[Remoterengine-commits] r134 - in pkg: . RemoteREngine/R RemoteREngine.test RemoteREngine.test/R RemoteREngine.test/inst RemoteREngine.test/inst/java_src RemoteREngine.test/inst/java_src/lib RemoteREngine.test/inst/java_src/lib/licences RemoteREngine.test/inst/java_src/lib/licences/TestNG RemoteREngine.test/inst/java_src/src RemoteREngine.test/inst/java_src/src/test RemoteREngine.test/inst/java_src/src/test/org RemoteREngine.test/inst/java_src/src/test/org/rosuda RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/client RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/common RemoteREngine.test/man

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Thu Sep 17 09:39:08 CEST 2009


Author: romain
Date: 2009-09-17 09:39:07 +0200 (Thu, 17 Sep 2009)
New Revision: 134

Added:
   pkg/RemoteREngine.test/
   pkg/RemoteREngine.test/DESCRIPTION
   pkg/RemoteREngine.test/NAMESPACE
   pkg/RemoteREngine.test/R/
   pkg/RemoteREngine.test/R/zzz.R
   pkg/RemoteREngine.test/configure
   pkg/RemoteREngine.test/configure.R
   pkg/RemoteREngine.test/configure.win
   pkg/RemoteREngine.test/exec/
   pkg/RemoteREngine.test/inst/
   pkg/RemoteREngine.test/inst/java_src/
   pkg/RemoteREngine.test/inst/java_src/build.properties
   pkg/RemoteREngine.test/inst/java_src/build.xml
   pkg/RemoteREngine.test/inst/java_src/lib/
   pkg/RemoteREngine.test/inst/java_src/lib/licences/
   pkg/RemoteREngine.test/inst/java_src/lib/licences/TestNG/
   pkg/RemoteREngine.test/inst/java_src/lib/licences/TestNG/LICENCE.txt
   pkg/RemoteREngine.test/inst/java_src/lib/testng-5.10-jdk15.jar
   pkg/RemoteREngine.test/inst/java_src/src/
   pkg/RemoteREngine.test/inst/java_src/src/test/
   pkg/RemoteREngine.test/inst/java_src/src/test/org/
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/client/
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/client/TestFactors.java
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/common/
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/common/RemoteREngineTestBase.java
   pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/server/
   pkg/RemoteREngine.test/inst/java_src/testng.xml
   pkg/RemoteREngine.test/man/
   pkg/RemoteREngine.test/man/RemoteREngine.test-package.Rd
Modified:
   pkg/README
   pkg/RemoteREngine/R/callback.R
Log:
initial version of test package

Modified: pkg/README
===================================================================
--- pkg/README	2009-09-17 07:34:24 UTC (rev 133)
+++ pkg/README	2009-09-17 07:39:07 UTC (rev 134)
@@ -23,7 +23,3 @@
 $ re --name test --port 1099
 $ re 
 
-
-
-
-

Modified: pkg/RemoteREngine/R/callback.R
===================================================================
--- pkg/RemoteREngine/R/callback.R	2009-09-17 07:34:24 UTC (rev 133)
+++ pkg/RemoteREngine/R/callback.R	2009-09-17 07:39:07 UTC (rev 134)
@@ -1,3 +1,7 @@
+
+callback.env <- new.env()
+callback.env$count <- 0L
+
 callback <- function( signature = "", object = NULL ){
 	
 	if( !is.character( signature ) ){

Added: pkg/RemoteREngine.test/DESCRIPTION
===================================================================
--- pkg/RemoteREngine.test/DESCRIPTION	                        (rev 0)
+++ pkg/RemoteREngine.test/DESCRIPTION	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,12 @@
+Package: RemoteREngine.test
+Type: Package
+Title: Unit test suite for the Remote R engine
+Version: 0.0-0
+Date: 2009-09-16
+Author: Romain Francois 
+Maintainer: Romain Francois <francoisromain at free.fr>
+Description: Test suite for the Remote R engine package
+License: GPL (>=3)
+LazyLoad: yes
+Depends: RemoteREngine (>= 0.0-3), ant (>= 0.0-6)
+

Added: pkg/RemoteREngine.test/NAMESPACE
===================================================================

