[Rcpp-devel] Using complex numbers in a C program called by R
Dirk Eddelbuettel
edd at debian.org
Sun Jan 3 22:14:13 CET 2016
On 4 January 2016 at 09:50, Baptiste Auguie wrote:
| Hi,
|
| Just to clarify: did you include files from RcppFaddeeva because you need some
| of its functionality (special complex error functions), or was it only a
| workaround to get access to complex numbers? In the latter case, I recommend
| you try making a minimal Rcpp package to see how easy it is to interface with
| C++ functions, and that way you will only have relevant header files included.
+1
I already responded to Pierre's initial emails in November and tried then to
explain to him that that .C() is a _really bad idea at this point in time.
It is two months later and nothing has changed.
So here is a quick illustration of what Baptiste meant. All it takes is
library(Rcpp) # no other depends
and then (and I even got this right on first try):
R> cppFunction("Rcomplex addTwo(Rcomplex x, Rcomplex y) {return x + y; }")
R> addTwo(2+2i, 3+3i)
[1] 5+5i
R>
With one invocation of cppFunction() I created an ad-hoc compiled function
(technically compiled as C++ but you can call this C as well) which adds two
complex number -- one of Pierre's request as per the email below. And low
and behold is just does that.
So yes -- maybe time to learn some Rcpp, maybe forget about .C() and simply
get on with this and other other things.
Dirk
|
| Best,
|
| baptiste
|
|
|
| On 4 January 2016 at 09:36, Pierre Lafaye de Micheaux <lafaye at dms.umontreal.ca>
| wrote:
|
| Dear all,
|
| This email comes after a discussion on the R-pkg-devel mailing list:
| https://stat.ethz.ch/pipermail/r-package-devel/2016q1/000627.html
|
| My purpose was to be able, in two of my packages, to use complex numbers
| (create some, addition, multiplication, division, modulus, etc)
| directly in a C code that is called from R (using the .C interface).
| Note that these complex numbers might not come from R but could be created
| and used directly in my C code, that will then output (via pointers)
| real (I mean double) values back to R (via the .C interface). I could also
| send from R these complex numbers via the .C interface.
|
| A very simple example of such a function called from R via the .C interface
| could be the following:
|
| #include <R.h>
| #include "Rmath.h"
| extern "C" {
| void Cfunc(complex double *var) {
| double _Complex z = 1.0 + 2.0 * _Complex_I;
| var[0] = z + exp(var[0]);
| return;
| }}
|
| I could call this function from R as follows:
| .C(1i)
|
| No problem so far when I use such a function in a package that is compiled
| under Linux. But this will not work under windows (see the discussion
| on the R-pkg-devel list). So what I did to make everything work under
| Windows also was to include in the src/ directory of my package the source
| files
| from the RcppFaddeeva package. Then I would modify the function above as
| follows:
|
| #include <R.h>
| #include "Rmath.h"
| #include "libraries/callFaddeeva.cpp"
| #include "libraries/Faddeeva.cpp"
| #include "libraries/RcppExports.cpp"
| extern "C" {
| void Cfunc(complex double *var) {
| cmplx z = C(1.0, 2.0);
| var[0] = z + cexp(var[0]);
| return;
| }}
|
| Maybe there is a way not to include all the Faddeeva source files in my
| packages? But I do not know how to do it.
|
| Best regards,
|
| Pierre L.
|
|
|
| --
| Pierre Lafaye de Micheaux
|
| Adresse courrier:
| Université de Montréal
| Pavillon André-Aisenstadt
| Département de Mathématiques et Statistique
| CP 6128 Succursale Centre-ville
| Montréal Qc H3C 3J7
| CANADA
|
| Adresse physique:
| Département de Mathématiques et Statistique
| Bureau 4249, Pavillon André-Aisenstadt
| 2920, chemin de la Tour
| Montréal, Québec H3T 1J4
| CANADA
|
| Tél.: (00-1) 514-343-6607 / Fax: (00-1) 514-343-5700
| lafaye at dms.umontreal.ca
| http://www.biostatisticien.eu
|
| _______________________________________________
| Rcpp-devel mailing list
| Rcpp-devel at lists.r-forge.r-project.org
| https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
|
|
| _______________________________________________
| Rcpp-devel mailing list
| Rcpp-devel at lists.r-forge.r-project.org
| https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
--
http://dirk.eddelbuettel.com | @eddelbuettel | edd at debian.org
More information about the Rcpp-devel
mailing list