[Rcpp-devel] g++ version and Rcpp-based package installation.
Dirk Eddelbuettel
edd at debian.org
Wed Jul 20 12:18:24 CEST 2011
On 20 July 2011 at 08:43, Cedric Ginestet wrote:
| Hi again,
|
| Could this be due to the fact that the versions of R and C++ on the server
| where I wish to install the R package are slightly outdated? On the target
| server, they are as follows:
| R 2.12.0
| g++ 4.1.2
Yes, g++ 4.1.* is a no go.
You must have 4.2.$something with $something larger than 0 (and this mattered
once before on OS X).
Dirk
| whereas on the machine where a successful installation of the same package is
| running, I have
| R 2.12.2
| g++ 4.5.2
|
| Thank you very much,
| Cedric
|
| On 19/07/11 16:21, Cedric Ginestet wrote:
|
| Hi Rcpp Experts,
|
| I have tried to install an Rcpp-based package onto a Linux server. While
| the package compiles and install fine on my machine, I don't seem to be
| able to install it on that server:
|
|
| After R CMD INSTALL package
|
| ########################
| g++ -I/share/apps/R_2.12.0/lib64/R/include -I/usr/local/include -I"/home/
| cginestetbrc/R/x86_64-unknown-linux-gnu-library/2.12//Rcpp/include"
| -fpic -g -O2 -c common.cpp -o common.o
| /home/cginestetbrc/R/x86_64-unknown-linux-gnu-library/2.12//Rcpp/include/
| Rcpp/vector/Vector.h: In member function 'void Rcpp::Vector
| <RTYPE>::assign_object(const T&, Rcpp::traits::true_type) [with T =
| Rcpp::sugar::Vectorized<floor, true, Rcpp::Vector<14> >, int RTYPE = 13]':
| /home/cginestetbrc/R/x86_64-unknown-linux-gnu-library/2.12//Rcpp/include/
| Rcpp/vector/Vector.h:68: instantiated from 'Rcpp::Vector<RTYPE>&
| Rcpp::Vector<RTYPE>::operator=(const T&) [with T = Rcpp::sugar::Vectorized
| <floor, true, Rcpp::Vector<14> >, int RTYPE = 13]'
| common.cpp:14: instantiated from here
| #########################
|
| where the function in common.cpp is as follows (line 14 is the line where
| the floor function is used):
| #########################
| IntegerVector disUnif(int n, int a, int b){
| IntegerVector vec(n);
| vec = floor(runif(n,a,b+1));
| return vec;
| }//disUnif
| #########################
|
| Any ideas on what I am missing?
|
| Thanks for your help,
| Cedric
|
| --
| Cedric Ginestet, PhD
| Centre for Neuroimaging Sciences (L3.04)
| NIHR Biomedical Research Centre
| Department of Neuroimaging
| Institute of Psychiatry, Box P089
| King's College London
| De Crespigny Park
| London
| SE5 8AF
| http://www.kcl.ac.uk/iop/depts/neuroimaging/people/Ginestet,Cedric.aspx
|
|
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