[Rcpp-devel] rcpp + bigmemory

Aileen Lin aileenshanhong.lin at gmail.com
Tue Apr 2 08:32:03 CEST 2013


Hi there,

I tried to build a package where I used rcpp and bigmemory.

My .cpp file starts with:
// [[Rcpp::depends(bigmemory)]]
#include <Rcpp.h>
#include <bigmemory/MatrixAccessor.hpp>
using namespace Rcpp;

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
However, there is an error message:



devtools::document()Updating cafs documentationLoading
cafsRe-compiling cafs"C:/PROGRA~1/R/R-215~1.3/bin/i386/R" --vanilla
CMD INSTALL  \
  "C:\Documents and Settings\F051133\Desktop\cafs"  \
  --library="C:\DOCUME~1\F051133\LOCALS~1\Temp\RtmpsBikUM" --no-R  \
  --no-data --no-help --no-demo --no-inst --no-docs --no-multiarch  \
  --no-test-load --preclean * installing *source* package 'cafs' ...
** libs
g++ -m32 -I"C:/PROGRA~1/R/R-215~1.3/include" -DNDEBUG
-I"H:/R/win-library/2.15/Rcpp/include"
-I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall
-mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m32 -I"C:/PROGRA~1/R/R-215~1.3/include" -DNDEBUG
-I"H:/R/win-library/2.15/Rcpp/include"
-I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall
-mtune=core2 -c rcpp_hello_world.cpp -o rcpp_hello_world.o
g++ -m32 -I"C:/PROGRA~1/R/R-215~1.3/include" -DNDEBUG
-I"H:/R/win-library/2.15/Rcpp/include"
-I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall
-mtune=core2 -c sbi.cpp -o sbi.o
sbi.cpp:3:40: fatal error: bigmemory/MatrixAccessor.hpp: No such file
or directory
compilation terminated.
make: *** [sbi.o] Error 1
ERROR: compilation failed for package 'cafs'
* removing 'C:/DOCUME~1/F051133/LOCALS~1/Temp/RtmpsBikUM/cafs'Error:
Command failed (1)


Does anyone know how to fix it? Thank you.

Regards,
Aileen L.

View my Linkedin profile: http://au.linkedin.com/in/aileen2

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