[Rodbcext-commits] r50 - in pkg/geoclimate: . R inst
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Sat Dec 21 03:59:40 CET 2013
Author: jaunario
Date: 2013-12-21 03:59:39 +0100 (Sat, 21 Dec 2013)
New Revision: 50
Added:
pkg/geoclimate/inst/GSOD.stations.csv
pkg/geoclimate/inst/GSOD.varrefs.csv
Removed:
pkg/geoclimate/inst/gsod_ref.csv
pkg/geoclimate/inst/gsod_stations.csv
Modified:
pkg/geoclimate/DESCRIPTION
pkg/geoclimate/R/gsod.r
Log:
Renamed GSOD data files in preparation for proper data loading.
Modified: pkg/geoclimate/DESCRIPTION
===================================================================
--- pkg/geoclimate/DESCRIPTION 2013-12-19 02:50:53 UTC (rev 49)
+++ pkg/geoclimate/DESCRIPTION 2013-12-21 02:59:39 UTC (rev 50)
@@ -10,3 +10,5 @@
Description: [description]
License: GPL (>=2)
LazyLoad: yes
+LazyData: yes
+
Modified: pkg/geoclimate/R/gsod.r
===================================================================
--- pkg/geoclimate/R/gsod.r 2013-12-19 02:50:53 UTC (rev 49)
+++ pkg/geoclimate/R/gsod.r 2013-12-21 02:59:39 UTC (rev 50)
@@ -6,9 +6,9 @@
# Current ftp site
GSOD.ftp <- "ftp://ftp.ncdc.noaa.gov/pub/data/gsod"
# Reference to var values for parsing downloaded data
-GSOD.varrefs <- read.csv(system.file("gsod_ref.csv", package="geoclimate"), stringsAsFactors=FALSE)
+GSOD.varrefs <- read.csv(system.file("GSOD.varrefs.csv", package="geoclimate"), stringsAsFactors=FALSE)
-GSOD.readStations <- function(stationfile=system.file("gsod_stations.csv", package="geoclimate"), rm.nodata=FALSE, rm.nocoords=TRUE){
+GSOD.readStations <- function(stationfile=system.file("GSOD.stations.csv", package="geoclimate"), rm.nodata=FALSE, rm.nocoords=TRUE){
show.message("Reading GSOD station info file.", appendLF=TRUE)
stations <- read.csv(stationfile, stringsAsFactors=FALSE)
if(rm.nodata) stations <- stations[-which(is.na(stations$BEGIN)),]
@@ -31,6 +31,7 @@
stations$END <- as.Date(as.character(stations$END), "%Y%m%d")
return(stations)
}
+
GSOD.stations <- GSOD.readStations()
GSOD.updateStations <- function(){
@@ -42,18 +43,18 @@
online <- unlist(strsplit(getURL("ftp://ftp.ncdc.noaa.gov/pub/data/inventories/"),ifelse(Sys.info()["sysname"]=="Windows","\r\n","\n")))
oinfo <- unlist(strsplit(online[grep("ISH-HISTORY.CSV$",online)],"[[:space:]]+"))
- age <- difftime(as.Date(paste(oinfo[6:7], collapse=" "), "%b %d"),file.info(system.file("gsod_stations.csv", package="geoclimate"))$ctime, units="weeks")
- size <- as.numeric(oinfo[5])-file.info(system.file("gsod_stations.csv", package="geoclimate"))$size
+ age <- difftime(as.Date(paste(oinfo[6:7], collapse=" "), "%b %d"),file.info(system.file("GSOD.stations.csv", package="geoclimate"))$ctime, units="weeks")
+ size <- as.numeric(oinfo[5])-file.info(system.file("GSOD.stations.csv", package="geoclimate"))$size
if (age>2 | size!=0){
- if(!file.copy(system.file("gsod_stations.csv", package="geoclimate"),paste(system.file("gsod_stations.csv", package="geoclimate"),".bck",sep=""),overwrite=TRUE)){
+ if(!file.copy(system.file("GSOD.stations.csv", package="geoclimate"),paste(system.file("GSOD.stations.csv", package="geoclimate"),".bck",sep=""),overwrite=TRUE)){
show.message("Unable to create station data backup file. GSOD update process aborted.", appendLF=TRUE)
} else {
show.message("Downloading station info file from GSOD FTP site.", EL=TRUE, appendLF=FALSE)
- dl.success <- withRetry(download.file("ftp://ftp.ncdc.noaa.gov/pub/data/inventories/ISH-HISTORY.CSV",system.file("gsod_stations.csv", package="geoclimate"),mode="wb"))
+ dl.success <- withRetry(download.file("ftp://ftp.ncdc.noaa.gov/pub/data/inventories/ISH-HISTORY.CSV",system.file("GSOD.stations.csv", package="geoclimate"),mode="wb"))
if (dl.success!=0){
show.message("Failed to connect GSOD FTP site.", appendLF=TRUE)
- file.copy(system.file("gsod_stations.csv.bck", package="geoclimate"),system.file("gsod_stations.csv", package="geoclimate"),overwrite=TRUE)
+ file.copy(system.file("GSOD.stations.csv.bck", package="geoclimate"),system.file("GSOD.stations.csv", package="geoclimate"),overwrite=TRUE)
}
show.message("GSOD Stations info file update complete.", EL=TRUE, appendLF=TRUE)
success <- TRUE
Copied: pkg/geoclimate/inst/GSOD.stations.csv (from rev 48, pkg/geoclimate/inst/gsod_stations.csv)
===================================================================
--- pkg/geoclimate/inst/GSOD.stations.csv (rev 0)
+++ pkg/geoclimate/inst/GSOD.stations.csv 2013-12-21 02:59:39 UTC (rev 50)
@@ -0,0 +1,31940 @@
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[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/rodbcext -r 50
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