[Seqinr-commits] r1735 - pkg/man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Sun Mar 7 11:03:59 CET 2010
Author: lobry
Date: 2010-03-07 11:03:59 +0100 (Sun, 07 Mar 2010)
New Revision: 1735
Modified:
pkg/man/count.Rd
Log:
word -> wordsize
Modified: pkg/man/count.Rd
===================================================================
--- pkg/man/count.Rd 2010-03-06 17:55:01 UTC (rev 1734)
+++ pkg/man/count.Rd 2010-03-07 10:03:59 UTC (rev 1735)
@@ -6,11 +6,11 @@
sequence. Note that the oligomers are overlapping by default.
}
\usage{
-count(seq, word, start = 0, by = 1, freq = FALSE, alphabet = s2c("acgt"), frame = start)
+count(seq, wordsize, start = 0, by = 1, freq = FALSE, alphabet = s2c("acgt"), frame = start)
}
\arguments{
\item{seq}{a vector of single characters.}
- \item{word}{an integer giving the size of word (n-mer) to count.}
+ \item{wordsize}{an integer giving the size of word (n-mer) to count.}
\item{start}{an integer (0, 1, 2,...) giving the starting
position to consider in the sequence. The default value 0 means that
we start at the first nucleotide in the sequence.}
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