[Seqinr-commits] r1885 - pkg/R

[noreply at r-forge.r-project.org]

Author: jeanlobry
Date: 2016-06-02 11:18:04 +0200 (Thu, 02 Jun 2016)
New Revision: 1885

Modified:
   pkg/R/oriloc.R
Log:
updating file names

Modified: pkg/R/oriloc.R
===================================================================
--- pkg/R/oriloc.R	2016-06-02 08:46:59 UTC (rev 1884)
+++ pkg/R/oriloc.R	2016-06-02 09:18:04 UTC (rev 1885)
@@ -6,8 +6,8 @@
 ########################################################################
 
 oriloc <- function(
-  seq.fasta = "ftp://pbil.univ-lyon1.fr/pub/seqinr/data/ct.fasta",
-  g2.coord = "ftp://pbil.univ-lyon1.fr/pub/seqinr/data/ct.predict",
+  seq.fasta = system.file("sequences/ct.fasta", package ="seqinr"),
+  g2.coord = system.file("sequences/ct.predict", package = "seqinr"),
   glimmer.version = 3,
   oldoriloc = FALSE,
   gbk = NULL,