[Rcpp-devel] 'Nested' Rcpp functions using inline
Rubem Kaipper Ceratti
rubem_ceratti at yahoo.com.br
Wed Oct 10 16:39:53 CEST 2012
Hi,
I'm currently using Rcpp and inline to speed up some R code I wrote, but being a C++/Rcpp newbie I'm running into some difficulties. More specifically, I'm having problems calling an Rcpp function inside another one. As a toy example consider the code:
##
library(Rcpp)
library(inline)
code2.0 <-'
NumericVector u = as<NumericVector>(u_r);
double mu = as<double>(mu_r),
v = log(mu);
int n = u.size(),
res = 0;
for(int i=0; i<n; i++){
res += (exp(u(i))-v) > 0 ? 1 : 0;
}
return wrap(res);
'
sig2 <- signature(u_r = 'numeric', mu_r = 'numeric')
fun.test <- cxxfunction(sig2, code2.0, plugin = "Rcpp")
fun.test(1:4, 100)
sum(exp(1:4) > log(100)) # ok!
##
It works just fine. Now, I'd like to break it down into two functions like so:
##
code1 <-'
double x = as<double>(x_r),
y = as<double>(y_r),
ans;
ans = (exp(x)-y) > 0 ? 1 : 0;
return wrap(ans);
'
code2.1 <-'
NumericVector u = as<NumericVector>(u_r);
double mu = as<double>(mu_r),
v = log(mu);
int n = u.size(),
res = 0;
for(int i=0; i<n; i++){
res += as<int>(fun1(u(i),v));
}
return wrap(res);
'
sig1 <- signature(x_r = 'numeric', y_r = 'numeric')
sig2 <- signature(u_r = 'numeric', mu_r = 'numeric')
fun.test <- cxxfunction(list(fun1 = sig1, fun2 = sig2),
list(code1, code2.1), plugin = "Rcpp")
##
But I get the error message:
# file5686a0c71e8.cpp: In function 'SEXPREC* fun2(SEXP, SEXP)':
# file5686a0c71e8.cpp:52:33: error: invalid cast from type 'double' to type 'SEXP'
# file5686a0c71e8.cpp:55:20: error: invalid cast from type 'Rcpp::traits::storage_type<14>::type {aka double}' to type 'SEXP'
I then tried to change the types of 'u(i)' and 'v' to SEXP, but I get the same error:
##
code2.2 <-'
NumericVector u = as<NumericVector>(u_r);
double mu = as<double>(mu_r),
v = log(mu);
int n = u.size(),
res = 0;
SEXP us, vs = (SEXP) v;
for(int i=0; i<n; i++){
us = (SEXP) u(i);
res += as<int>(fun1(us,vs));
}
return wrap(res);
'
fun.test <- cxxfunction(list(fun1 = sig1, fun2 = sig2),
list(code1, code2.2), plugin = "Rcpp")
##
# file5686a0c71e8.cpp: In function 'SEXPREC* fun2(SEXP, SEXP)':
# file5686a0c71e8.cpp:52:33: error: invalid cast from type 'double' to type 'SEXP'
# file5686a0c71e8.cpp:55:20: error: invalid cast from type 'Rcpp::traits::storage_type<14>::type {aka double}' to type 'SEXP'
Is there any way to make it work?
Thanks,
Rubem
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