[Rmesquite-commits] r6 - www

[noreply at r-forge.r-project.org]

Author: wmaddisn
Date: 2009-12-18 03:44:55 +0100 (Fri, 18 Dec 2009)
New Revision: 6

Modified:
   www/index.html
Log:


Modified: www/index.html
===================================================================
--- www/index.html	2009-12-17 23:46:54 UTC (rev 5)
+++ www/index.html	2009-12-18 02:44:55 UTC (rev 6)
@@ -26,7 +26,7 @@
 </table>
 <h1 class="style1">RMesquite package for R&nbsp;&nbsp;</h1>
 <p class="style1"><span class="style3">Hilmar Lapp &amp; Wayne Maddison</span></p>
-<p class="style4">The <em><strong>RMesquite</strong></em> package provides basic services for R to make use of functions in the evolutionary analysis system Mesquite. With <em>RMesquite</em>, R users can have access to the interactive interface of Mesquite as well as a broad array of computations in Mesquite. </p>
+<p class="style4">The <em><strong>RMesquite</strong></em> package provides basic services for R to make use of functions in the evolutionary analysis system <a href="http://mesquiteproject.org">Mesquite</a>. With <em>RMesquite</em>, R users can have access to the interactive interface of Mesquite as well as a broad array of computations in Mesquite. (A companion package, <a href="http://mesquiteproject.org/packages/Mesquite.R">Mesquite.R</a>, provides access in the reverse direction, for Mesquite to access functions in R.)</p>
 <h3 class="style4">Installation</h3>
 <p class="style4">To use RMesquite you must:</p>
 <ul class="style4">
@@ -67,7 +67,7 @@
 <p class="style4">Source code of RMesquite is available at its <a href="http://r-forge.r-project.org/scm/?group_id=213">R-Forge subversion repository</a>, where you can find the URLs to checkout the code in svn. The <a href="http://r-forge.r-project.org/projects/rmesquite/">R-Forge project page</a> has also links to nightly svn snapshots, and users and developers mailing lists.</p>
 <h3 class="style4">Citation</h3>
 <p class="style4">If you make use of Mesquite for the analysis of results, such as to estimate ancestral states, then you should cite the functions in Mesquite. Thus, we suggest a citation like this: &quot;The &lt;insert analysis name here&gt; analysis was performed by Mesquite 2.72 (Maddison &amp; Maddison, 2009), run via the RMesquite package (Lapp &amp; Maddison, 2009) from R version 2.10.0.&quot; </p>
-<p class="style4">Lapp, H. &amp; Maddison, W.P. 2009. RMesquite, an R package for transparent access to Mesquite functions. http://mesquiteproject.org/packages/Mesquite.R</p>
+<p class="style4">Lapp, H. &amp; Maddison, W.P. 2009. RMesquite, an R package for transparent access to Mesquite functions. http://rmesquite.r-forge.r-project.org</p>
 <h2 class="style4">Credits</h2>
 <p class="style4">RMesquite and <em>Mesquite.R</em> were stimulated by the <a href="http://hackathon.nescent.org/R_Hackathon_1">Comparative Methods in R Hackathon</a> at NESCent in Dec 2007, and supported by the National Evolutionary Synthesis Center (NESCent), NSF #EF-0423641.</p>
 <p><span class="style4">RMesquite is distributed under a <a href="http://www.gnu.org/licenses/old-licenses/gpl-2.0.html">GPL version 2 license</a>.</span></p>