[Rprotobuf-yada] [PATCH] Add missing readASCIIFromConnection function, examples, and test

Murray Stokely mstokely at google.com
Sat Jul 16 10:16:08 CEST 2011


A minor patch for your consideration..

Add missing readASCIIFromConnection C++ function that was called in read.R
but not defined.
Add examples to the readASCII.Rd help file and tests of ascii export/import
of messages.
Remove an _ in the readASCII C++ functions to match the naming convention of
the other nearby functions.

----

Index: R/read.R
===================================================================
--- R/read.R (revision 424)
+++ R/read.R (working copy)
@@ -35,7 +35,7 @@

 setMethod( "readASCII", c( descriptor = "Descriptor" , input = "character"
),
 function(descriptor, input ){
- .Call( "Descriptor__readASCII_FromString", descriptor at pointer, input,
PACKAGE = "RProtoBuf" )
+ .Call( "Descriptor__readASCIIFromString", descriptor at pointer, input,
PACKAGE = "RProtoBuf" )
 } )

 setMethod( "readASCII", c( descriptor = "Descriptor" ),
@@ -46,8 +46,7 @@
  sc <- summary( input )
  wasopen <- identical( sc[["opened"]], "opened" )
  if( !wasopen ) open( input )
- message <- .Call( "Descriptor__readASCII_FromConnection",
descriptor at pointer, input, PACKAGE = "RProtoBuf" )
+ message <- .Call( "Descriptor__readASCIIFromConnection",
descriptor at pointer, input, PACKAGE = "RProtoBuf" )
  if( !wasopen ) close( input )
  message
 } )
-
Index: src/wrapper_Descriptor.cpp
===================================================================
--- src/wrapper_Descriptor.cpp (revision 424)
+++ src/wrapper_Descriptor.cpp (working copy)
@@ -164,12 +164,25 @@
  return( S4_Message( message ) ) ;
 }

-RCPP_FUNCTION_2( S4_Message, METHOD(readASCII_FromString),
Rcpp::XPtr<GPB::Descriptor> desc, std::string input){
+RCPP_FUNCTION_2( S4_Message, METHOD(readASCIIFromString),
Rcpp::XPtr<GPB::Descriptor> desc, std::string input){
  GPB::Message* message = PROTOTYPE( desc ) ;
  GPB::TextFormat::ParseFromString( input, message ) ;
  return( S4_Message( message ) ) ;
 }

+RCPP_FUNCTION_2( S4_Message, METHOD(readASCIIFromConnection),
Rcpp::XPtr<GPB::Descriptor> desc, int conn_id){
+ RconnectionCopyingInputStream wrapper( conn_id ) ;
+ GPB::io::CopyingInputStreamAdaptor stream( &wrapper ) ;
+
+ /* create a prototype of the message we are going to read */
+ GPB::Message* message = PROTOTYPE( desc ) ;
+ if( !message ){
+ throw std::range_error( "could not call
factory->GetPrototype(desc)->New()" ) ;
+ }
+ GPB::TextFormat::Parse( &stream, message ) ;
+ return( S4_Message( message ) ) ;
+}
+
 #undef METHOD

 } // namespace rprotobuf
Index: man/readASCII.Rd
===================================================================
--- man/readASCII.Rd (revision 424)
+++ man/readASCII.Rd (working copy)
@@ -20,4 +20,21 @@
 }
 }}
 \keyword{methods}
+\examples{
+# example file that contains a "tutorial.AddressBook" message
+book <- system.file( "examples", "addressbook.pb", package = "RProtoBuf" )

+# read the message
+message <- read( tutorial.AddressBook, book )
+
+# Output in text format to a temporary file
+out.file <- tempfile()
+writeLines( as.character(message), file(out.file))
+
+# Verify we can read back in the message from a text file.
+message2 <- readASCII( tutorial.AddressBook, file(out.file, "rb"))
+
+\dontshow{
+stopifnot( identical( message, message2) )
+}
+}
Index: inst/unitTests/runit.addressbook.R
===================================================================
--- inst/unitTests/runit.addressbook.R (revision 424)
+++ inst/unitTests/runit.addressbook.R (working copy)
@@ -29,3 +29,13 @@
     checkEquals(book$person[[2]]$phone[[1]]$number, "+01...",
 msg="Second person phone number")
     checkEquals(book$person[[2]]$phone[[1]]$type,   0,
msg="Second person phone number")
 }
+
+test.ascii <- function() {
+    # Output in text format to a temporary file
+    out.file <- tempfile()
+    writeLines( as.character(book), file(out.file))
+
+    # Verify we can read back in the message from a text file.
+    book2 <- readASCII( tutorial.AddressBook, file(out.file, "rb"))
+    checkEquals(book, book2)
+}
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