[Seqinr-commits] r1723 - pkg/inst/doc/src/appendix

[noreply at r-forge.r-project.org]

Author: lobry
Date: 2010-02-20 18:49:22 +0100 (Sat, 20 Feb 2010)
New Revision: 1723

Modified:
   pkg/inst/doc/src/appendix/releasenotes.rnw
Log:
fixing Oliver Clay bug

Modified: pkg/inst/doc/src/appendix/releasenotes.rnw
===================================================================
--- pkg/inst/doc/src/appendix/releasenotes.rnw	2010-02-20 17:48:35 UTC (rev 1722)
+++ pkg/inst/doc/src/appendix/releasenotes.rnw	2010-02-20 17:49:22 UTC (rev 1723)
@@ -20,6 +20,13 @@
 
 \begin{itemize}
 
+\item As pointed by Oliver Clay and Lionel Guy on the seqinr diffusion
+list on 19-FEB-2010 there was a bug in \texttt{getSequence.list()}
+function that confused \texttt{write.fasta()} when all sequences were
+of the same length (a similar bug was reported by Yann Lesecque
+on 30-MAR-2009 for the \texttt{getTrans()} function). This now
+fixed.
+
 \item The message printed when function \texttt{where.is.this.acc()} fails
 to find a database with a given accession number for a sequence is now
 completed to warn the user that (s)he may have supplied a sequence name
@@ -27,8 +34,8 @@
 
 \item The title in the documentation for the function \texttt{write.fasta()}
 was changed to make clear that more than one sequence can be written at once.
-The function now does not return anything instead of \texttt{NULL}. The argument
-\texttt{file.out} was move to the left so that it is easier now use
+The function now does not return anything instead of \texttt{NULL} previously.
+The argument \texttt{file.out} was move to the left so that it is easier now use
 it by position during function call.
 
 \end{itemize}