[Rquantlib-devel] RQuantLib on Mac OS X 10.10
Dirk Eddelbuettel
edd at debian.org
Sat Aug 6 23:58:29 CEST 2016
Ben,
On 6 August 2016 at 23:37, Benjamin Voigt wrote:
| thank you. This solved the issue on my side. I have just been adding the following line into my .R/Makevars:
| CXXFLAGS += -stdlib=libstdc++
|
| After that "install.packages("RQuantLib", type="source”)” worked - except for numerous boost warnings.
Well the question is: does every OS X system needs this now? If so, I
should add it via configure. If not, then maybe just your compiler set up is
unusual?
(And yes, Boost generates a lot of line noise, sadly.)
Dirk
| I am not exactly sure why this needs to be present. Seems to be related to c++11 support. Some discussion here:
| http://stackoverflow.com/questions/19774778/when-is-it-necessary-to-use-use-the-flag-stdlib-libstdc
|
| @George: Did the .R/Makevars change resolve you issue too?
|
| Regards,
| Ben
|
| > On 06 Aug 2016, at 17:31, Dirk Eddelbuettel <edd at debian.org> wrote:
| >
| >
| > On 6 August 2016 at 15:45, Benjamin Voigt wrote:
| > | George,
| > |
| > | it’s been a while (before OS X.11) since I have used RQuantLib. I have tried a
| > | fresh build today following the guide at QuantLib (http://quantlib.org/install/
| > | macosx.shtml). When trying an example of QuantLib I had to add the compiler
| > | flag "-stdlib=libstdc++” or else I would get an “architecture x86_64” error.
| > | When trying to install RQuantLib from source I noticed that this flag is
| > | missing. Perhaps that is something to try to see if you have the same issue.
| > |
| > | If you know how to add "-stdlib=libstdc++” to the build compiler flags for
| > | RQuantLib I believe that should solve your issues, and mine for that matter :)
| >
| > Weird.
| >
| > Why do we need this here, and not for any of the other C++ using packages on CRAN?
| >
| > Short tip: You can set it locally outside the package via something like this:
| >
| > edd at max:~$ grep ^CXX.*FLAGS .R/Makevars
| > CXXFLAGS += -O3 -Wall -pipe -Wno-unused
| > CXX1XFLAGS=-O3 -Wall -pipe -Wno-unused
| > edd at max:~$
| >
| > It will affect all your C++ builds for R.
| >
| > | If I find some time tomorrow I will try to dig into that a little more…
| >
| > I would appreciate this. We can add it easily via configure -- but I would
| > like to know why we need it.
| >
| > Dirk
| >
| > | Regards,
| > | Ben
| > |
| > |
| > |
| > | On 06 Aug 2016, at 05:46, George <grandtiger at gmail.com> wrote:
| > |
| > | Following is the error, when I try to install RQuantLib using the command
| > | below.
| > |
| > | install.packages("https://cran.r-project.org/src/contrib/
| > | RQuantLib_0.4.2.tar.gz", repo=NULL, type='source', configure.args=
| > | "--with-boost-include=/opt/local/include/ --with-boost-lib=/opt/local/lib/
| > | ")
| > |
| > | I wonder anyone has experience with this, and whether there is a solution.
| > | Thanks a lot and have a great weekend!
| > |
| > | ############################################
| > |
| > | 66 warnings generated.
| > |
| > | clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined
| > | dynamic_lookup -single_module -multiply_defined suppress -L/Library/
| > | Frameworks/R.framework/Resources/lib -L/usr/local/lib -o RQuantLib.so
| > | RcppExports.o asian.o barrier_binary.o bermudan.o bonds.o calendars.o
| > | curves.o dates.o daycounter.o discount.o hullwhite.o implieds.o modules.o
| > | schedule.o utils.o vanilla.o zero.o -L/opt/local/lib -L/opt/local/lib
| > | -lQuantLib -L/opt/local/lib/ -F/Library/Frameworks/R.framework/..
| > | -framework R -Wl,-framework -Wl,CoreFoundation
| > |
| > | installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/
| > | library/RQuantLib/libs
| > |
| > | ** R
| > |
| > | ** demo
| > |
| > | ** inst
| > |
| > | ** preparing package for lazy loading
| > |
| > | ** help
| > |
| > | *** installing help indices
| > |
| > | ** building package indices
| > |
| > | ** testing if installed package can be loaded
| > |
| > | Error in dyn.load(file, DLLpath = DLLpath, ...) :
| > |
| > | unable to load shared object '/Library/Frameworks/R.framework/Versions/
| > | 3.3/Resources/library/RQuantLib/libs/RQuantLib.so':
| > |
| > | dlopen(/Library/Frameworks/R.framework/Versions/3.3/Resources/library/
| > | RQuantLib/libs/RQuantLib.so, 6): Symbol not found:
| > | __ZN8QuantLib13FixedRateBondC1EjdRKNS_8ScheduleERKNSt3__16vectorIdNS4_9allocatorIdEEEERKNS_10DayCounterENS_21BusinessDayConventionEdRKNS_4DateERKNS_8CalendarERKNS_6PeriodESK_SE_b
| > |
| > | Referenced from: /Library/Frameworks/R.framework/Versions/3.3/Resources/
| > | library/RQuantLib/libs/RQuantLib.so
| > |
| > | Expected in: flat namespace
| > |
| > | in /Library/Frameworks/R.framework/Versions/3.3/Resources/library/
| > | RQuantLib/libs/RQuantLib.so
| > |
| > | Error: loading failed
| > |
| > | Execution halted
| > |
| > | ERROR: loading failed
| > |
| > | * removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/
| > | RQuantLib’
| > |
| > | Warning message:
| > |
| > | In install.packages("https://cran.r-project.org/src/contrib/
| > | RQuantLib_0.4.2.tar.gz", :
| > |
