[Seqinr-commits] r2122 - pkg/man

[noreply at r-forge.r-project.org]

Author: simonpenel
Date: 2021-05-20 11:41:25 +0200 (Thu, 20 May 2021)
New Revision: 2122

Modified:
   pkg/man/dist.alignment.Rd
Log:
More details on dist.alignment in the doc

Modified: pkg/man/dist.alignment.Rd
===================================================================
--- pkg/man/dist.alignment.Rd	2021-05-20 09:23:54 UTC (rev 2121)
+++ pkg/man/dist.alignment.Rd	2021-05-20 09:41:25 UTC (rev 2122)
@@ -8,6 +8,8 @@
   The resulting matrix contains the squared root of the pairwise distances.
   For example, if identity between 2 sequences is 80%, the matrix will gives
   the squared root of (1.0 - 0.8) i.e. 0.4472136.
+  Note: seqinr::dist.alignment is the square root version of ape::dist.gene (and
+  not ape::dist.dna).
 
 }
 \usage{