[Rcpp-devel] sourceCpp issue: code vs. file
Kevin Ushey
kevinushey at gmail.com
Thu May 23 02:13:43 CEST 2013
Hi Rodney,
I have the same problem as you on Mac OSX.
I'm able to successfully compile the file through sourceCpp if I use a file
extension of .cpp rather than .cxx. Could this somehow be the reason why?
Let me know if that works for you.
-Kevin
On Wed, May 22, 2013 at 4:27 PM, Sparapani, Rodney <rsparapa at mcw.edu> wrote:
> And here is the failure on OS X ML...
>
> > sourceCpp(verbose=TRUE, rebuild=TRUE, file="~/arma-sp.cxx")
>
> Generated extern "C" functions
> --------------------------------------------------------
>
>
> #include <Rcpp.h>
>
> RcppExport SEXP sourceCpp_41979_convertSparse(SEXP matSEXP) {
> BEGIN_RCPP
> Rcpp::RNGScope __rngScope;
> S4 mat = Rcpp::as<S4 >(matSEXP);
> convertSparse(mat);
> return R_NilValue;
> END_RCPP
> }
>
> Generated R functions
> -------------------------------------------------------
>
> `.sourceCpp_41979_DLLInfo` <-
> dyn.load('/var/folders/nb/62qyw7056rj7lwfqbqgmh6lw0000gn/T//RtmpZ7Msbu/sourcecpp_1ade06077c/sourceCpp_88708.so')
>
> convertSparse <- Rcpp:::sourceCppFunction(function(mat) {},
> `.sourceCpp_41979_DLLInfo`, 'sourceCpp_41979_convertSparse')
>
> rm(`.sourceCpp_41979_DLLInfo`)
>
> Building shared library
> --------------------------------------------------------
>
> DIR:
> /var/folders/nb/62qyw7056rj7lwfqbqgmh6lw0000gn/T//RtmpZ7Msbu/sourcecpp_1ade06077c
>
> /Library/Frameworks/R.framework/Resources/bin/R CMD SHLIB -o
> 'sourceCpp_88708.so' --preclean 'arma-sp.cxx'
> Error in
> dyn.load("/var/folders/nb/62qyw7056rj7lwfqbqgmh6lw0000gn/T//RtmpZ7Msbu/sourcecpp_1ade06077c/sourceCpp_88708.so")
> (from arma-sp.cxx.R#1) :
> unable to load shared object
> '/var/folders/nb/62qyw7056rj7lwfqbqgmh6lw0000gn/T//RtmpZ7Msbu/sourcecpp_1ade06077c/sourceCpp_88708.so':
>
> dlopen(/var/folders/nb/62qyw7056rj7lwfqbqgmh6lw0000gn/T//RtmpZ7Msbu/sourcecpp_1ade06077c/sourceCpp_88708.so,
> 6): image not found
> > sessionInfo()
> R version 2.15.2 (2012-10-26)
> Platform: i386-apple-darwin9.8.0/i386 (32-bit)
>
> locale:
> [1] C
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> other attached packages:
> [1] RcppArmadillo_0.3.6.1 Rcpp_0.10.2 Matrix_1.0-10
> lattice_0.20-13
>
> loaded via a namespace (and not attached):
> [1] compiler_2.15.2 grid_2.15.2 tools_2.15.2
>
> Thanks for any hints.
>
> Rodney
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>
--
-Kevin
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