Added: pkg/RemoteREngine.test/R/zzz.R
===================================================================
--- pkg/RemoteREngine.test/R/zzz.R	                        (rev 0)
+++ pkg/RemoteREngine.test/R/zzz.R	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,2 @@
+.onAttach <- function(libname, pkgname){}
+

Added: pkg/RemoteREngine.test/configure
===================================================================
--- pkg/RemoteREngine.test/configure	                        (rev 0)
+++ pkg/RemoteREngine.test/configure	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,4 @@
+#!/bin/bash 
+
+"${R_HOME}/bin/Rscript" --default-packages="base,utils,methods,rJava,ant" configure.R
+


Property changes on: pkg/RemoteREngine.test/configure
___________________________________________________________________
Name: svn:executable
   + *

Added: pkg/RemoteREngine.test/configure.R
===================================================================
--- pkg/RemoteREngine.test/configure.R	                        (rev 0)
+++ pkg/RemoteREngine.test/configure.R	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,13 @@
+#!/bin/env Rscript
+
+require( ant ) 
+
+rscript <- file.path( R.home(), "bin", "Rscript" )
+root <- getwd()
+dir.create( "inst/java" )
+setwd( "inst/java_src" )
+
+java_src.dir <- getwd()
+ant()
+setwd(root)
+

Added: pkg/RemoteREngine.test/configure.win
===================================================================
--- pkg/RemoteREngine.test/configure.win	                        (rev 0)
+++ pkg/RemoteREngine.test/configure.win	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,4 @@
+#!/bin/bash 
+
+"${R_HOME}/bin/Rscript" --default-packages="base,utils,methods,rJava,ant" configure.R
+


Property changes on: pkg/RemoteREngine.test/configure.win
___________________________________________________________________
Name: svn:executable
   + *

Added: pkg/RemoteREngine.test/inst/java_src/build.properties
===================================================================
--- pkg/RemoteREngine.test/inst/java_src/build.properties	                        (rev 0)
+++ pkg/RemoteREngine.test/inst/java_src/build.properties	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,14 @@
+compiler.debug=on
+compiler.debuglevel=lines,vars,source
+compiler.optimize=off
+compiler.deprecation=off
+compiler.verbose=off
+compiler.nowarn=off
+compiler.target=1.5
+compiler.source=1.5
+
+build.dir=build
+inst.dir=../java
+
+testng.jar=lib/testng-5.10-jdk15.jar
+

Added: pkg/RemoteREngine.test/inst/java_src/build.xml
===================================================================
--- pkg/RemoteREngine.test/inst/java_src/build.xml	                        (rev 0)
+++ pkg/RemoteREngine.test/inst/java_src/build.xml	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,46 @@
+<?xml version="1.0"?>
+<project default="all">
+
+	<property file="build.properties"/>
+	
+	<r-set property="client.jar">
+		system.file( "java", "RemoteREngine-client.jar", 
+			package = "RemoteREngine" )
+	</r-set>
+
+	<path id="project.classpath">
+		<pathelement location="${client.jar}" />
+		<pathelement location="${testng.jar}" />
+	</path>
+	
+	<target name="compile">
+		
+		<mkdir dir="build" />
+		<javac
+			destdir="${build.dir}"  
+			includeJavaRuntime="yes"
+			debug="${compiler.debug}"
+			debuglevel="${compiler.debuglevel}"
+			optimize="${compiler.optimize}"
+			deprecation="${compiler.deprecation}"
+			verbose="${compiler.verbose}"
+			nowarn="${compiler.nowarn}"
+			target="${compiler.target}"
+			source="${compiler.source}">
+  
+			<src path="src" />
+			<include name="**/*.java"/>
+			<classpath refid="project.classpath" />
+		</javac>
+	</target>
+	          
+	<target name="build">
+		<jar jarfile="${inst.dir}/RemoteREngine-test.jar">
+			<fileset dir="${build.dir}" />
+		</jar>
+	</target>
+	
+	<target name="all" depends="compile,build" />
+	
+</project>
+

Added: pkg/RemoteREngine.test/inst/java_src/lib/licences/TestNG/LICENCE.txt
===================================================================
--- pkg/RemoteREngine.test/inst/java_src/lib/licences/TestNG/LICENCE.txt	                        (rev 0)
+++ pkg/RemoteREngine.test/inst/java_src/lib/licences/TestNG/LICENCE.txt	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,201 @@
+                                 Apache License
+                           Version 2.0, January 2004
+                        http://www.apache.org/licenses/
+
+   TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+   1. Definitions.
+
+      "License" shall mean the terms and conditions for use, reproduction,
+      and distribution as defined by Sections 1 through 9 of this document.
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+      direction or management of such entity, whether by contract or
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+      "You" (or "Your") shall mean an individual or Legal Entity
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+   limitations under the License.