| > | installation of package ‘/tmp/RtmpNWaFiC/downloaded_packages/
| > | RQuantLib_0.4.2.tar.gz’ had non-zero exit status
| > |
| > | > clang: error: invalid library name in argument '-stdlib=libstdc'clang:
| > | error: invalid library name in argument '-stdlib=libstdc'clang: error:
| > | invalid library name in argument '-stdlib=libstdc'clang: error: invalid
| > | library name in argument '-stdlib=libstdc'if installed package can be
| > | loadedclang: error: invalid library name in argument '-stdlib=
| > | libstdc'clang: error: invalid library name in argument '-stdlib=
| > | libstdc'clang: error: invalid library name in argument '-stdlib=
| > | libstdc'clang: error: invalid library name in argument '-stdlib=
| > | libstdc'clang: error: invalid library name in argument '-stdlib=
| > | libstdc'clan
| > |
| > | Error: unexpected symbol in "clang: error: invalid library"
| > |
| > | > if installed package can be loaded
| > |
| > | Error: unexpected symbol in "if installed"
| > |
| > | > if installed package can be loaded
| > |
| > | Error: unexpected symbol in "if installed"
| > |
| > | > if installed package can be loaded
| > |
| > | Error: unexpected symbol in "if installed"
| > |
| > | > if installed package can be loaded
| > |
| > | Error: unexpected symbol in "if installed"
| > |
| > | > if installed package can be loaded
| > |
| > | Error: unexpected symbol in "if installed"
| > |
| > |
| > | On Fri, Aug 5, 2016 at 7:17 AM, George Wang <grandtiger at gmail.com> wrote:
| > |
| > | Hi Ben,
| > |
| > | Do you have any quick guide for building and installing RQuantLib on
| > | Mac OSX? I was able to use macport to install boost and build QuantLib,
| > | but when I try to install RQuantLib from source, I always got errors
| > | (can provide more details when I get home tonight). I am wondering how
| > | you get it to work. Thanks a lot and have a great weekend!
| > |
| > | Regards,
| > | George
| > |
| > | Sent from my iPhone
| > |
| > | On Oct 28, 2014, at 5:01 PM, Benjamin J. J. Voigt <bvoigt at gmail.com>
| > | wrote:
| > |
| > |
| > | Hi,
| > |
| > | first post, bear with me.
| > |
| > | On this matter, it works fine on 10.9.x. RStudio seems to have
| > | fixed on their end. Since I have recently rebuilt both QuantLib and
| > | RQuantLib several times on stable and development sources on my
| > | 10.9.x environment just running RQuantLib has never been an issue.
| > |
| > | As a workaround, perhaps you could try to create a script to launch
| > | through the terminal so that the environment variables are loaded
| > | properly?
| > |
| > | Regards,
| > | Ben
| > |
| > | On Tue, Oct 28, 2014 at 6:41 PM, Dirk Eddelbuettel <edd at debian.org>
| > | wrote:
| > |
| > |
| > | On 28 October 2014 at 11:35, Jack Drew wrote:
| > | | Recently, I am trying to create a new RQuantLib setup. I am
| > | on mac os x 10.10 and R 3.0.2. I have installed QuantLib 1.4,
| > | and RQuantLib. From my terminal, within R, I can require
| > | RQuantLib and use it with no problems. However, if I try to
| > | require RQuantLib within the R GUI or within my StatET Eclipse,
| > | I get:
| > | |
| > | | Loading required package: RQuantLib
| > | | Error : .onLoad failed in loadNamespace() for 'RQuantLib',
| > | details:
| > | | call: if (is.character(qc) && nchar(qc) > 1) {
| > | | error: missing value where TRUE/FALSE needed
| > | | In addition: Warning message:
| > | | running command 'bash -c 'type -p quantlib-config' 2>/dev/
| > | null' had status 1
| > | |
| > | | I am not sure what I am missing, since the package works fine
| > | from the terminal. Please help, if you are able to.
| > |
| > | So quantlib-config is not found.
| > |
| > | I don't own (or access) an OS X machine but even I noticed all
| > | these hoopla
| > | over 10.10 not setting PATH -- that could be the culprit.
| > | Google for
| > | something like
| > |
| > | RStudio "OS X" 10.10 PATH
| > |
| > | and you just get pointers. One trick appears to be to launch
| > | RStudio from
| > | the term.app.
| > |
| > | Dirk
| > |
| > | --
| > | http://dirk.eddelbuettel.com | @eddelbuettel | edd at debian.org
| > | _______________________________________________
| > | Rquantlib-devel mailing list
| > | Rquantlib-devel at lists.r-forge.r-project.org
| > | https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/
| > | rquantlib-devel
| > |
| > |
| > |
| > |
| > | --
| > | Ben
| > |
| > | “In God we trust, all others bring data.” W. Edwards Deming
| > |
| > | _______________________________________________
| > | Rquantlib-devel mailing list
| > | Rquantlib-devel at lists.r-forge.r-project.org
| > | https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/
| > | rquantlib-devel
| > |
| > |
| > |
| > |
| > | _______________________________________________
| > | Rquantlib-devel mailing list
| > | Rquantlib-devel at lists.r-forge.r-project.org
| > | https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rquantlib-devel
| >
| > --
| > http://dirk.eddelbuettel.com | @eddelbuettel | edd at debian.org
|
--
http://dirk.eddelbuettel.com | @eddelbuettel | edd at debian.org
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