[Rcpp-devel] Not able to convert from Rcpp::NumericVector to Teuchos::ArrayRCP<size_t>
Romain François
romain at r-enthusiasts.com
Fri May 23 01:18:29 CEST 2014
Hello,
From what I understand of ArrayRCP, having read the documentation for a few minutes. (http://trilinos.sandia.gov/packages/docs/r9.0/packages/teuchos/doc/html/classTeuchos_1_1ArrayRCP.html)
This looks like a vector and therefore it is likely that the default Exporter<T> will not be useful as it tries to use the constructor taking a SEXP :
template <typename T>
class Exporter{
public:
Exporter( SEXP x ) : t(x){}
inline T get(){ return t ; }
private:
T t ;
} ;
you can use a RangeExporter instead which looks more compatible to what ArrayRCP looks like:
template <typename T> class RangeExporter {
public:
typedef typename T::value_type r_export_type ;
RangeExporter( SEXP x ) : object(x){}
~RangeExporter(){}
T get(){
T vec( ::Rf_length(object) );
::Rcpp::internal::export_range( object, vec.begin() ) ;
return vec ;
}
private:
SEXP object ;
} ;
You can probably do this by having something like this early enough (after RcppCommon.h but before Rcpp.h).
namespace Rcpp {
namespace traits {
template <typename T> class Exporter< Teuchos::ArrayRCP<T> > : public RangeExporter< Teuchos::ArrayRCP<T> >{
public:
Exporter( SEXP x) : RangeExporter< Teuchos::ArrayRCP<T> >(x){}
}
}
}
Romain
Le 23 mai 2014 à 00:42, Chaomei Lo <chaomeilo at gmail.com> a écrit :
> Sorry to confuse you, Dirk, I had my previous message title wrong. Here below was the message with the correct title and content.
>
> ////////////////////////////////
> I have created R packages using Makevars and it works pretty good for me. I am able to convert from a Rcpp::NumericVector to std::vector as in below.
>
> NumericVector col_cts = buildMatrix(Xr);
>
> vector<long unsigned int> col_counts = Rcpp::as<vector<long unsigned int>>(col_cts);
>
> Now I am having a problem with an application involves the Trilinos library. Here below I am trying to convert a Rcpp::NumericVector to Teuchos::ArrayRCP<size_t> in the following line, it gave me errors as shown below in red. Would you please help me with this ?
>
> Teuchos::ArrayRCP<size_t> col_counts=Rcpp::as<Teuchos::ArrayRCP<size_t>>(col_cts);
>
> Thanks a lot.
>
> In file included from /share/apps/R/3.0.2/lib64/R/library/Rcpp/include/Rcpp/as.h:25:0,
> from /share/apps/R/3.0.2/lib64/R/library/Rcpp/include/RcppCommon.h:169,
> from /share/apps/R/3.0.2/lib64/R/library/Rcpp/include/Rcpp.h:27,
> from buildMatrix.cpp:4:
> /share/apps/R/3.0.2/lib64/R/library/Rcpp/include/Rcpp/internal/Exporter.h: In constructor 'Rcpp::traits::Exporter<T>::Exporter(SEXP) [with T = Teuchos::Array
> RCP<long unsigned int>, SEXP = SEXPREC*]':
> /share/apps/R/3.0.2/lib64/R/library/Rcpp/include/Rcpp/as.h:79:51: instantiated from 'T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T =
> Teuchos::ArrayRCP<long unsigned int>, SEXP = SEXPREC*]'
> /share/apps/R/3.0.2/lib64/R/library/Rcpp/include/Rcpp/as.h:144:84: instantiated from 'T Rcpp::as(SEXP) [with T = Teuchos::ArrayRCP<long unsigned int>, SEXP
> = SEXPREC*]'
> buildMatrix.cpp:84:87: instantiated from here
> /share/apps/R/3.0.2/lib64/R/library/Rcpp/include/Rcpp/internal/Exporter.h:31:31: error: invalid conversion from 'SEXP' to 'long int' [-fpermissive]
> /people/d3j508/trilinos-11.6.1/trilinos-11.6.1_Install/include/Teuchos_ArrayRCP.hpp:129:1: error: initializing argument 1 of 'Teuchos::ArrayRCP<T>::ArrayRC
> P(Teuchos::ArrayRCP<T>::size_type, const T&) [with T = long unsigned int, Teuchos::ArrayRCP<T>::size_type = long int]' [-fpermissive]
> make: *** [buildMatrix.o] Error 1
> ERROR: compilation failed for package 'Tpkg'
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