[Rnomads-user] DODS working (for now)

Daniel Bowman danny.c.bowman at gmail.com
Wed Feb 6 04:01:49 CET 2019


Thanks,  im keeping an eye on it. I won’t be able to fix it for a few days
but if the issue persists I will handle it.

The grib interface is also down so there may be a site wide issue.

On Tue, Feb 5, 2019 at 12:18 Alexey Galda <alex.galda at gmail.com> wrote:

> Hi there,
>
> Something stopped working again. GetDODSDates(<abbrev>) returns:
>
> Error in seq.default(max(i), length(lines)) :
>>   'from' must be a finite number
>> In addition: Warning messages:
>> 1: In max(i) : no non-missing arguments to max; returning -Inf
>> 2: In max(i) : no non-missing arguments to max; returning -Inf
>
>
> Cheers,
> Alexey
>
> On Sat, 29 Dec 2018 at 09:39, Norman Guinasso <guinasso at yahoo.com> wrote:
>
>> > library (rNOMADS)
>> Loading required package: rvest
>> Loading required package: xml2
>>
>> ****
>> Welcome to rNOMADS!
>> Questions? Follow @rNOMADS_r on Twitter or send a message to
>> rnomads-user at lists.r-forge.r-project.org
>> Using rNOMADS as a data source for a publication?  Please cite it!
>> I'm an early career researcher and every citation matters.
>> ****
>>
>> > sessionInfo()
>> R version 3.5.2 (2018-12-20)
>> Platform: x86_64-pc-linux-gnu (64-bit)
>> Running under: Ubuntu 18.04.1 LTS
>>
>> Matrix products: default
>> BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
>> LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
>>
>> locale:
>>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
>> LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
>>  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
>> LC_PAPER=en_US.UTF-8       LC_NAME=C
>>  [9] LC_ADDRESS=C               LC_TELEPHONE=C
>> LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>>
>> attached base packages:
>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>
>> other attached packages:
>> [1] rNOMADS_2.4.0 rvest_0.3.2   xml2_1.2.0
>>
>> loaded via a namespace (and not attached):
>>  [1] httr_1.3.1        compiler_3.5.2    R6_2.2.2
>> magrittr_1.5      tools_3.5.2       bizdays_1.0.6     yaml_2.2.0
>>  [8] Rcpp_0.12.18      lubridate_1.7.4   stringi_1.2.4
>> timeDate_3043.102 stringr_1.3.1     jsonlite_1.5
>> > GetDODSDates("nam")
>> Error in GetDODSDates("nam") :
>>   The specified URL does not exist!  Make sure your model information is
>> correct.  It is also possible the NOMADS server is down.
>> Details:  Attempted to access https://nomads.ncep.noaa.gov:9090/dods/nam/
>> but did not succeed...
>> > traceback()
>> 2: stop(paste0("The specified URL does not exist!  Make sure your model
>> information is correct.  It is also possible the NOMADS server is down.\n",
>>        "Details:  Attempted to access ", top.url, " but did not
>> succeed..."))
>> 1: GetDODSDates("nam")
>>
>> I note that if I paste the url into the browser with http and the :9090
>> removed it works.
>>
>> Norman Guinasso
>>
>>
>> On Friday, December 28, 2018, 11:51:21 PM CST, Daniel Bowman <
>> danny.c.bowman at gmail.com> wrote:
>>
>>
>> All,
>>
>> Attached is an rNOMADS source that should keep DODS working for now.
>> I expect things to fail again when NCEP switches to https (DODS is
>> still http for some reason).  I will be fixing the html parsers to
>> hopefully avoid this from happening.  Until then, please use this
>> release for your grib and DODS needs.
>>
>> At present both my grib and dods vignettes (downloading GFS data and
>> doing some basic manipulation) are running fine with this version.
>>
>> Let me know if anything is still not working for you.
>>
>> Best,
>>
>> Danny
>>
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