[Rcpp-devel] Request for help with compiling Rcpp example
Jian Kang
allenhahaha at gmail.com
Thu Oct 13 18:15:22 CEST 2011
Thanks for your reply.
Here is the response of 'Hello World' program:
> src='#include <iostream>
+ using namespace std;
+ void main()
+ {
+ cout << "Hello World!" << endl;
+ cout << "Welcome to C++ Programming" << endl;
+ }'
>
> fx <- cxxfunction(src,plugin = "Rcpp",verbose=T)
>> setting environment variables:
PKG_LIBS = C:/R/Rsoft/library/Rcpp/lib/i386/libRcpp.a
>> LinkingTo : Rcpp
CLINK_CPPFLAGS = -I"C:/R/Rsoft/library/Rcpp/include"
>> Program source :
1 :
2 : // includes from the plugin
3 :
4 : #include <Rcpp.h>
5 :
6 :
7 : #ifndef BEGIN_RCPP
8 : #define BEGIN_RCPP
9 : #endif
10 :
11 : #ifndef END_RCPP
12 : #define END_RCPP
13 : #endif
14 :
15 : using namespace Rcpp;
16 :
17 :
18 : // user includes
19 :
20 :
21 : // declarations
22 : extern "C" {
23 : SEXP file3a1c304e( ) ;
24 : }
25 :
26 : // definition
27 :
28 : SEXP file3a1c304e( ){
29 : BEGIN_RCPP
30 :
31 : END_RCPP
32 : }
33 :
34 :
Compilation argument:
C:/R/Rsoft/bin/i386/R CMD SHLIB file3a1c304e.cpp 2>
file3a1c304e.cpp.err.txt
g++ -I"C:/R/Rsoft/include" -I"C:/R/Rsoft/library/Rcpp/include" -O2
-Wall -c file3a1c304e.cpp -o file3a1c304e.o
g++ -shared -s -static-libgcc -o file3a1c304e.dll tmp.def file3a1c304e.o
C:/R/Rsoft/library/Rcpp/lib/i386/libRcpp.a -LC:/R/Rsoft/bin/i386 -lR
cygwin warning:
MS-DOS style path detected: C:/R/Rsoft/etc/i386/Makeconf
Preferred POSIX equivalent is: /cygdrive/c/R/Rsoft/etc/i386/Makeconf
CYGWIN environment variable option "nodosfilewarning" turns off this
warning.
Consult the user's guide for more details about POSIX paths:
http://cygwin.com/cygwin-ug-net/using.html#using-pathnames
Error in as.function.default(c(value, if (is.null(bd) || is.list(bd))
list(bd) else bd), :
invalid formal argument list for "function"
Here, I also tried the test by Hadley,
_devel()
cygwin warning:
MS-DOS style path detected: C:/R/Rsoft/etc/i386/Makeconf
Preferred POSIX equivalent is: /cygdrive/c/R/Rsoft/etc/i386/Makeconf
CYGWIN environment variable option "nodosfilewarning" turns off this
warning.
Consult the user's guide for more details about POSIX paths:
http://cygwin.com/cygwin-ug-net/using.html#using-pathnames
gcc -I"C:/R/Rsoft/include" -I"C:/R/Rsoft/library/Rcpp/include" -O3
-Wall -std=gnu99 -c foo.c -o foo.o
gcc -shared -s -static-libgcc -o foo.dll tmp.def foo.o
C:/R/Rsoft/library/Rcpp/lib/i386/libRcpp.a -LC:/R/Rsoft/bin/i386 -lR
[1] TRUE
Sorry that I don't really get it how to rebuild R packages from source.
Thanks,
Kent
On Thu, Oct 13, 2011 at 5:11 PM, Hadley Wickham <hadley at rice.edu> wrote:
> > My best guess is that you have not installed the Rtools correctly. Can
> you
> > compile a simple 'hello, world' example in C or C++? Can you rebuild R
> > packages from source?
>
> I wrote an function to check that you have a valid R development
> environment (with help from Simon Urbanek) for devtools. See code
> below - and check with has_devel()
>
> Hadley
>
>
> has_devel <- function() {
> foo_path <- file.path(tempdir(), "foo.c")
>
> cat("void foo(int *bar) { *bar=1; }\n", file = foo_path)
> on.exit(unlink(foo_path))
>
> R("CMD SHLIB foo.c", tempdir())
> dylib <- file.path(tempdir(), paste("foo", .Platform$dynlib.ext, sep=''))
> on.exit(unlink(dylib), add = TRUE)
>
> dyn.load(dylib)
> on.exit(dyn.unload(dylib), add = TRUE)
>
> stopifnot(do.call(".C", list("foo",0L))[[1]] == 1L)
> TRUE
> }
>
> R <- function(options, path = tempdir()) {
> r_path <- shQuote(file.path(R.home("bin"), "R"))
> in_dir(path, system_check(paste(r_path, options)))
> }
>
> system_check <- function(cmd) {
> res <- system(cmd)
> if (res != 0) {
> stop("Command failed (", res, ")", call. = FALSE)
> }
> invisible(TRUE)
> }
>
> in_dir <- function(dir, code) {
> cur <- getwd()
> setwd(dir)
> on.exit(setwd(cur))
>
> force(code)
> }
>
> --
> Assistant Professor / Dobelman Family Junior Chair
> Department of Statistics / Rice University
> http://had.co.nz/
> _______________________________________________
> Rcpp-devel mailing list
> Rcpp-devel at lists.r-forge.r-project.org
> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
>
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