[Rcppoctave-user] Apple Blues

[Dominick Samperi]

By default R package builds will use the C/C++ compiler that was used
to build R, but llvm-g++-4.2 does not work under Mavericks. Try
creating .R/Makevars containing
CXX=g++
CC=gcc
or
CXX=clang++
CC=clang



On Mon, Nov 4, 2013 at 10:18 AM, Giuseppe <neox86 at gmail.com> wrote:

> I have been reading the thread about woes with osx and RcppOctave.
>
> If I am correct, it seems that the issue is declared closed if
> "--no-test-load" is added to "R CMD INSTALL". Unfortunately, this does not
> work for me. This is what I get :
>
> [omitted]
>
> llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names
> -undefined dynamic_lookup -single_module -multiply_defined suppress
> -L/usr/local/lib -L/usr/local/lib -o RcppOctave.so conversion.o
> rcpp_octave.o /Users/osxuser/Library/R/Rcpp/lib/libRcpp.a
> -L/usr/local/Cellar/octave/3.6.4/lib/octave/3.6.4
> -L/usr/local/Cellar/octave/3.6.4/lib -loctinterp -loctave -lcruft
> -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework
> -Wl,CoreFoundation
>
> installing to /Users/osxuser/Library/R/RcppOctave/libs
>
>
> R(24620) malloc: *** error for object 0x7fff71042570: pointer being freed
> was not allocated
> *** set a breakpoint in malloc_error_break to debug
> /Library/Frameworks/R.framework/Resources/bin/INSTALL: line 34: 24619 Done
>                    echo 'tools:::.install_packages()'
>      24620 Abort trap: 6           | R_DEFAULT_PACKAGES= LC_COLLATE=C
> "${R_HOME}/bin/R" $myArgs --slave --args ${args}
>
>
>
> However, i think the Makevars does not picks up the correct location of
> the R library. I saw in the list that a patch was sent. Can I have it too
> to test and see weather this is my case?
>
> ----
>
> This is my setup:
>
> [~/scratch]$ gfortran --version
> GNU Fortran (GCC) 4.8.2
>
> [~/scratch]$ octave --version
> GNU Octave, version 3.6.4
>
> [~/scratch]$ R --version
> R version 3.0.2 (2013-09-25) -- "Frisbee Sailing"
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>
>
> Octave and gfortran are from homebrew. Osx version is Maverick. Xcode
> tools 5.0.1.
>
> [ ~/scratch]$ clang --version
> Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
>
> [ ~/scratch]$ g++ --version
> Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr
> --with-gxx-include-dir=/usr/include/c++/4.2.1
> Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
>
>
>
>
>
>
>
>
>
>
>
>
> _______________________________________________
> Rcppoctave-user mailing list
> Rcppoctave-user at lists.r-forge.r-project.org
> http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcppoctave-user
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/rcppoctave-user/attachments/20131104/df63aefd/attachment.html>