[Seqinr-commits] CDS translation into Protein
ayman sabry
amsabry at gmail.com
Fri Jun 28 13:23:43 CEST 2013
Dear!
I am using the query function to extract CDS from the refseq
for example
"system.time(query("TSC5","AC=NM_001162427 AND t=cds AND NOT k=partial"))"
But I also want the corresponding proteins.
For some reason the"extractseqs("TSC5", operation = "translate")"
does not work
Does anyone aware of any R function or package that could i use to do that translation
Thanks in advance
ayman
********************************************
Ayman Sabry, Ph.D.
Assistant Professor,
Biotechnology & Genetic Engineering unit,
Scientific Research Deanship
Taif University,
Al-Hawya, Al Taif, Zip code 21974, KSA
mobile # +966 05 920 46 007
Fax # +966 2 724 1880
amsabry at gmail.com
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/seqinr-commits/attachments/20130628/69379898/attachment.html>
More information about the Seqinr-commits
mailing list