[Sedar-commits] how to install packfor?

[Alison Ravenscraft]

Hi all,

I am trying to install the package "packfor," but can't get it to load.  I have tried:
install.packages("packfor", repos="http://r-forge.r-project.org")
install.packages('~/Downloads/packfor_0.0-8.tar', repos = NULL, type="source")

Neither command works.  The second command generates a long string of errors and warnings, which I have pasted at the end of this message.

Could someone please advise me how to get this package installed? I am on a Mac OS 10.9.1 and I'm using the most current version of R (3.0.2).

Many apologies if this question has been asked before,
Alison

> install.packages('~/Downloads/packfor_0.0-8.tar', repos = NULL, type="source")
* installing *source* package ‘packfor’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c forward.c -o forward.o
forward.c:411:3: warning: implicit declaration of function 'dgesvd_' is invalid in C99 [-Wimplicit-function-declaration]
  F77_CALL(dgesvd)(&jobu, &jobvt,&size, &size,A, &size, D,U,&size,V,&size,&work1, &lwork,&error);
  ^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:82:22: note: expanded from macro 'F77_CALL'
# define F77_CALL(x)    x ## _
                        ^
<scratch space>:205:1: note: expanded from here
dgesvd_
^
forward.c:421:43: warning: data argument not used by format string [-Wformat-extra-args]
      fprintf(stderr, "error in dinvG: ", error);
                      ~~~~~~~~~~~~~~~~~~  ^
/Library/Frameworks/R.framework/Resources/include/R_ext/Error.h:51:15: note: expanded from macro 'error'
#define error Rf_error
              ^
2 warnings generated.
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o packfor.so forward.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64 -L/usr/local/lib/x86_64 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: directory not found for option '-L/usr/local/lib'
ld: warning: Warning message:
In install.packages("~/Downloads/packfor_0.0-8.tar", repos = NULL,  :
  installation of package ‘/Users/alison/Downloads/packfor_0.0-8.tar’ had non-zero exit status
directory not found for option '-L/usr/local/lib'
ld: warning: directory not found for option '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64'
ld: warning: directory not found for option '-L/usr/local/lib/x86_64'
ld: warning: directory not found for option '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3'
ld: library not found for -lgfortran
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [packfor.so] Error 1
ERROR: compilation failed for package ‘packfor’
* removing ‘/Library/Frameworks/R.framework/Versions/3.0/Resources/library/packfor’