Added: pkg/RemoteREngine.test/inst/java_src/lib/testng-5.10-jdk15.jar
===================================================================
(Binary files differ)


Property changes on: pkg/RemoteREngine.test/inst/java_src/lib/testng-5.10-jdk15.jar
___________________________________________________________________
Name: svn:mime-type
   + application/octet-stream

Added: pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/client/TestFactors.java
===================================================================
--- pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/client/TestFactors.java	                        (rev 0)
+++ pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/client/TestFactors.java	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,60 @@
+package org.rosuda.REngine.remote.client;
+
+import org.testng.Assert;
+import org.testng.annotations.Test;
+
+import org.rosuda.REngine.REXP;
+import org.rosuda.REngine.REXPFactor;
+import org.rosuda.REngine.RFactor;
+import org.rosuda.REngine.remote.common.RemoteREngineTestBase;
+
+/*
+ * Copyright Stoat Software & Services 2009 <ilong at stoatsoftware.com>
+ *
+ * This file is part of the RemoteREngine project
+ *
+ * The RemoteREngine project is free software: 
+ * you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 2 of the License, or
+ * (at your option) any later version.
+ *
+ * The RemoteREngine project is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with the RemoteREngine project. If not, see <http://www.gnu.org/licenses/>.
+ * @author $Author: ian_long $
+ * @version $Rev: 129 $ as of $Date: 2009-09-15 12:18:19 +0200 (Tue, 15 Sep 2009) $
+ * <p>URL : $HeadURL: svn+ssh://romain@svn.r-forge.r-project.org/svnroot/remoterengine/pkg/RemoteREngine/inst/java_src/test/org/rosuda/REngine/remote/client/TestFactors.java $
+ */
+public class TestFactors extends RemoteREngineTestBase {
+
+	@Test
+	public void testFactors() throws Exception {
+		System.out.println("* Test support of factors");
+		REXP f = r.parseAndEval("factor(paste('F',as.integer(runif(20)*5),sep=''))");
+		System.out.println("  f="+f);
+		System.out.println("  isFactor: "+f.isFactor()+", asFactor: "+f.asFactor());
+		Assert.assertNotNull( f.isFactor(), "Returned a null factor");
+		assert( f.isFactor()) : "Failed to return a factor";
+
+/*		System.out.println("  singe-level factor used to degenerate:");
+		f = r.parseAndEval("factor('foo')");
+		System.out.println("  isFactor: "+f.isFactor()+", asFactor: "+f.asFactor());
+		if (!f.isFactor() || f.asFactor() == null) throw new TestException("single factor test failed (not a factor)");
+		if (!f.asFactor().at(0).equals("foo")) throw new TestException("single factor test failed (wrong value)");
+		System.out.println("  test factors with null elements contents:");
+		r.assign("f", new REXPFactor(new RFactor(new String[] { "foo", "bar", "foo", "foo", null, "bar" })));
+		f = r.parseAndEval("f");
+		if (!f.isFactor() || f.asFactor() == null) throw new TestException("factor assign-eval test failed (not a factor)");
+		System.out.println("  f = "+f.asFactor());
+		f = r.parseAndEval("as.factor(c(1,'a','b',1,'b'))");
+		System.out.println("  f = "+f);
+		if (!f.isFactor() || f.asFactor() == null) throw new TestException("factor test failed (not a factor)");
+		System.out.println("PASSED");
+*/
+	}
+}

