ -106,13 +106,13 @@
dev="pdf",
fig.path="figures/",
fig.height=3,
- fig.width=4,
- out.width=".47\\textwidth",
- fig.keep="high",
- fig.show="hold",
- fig.align="center",
- prompt=TRUE, # show the prompts; but perhaps we should not do this
- comment=NA # turn off commenting of ouput (but perhaps we should not do this either
+ fig.width=4,
+ out.width=".47\\textwidth",
+ fig.keep="high",
+ fig.show="hold",
+ fig.align="center",
+ prompt=TRUE, # show the prompts; but perhaps we should not do this
+ comment=NA # turn off commenting of ouput (but perhaps we should not do this either
)
require(Sleuth3)
require(mosaic)
Modified: pkg/Sleuth3/vignettes/chapter13-HortonMosaic.Rnw
===================================================================
--- pkg/Sleuth3/vignettes/chapter13-HortonMosaic.Rnw 2024-01-24 06:25:40 UTC (rev 81)
+++ pkg/Sleuth3/vignettes/chapter13-HortonMosaic.Rnw 2024-01-24 06:27:37 UTC (rev 82)
@@ -1,4 +1,4 @@
-%\VignetteEngine{knitr}
+%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Chapter 13, Horton et al. using mosaic}
%\VignettePackage{Sleuth3}
\documentclass[11pt]{article}
@@ -45,12 +45,12 @@
\begin{minipage}{#1}
\vspace*{.02\tempfmlength}
\hfill
- \begin{minipage}{.95 \tempfmlength}}
- {\end{minipage}\hfill
- \vspace*{.015\tempfmlength}
- \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
- \medskip
- }
+ \begin{minipage}{.95 \tempfmlength}}
+ {\end{minipage}\hfill
+ \vspace*{.015\tempfmlength}
+ \end{minipage}\end{lrbox}\fbox{\usebox{\fmbox}}
+ \medskip
+ }
\newenvironment{boxedText}[1][.98\textwidth]%
@@ -70,7 +70,7 @@
\begin{center}
\begin{fmpage}{.98\textwidth}
\begin{center}
- \sf \large Box~\expandafter\thetable. #2
+ \sf \large Box~\expandafter\thetable. #2
\end{center}
\medskip
}%
@@ -77,7 +77,7 @@
{%
\end{fmpage}
\end{center}
-\end{table} % need to do something about exercises that follow boxedTable
+\end{table} % need to do something about exercises that follow boxedTable
}
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