[Rsiena-help] Possible error with multi-core estimation in rev. 119

Guido Conaldi conaldi at gmail.com
Sun Oct 17 14:13:44 CEST 2010


Dear Ruth,

First of all, sorry for the long delay, but the home server I usually
use for my analyses was down and I only recently managed to revive it.

I have just tried to access R-forge both to test the latest revision and
to prepare for tomorrow's seminar, but the RSiena repo seems to be down.
Is it a problem from my part? R-forge seems to be up and running.

Regards,
Guido

On Thu, 2010-09-23 at 14:40 +0100, Ruth M. Ripley wrote:
> Dear Guido,
> 
> I have corrected RSiena on r-forge.
> 
> Please would you check the new version of RSienaTest for me (rev.120). If 
> it fails please would you tell me what sort of model you are fitting. 
> one-mode/bipartite/behavior variables/covariates/effects...
> 
> Regards,
> 
> Ruth
> 
> 
> On Tue, 31 Aug 2010, Guido Conaldi wrote:
> 
> > Dear Ruth,
> >
> > RSienaTest keeps crashing when I try estimating my models:
> >
> > *** glibc detected *** /usr/lib64/R/bin/exec/R: free(): invalid next
> > size (fast): 0x000000000506b9f0 ***
> >
> > I can save the backtrace for later inspection if that may help.
> >
> > However, I patched and build the tar ball as you suggested and
> > multi-core is working fine again.
> >
> > Thank you very much and enjoy your holiday,
> > Regards,
> > Guido
> >
> > On Tue, 2010-08-31 at 11:58 +0100, Ruth M. Ripley wrote:
> >> Dear Guido,
> >>
> >> As Tom says, I am on holiday. But I know what the bug is and it should not
> >> exist in RSienaTest. Please try using RSienaTest from R-forge. It should
> >> give the same answers for one core and not fail for more than one.
> >>
> >> Alternatively, if you are able to unpack the tar ball and build the
> >> package yourself, try making a one line change to R/simstatsc.r. After
> >> line 1762, which is
> >>
> >> nGroup <- ff$nGroup
> >>
> >> add
> >>
> >> types <- ff$types
> >>
> >> and rebuild.
> >>
> >> I will sort RSiena out when I get back to work.
> >>
> >> Regards,
> >>
> >> Ruth
> >>
> >> On Tue, 31 Aug 2010, Guido Conaldi wrote:
> >>
> >>> Dear Ruth,
> >>>
> >>> I updated to rev.119 and since then I experience an error if I try to
> >>> use more than one core (3 in this case, as you can see):
> >>>
> >>> Error in checkForRemoteErrors(lapply(cl, recvResult)) :
> >>> 3 nodes produced errors; first error: object 'types' not found
> >>>
> >>> With one core, estimation seems to be running fine.
> >>>
> >>> I hope you can help,
> >>> Regards
> >>> Guido
> >>>
> >>> _______________________________________________
> >>> Rsiena-help mailing list
> >>> Rsiena-help at lists.r-forge.r-project.org
> >>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rsiena-help
> >>>
> >
> >
> >
> >




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