Added: pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/common/RemoteREngineTestBase.java
===================================================================
--- pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/common/RemoteREngineTestBase.java	                        (rev 0)
+++ pkg/RemoteREngine.test/inst/java_src/src/test/org/rosuda/REngine/remote/common/RemoteREngineTestBase.java	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,74 @@
+package org.rosuda.REngine.remote.common;
+
+import java.util.Enumeration;
+import java.util.Properties;
+
+import org.rosuda.REngine.remote.client.RemoteREngine;
+import org.testng.annotations.BeforeSuite;
+
+/*
+ * Copyright Stoat Software & Services 2009 <ilong at stoatsoftware.com>
+ *
+ * This file is part of the RemoteREngine project
+ *
+ * The RemoteREngine project is free software: 
+ * you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 2 of the License, or
+ * (at your option) any later version.
+ *
+ * The RemoteREngine project is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with the RemoteREngine project. If not, see <http://www.gnu.org/licenses/>.
+ * @author $Author: ian_long $
+ * @version $Rev: 129 $ as of $Date: 2009-09-15 12:18:19 +0200 (Tue, 15 Sep 2009) $
+ * <p>URL : $HeadURL: svn+ssh://romain@svn.r-forge.r-project.org/svnroot/remoterengine/pkg/RemoteREngine/inst/java_src/test/org/rosuda/REngine/remote/common/RemoteREngineTestBase.java $
+ */
+public class RemoteREngineTestBase {
+	/** Instance of the Remote R Engine available for tests */
+	protected static RemoteREngine r = init();
+
+	/**
+	 * Create a connection to a running remote server
+	 * @return Reference to a remote engine
+	 */
+	@BeforeSuite
+	protected static RemoteREngine init(){
+/*		Properties props = System.getProperties();
+		for (Enumeration<?> enumerator = props.keys(); enumerator.hasMoreElements(); ) {
+			String key = (String)enumerator.nextElement();
+			String value = props.getProperty(key);
+			System.out.println(key + " : " + value);
+		}
+*/
+		RemoteREngine r = null ;
+		String name = "RemoteREngineTest";
+		int registryPort = RemoteREngineConstants.RMIPORT;
+		try{
+			if (System.getSecurityManager() == null) {
+				System.setSecurityManager(new SecurityManager());
+			}
+			r = new RemoteREngine( name , RemoteREngineConstants.RMIHOSTNAME , registryPort );
+			System.out.println("Connected to " + name + " via " + RemoteREngineConstants.RMIHOSTNAME + 
+					" registry on port " + registryPort);
+		} catch( Exception e ){
+			System.err.println( "cannot connect to R engine" ) ;
+			System.exit(1); 
+		}
+		return r; 
+	}
+	
+	protected static RemoteREngine cleanR(){
+		try{
+			r.parseAndEval( "rm( list = ls() )" ) ;
+		} catch(Exception e){
+			// should not happen
+		}
+		return r; 
+	}
+
+}

Added: pkg/RemoteREngine.test/inst/java_src/testng.xml
===================================================================
--- pkg/RemoteREngine.test/inst/java_src/testng.xml	                        (rev 0)
+++ pkg/RemoteREngine.test/inst/java_src/testng.xml	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,8 @@
+<!DOCTYPE suite SYSTEM "http://testng.org/testng-1.0.dtd" >
+<suite name="RemoteREngine Test Suite" verbose="2">
+  <test name="Start Up Test">
+    <classes>
+      <class name="org.rosuda.REngine.remote.client.TestFactors"/>
+    </classes>
+  </test>
+</suite>

Added: pkg/RemoteREngine.test/man/RemoteREngine.test-package.Rd
===================================================================
--- pkg/RemoteREngine.test/man/RemoteREngine.test-package.Rd	                        (rev 0)
+++ pkg/RemoteREngine.test/man/RemoteREngine.test-package.Rd	2009-09-17 07:39:07 UTC (rev 134)
@@ -0,0 +1,26 @@
+\name{RemoteREngine.test-package}
+\alias{RemoteREngine.test-package}
+\alias{RemoteREngine.test}
+\docType{package}
+\title{
+Test suite for RemoteREngine
+}
+\description{
+This package contains unit test suite for the RemoteREngine package
+}
+\details{
+\tabular{ll}{
+Package: \tab RemoteREngine.test\cr
+Type: \tab Package\cr
+Version: \tab 0.0-0\cr
+Date: \tab 2009-09-16\cr
+License: \tab GPL (>= 3.0)\cr
+LazyLoad: \tab yes\cr
+}
+}
+\author{
+Romain Francois <francoisromain at free.fr>
+
+Maintainer: Romain Francois <francoisromain at free.fr>
+}
+\keyword{ package }



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