[Rcpp-devel] Rcpp::sourceCpp Problem with R 4.3 update

Dominick Samperi djsamperi at gmail.com
Tue May 30 21:25:02 CEST 2023


Thanks for the feedback. I don't remember making such mods, and I am using
the latest Rcpp, but to be safe I reinstalled Rtools43 and R 4.3.0 and the
problem is resolved! Sorry about the false alarm.

Actually, I had two different installations of Rcpp, one under Program
Files\R\R-4.3.0, and
one under the directory pointed to by R_LIBS_USER (c:\w\R\4.3). I think R
now uses some
directory under \Users\name\AppData for user packages by default. There may
have been
a small change with 4.3 in the way
R_LIBS and R_LIBS_USER are handled, in that the latter must be used to get
local packages
NOT to be installed under \Users\name\AppData.

Dominick


On Tue, May 30, 2023 at 3:03 PM Kevin Ushey <kevinushey at gmail.com> wrote:

> I'm also not able to reproduce, but I see a different linker invocation:
>
> g++ -shared -static-libgcc -o sourceCpp_3.dll tmp.def file43185fe94049.o
> -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64
> -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LC:/R/R-43~1.0/bin/x64
> -lR
>
> In particular, yours is passing both '-std=gnu++17' and '-s'. Have you
> modified your R Makevars file, or R installation's etc/Makeconf?
>
> On Tue, May 30, 2023 at 11:43 AM Alexander Ilich <ailich at usf.edu> wrote:
>
>> What version of Rcpp are you using? With R 4.3 and Rcpp 1.0.10 I have no
>> issues.
>>
>> library(Rcpp)
>>
>>
>> Rcpp::sourceCpp(code='
>>   #include <Rcpp.h>
>>   using namespace Rcpp;
>>   // [[Rcpp::export()]]
>>   SEXP cpptest(NumericVector v) {
>>     return v;
>>   }'
>> )
>> cpptest(1:5)
>> #> [1] 1 2 3 4 5
>>
>>
>> R.version
>> #>                _
>> #> platform       x86_64-w64-mingw32
>> #> arch           x86_64
>> #> os             mingw32
>> #> crt            ucrt
>> #> system         x86_64, mingw32
>> #> status
>> #> major          4
>> #> minor          3.0
>> #> year           2023
>> #> month          04
>> #> day            21
>> #> svn rev        84292
>> #> language       R
>> #> version.string R version 4.3.0 (2023-04-21 ucrt)
>> #> nickname       Already Tomorrow
>> packageVersion("Rcpp")
>> #> [1] '1.0.10'
>> ------------------------------
>> *From:* Rcpp-devel <rcpp-devel-bounces at lists.r-forge.r-project.org> on
>> behalf of Dominick Samperi <djsamperi at gmail.com>
>> *Sent:* Tuesday, May 30, 2023 2:27 PM
>> *To:* rcpp-devel <Rcpp-devel at r-forge.wu-wien.ac.at>
>> *Subject:* [Rcpp-devel] Rcpp::sourceCpp Problem with R 4.3 update
>>
>> Looks like the recent update to R 4.3 broke Rcpp::sourceCpp.
>>
>> Here is a simple example...
>>
>> library(Rcpp)
>> Rcpp::sourceCpp(code='
>>   #include <Rcpp.h>
>>   using namespace Rcpp;
>>   // [[Rcpp::export()]]
>>   SEXP cpptest(NumericVector v) {
>>     return v;
>>   }'
>> )
>> cpptest(1:5)
>>
>> This works without problems under R 4.2.3, but under R 4.3 I get...
>>
>> using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
>> C:\rtools43\x86_64-w64-mingw32.static.posix\bin/ld.exe: internal error:
>> aborting at ../../binutils-2.40/ld/ldlang.c:527 in compare_section
>> C:\rtools43\x86_64-w64-mingw32.static.posix\bin/ld.exe: please report
>> this bug
>> collect2.exe: error: ld returned 1 exit status
>> g++ -std=gnu++17  -I"c:/PROGRA~1/R/R-43~1.0/include" -DNDEBUG
>> -I"C:/PROGRA~1/R/R-43~1.0/library/Rcpp/include"
>> -I"C:/Users/djsam/AppData/Local/Temp/RtmpKEsaiY/sourceCpp-x86_64-w64-mingw32-1.0.10"
>>   -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall
>>  -mfpmath=sse -msse2 -mstackrealign  -c filebb0108a7dbf.cpp -o
>> filebb0108a7dbf.o
>> g++ -std=gnu++17 -shared -s -static-libgcc -o sourceCpp_2.dll tmp.def
>> filebb0108a7dbf.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64
>> -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib
>> -Lc:/PROGRA~1/R/R-43~1.0/bin/x64 -lR
>> Error in Rcpp::sourceCpp(code = "\n  #include <Rcpp.h>\n  using namespace
>> Rcpp;\n  // [[Rcpp::export()]]\n  SEXP cpptest(NumericVector v) {\n
>>  return v;\n  }") :
>>   Error occurred building shared library.
>>
>> Thanks,
>> Dominick
>>
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