[Seqinr-commits] r1806 - www/src/mainmatter

[noreply at r-forge.r-project.org]

Author: jeanlobry
Date: 2014-06-11 11:01:19 +0200 (Wed, 11 Jun 2014)
New Revision: 1806

Modified:
   www/src/mainmatter/querylang.rnw
   www/src/mainmatter/querylang.tex
Log:
NS and NK are now documented

Modified: www/src/mainmatter/querylang.rnw
===================================================================
--- www/src/mainmatter/querylang.rnw	2014-06-10 20:30:31 UTC (rev 1805)
+++ www/src/mainmatter/querylang.rnw	2014-06-11 09:01:19 UTC (rev 1806)
@@ -214,6 +214,32 @@
 closebank()
 @
 
+\subsection{\texttt{NS=taxon\_name}}
+
+This is used to get the number of taxon of given name, with the use of the at sign @ to 
+substitute as a wildcard character for any zero or more characters 
+possible here. For instance, we want to know how many taxon have \textit{sapiens} inside~:
+
+<<exampleNS,fig=F,eval=T>>=
+choosebank("emblTP")
+query("NSexample","NS=@sapiens@")
+NSexample
+closebank()
+@
+
+\subsection{\texttt{NK=keyword\_name}}
+
+This is used to get the number of keyword of given name, with the use of the at sign @ to 
+substitute as a wildcard character for any zero or more characters 
+possible here. For instance, we want to know how many keywords have \textit{sex} inside~:
+
+<<exampleNK,fig=F,eval=T>>=
+choosebank("emblTP")
+query("NKexample","NK=@sex@")
+NKexample
+closebank()
+@
+
 \subsection{\texttt{Y=year} or \texttt{Y>year} or \texttt{Y<year}}
 
 This is used to select sequences published in a given year (\texttt{Y=year}),

Modified: www/src/mainmatter/querylang.tex
===================================================================
--- www/src/mainmatter/querylang.tex	2014-06-10 20:30:31 UTC (rev 1805)
+++ www/src/mainmatter/querylang.tex	2014-06-11 09:01:19 UTC (rev 1806)
@@ -495,6 +495,46 @@
 \end{Sinput}
 \end{Schunk}
 
+\subsection{\texttt{NS=taxon\_name}}
+
+This is used to get the number of taxon of given name, with the use of the at sign @ to 
+substitute as a wildcard character for any zero or more characters 
+possible here. For instance, we want to know how many taxon have \textit{sapiens} inside~:
+
+\begin{Schunk}
+\begin{Sinput}
+ choosebank("emblTP")
+ query("NSexample","NS=@sapiens@")
+ NSexample
+\end{Sinput}
+\begin{Soutput}
+26 SP for NS=@sapiens@
+\end{Soutput}
+\begin{Sinput}
+ closebank()
+\end{Sinput}
+\end{Schunk}
+
+\subsection{\texttt{NK=keyword\_name}}
+
+This is used to get the number of keyword of given name, with the use of the at sign @ to 
+substitute as a wildcard character for any zero or more characters 
+possible here. For instance, we want to know how many keywords have \textit{sex} inside~:
+
+\begin{Schunk}
+\begin{Sinput}
+ choosebank("emblTP")
+ query("NKexample","NK=@sex@")
+ NKexample
+\end{Sinput}
+\begin{Soutput}
+277 KW for NK=@sex@
+\end{Soutput}
+\begin{Sinput}
+ closebank()
+\end{Sinput}
+\end{Schunk}
+
 \subsection{\texttt{Y=year} or \texttt{Y>year} or \texttt{Y<year}}
 
 This is used to select sequences published in a given year (\texttt{Y=year}),
@@ -1189,7 +1229,7 @@
 There were two compilation steps:
 
 \begin{itemize}
-  \item \Rlogo{} compilation time was: Fri Jun  6 21:34:45 2014
+  \item \Rlogo{} compilation time was: Wed Jun 11 10:58:16 2014
   \item \LaTeX{} compilation time was: \today
 \end{itemize}