[Rcpp-devel] Passing an exposed function to another C++ function as a parameter
Manuel Castejón Limas
manuel.castejon at gmail.com
Wed Aug 3 08:22:56 CEST 2011
Dear all,
I'm rewriting the AMORE package using Rcpp --- in fact it's more like I'm
having a lot of fun while rewriting the AMORE package thanks to Rcpp.
Nevertheless, I'm facing this little problem that I hope it would be pretty
easy for you to solve.
Let's consider the C++ function Tanh_f0
double
Tanh_f0(double inducedLocalField)
{
return tanh(inducedLocalField);
}
After compilation using inline, Tanh_f0 is exposed to R using Module and
accessible through actMod$Tanh_f0
actMod$Tanh_f0(0.1)
# [1] 0.09966799
Now, I want to pass actMod$Tanh_f0 as a parameter of a function in order to
use the original C++ function Tanh_f0.
testCode <- ' Rcpp::Function fx (myfun);
double result = as<double>(fx(x));
return wrap( result );
'
usingTanhf0 <- cfunction(sig=signature(myfun="function", x="numeric"),
body=testCode,…)
And that indeed works, but when compared to using a simple tanh function it
shows quite a bad performance.
testCode <- ' double value = as<double>(x);
double result = tanh(value);
return wrap( result );
'
usingTanh <- cfunction(sig=signature(x="numeric"), body=testCode, … )
benchmark(usingTanhf0(myfun=actMod$Tanh_f0, x=0.1) , usingTanh( x=0.1),
columns=c("test", "replications", "elapsed", "relative"), order="relative",
replications=1000)
# test replications elapsed
relative
# 2 usingTanh(x = 0.1) 1000 0.004
1
# 1 usingTanhf0(myfun = actMod$Tanh_f0, x = 0.1) 1000 0.080
20
Looks like having to go the R way to get access to Tanh_f0 has a high cost.
In order to be faster, it would be great if I could have access to the
original Tanh_f0 which I guess is pointed to by actMod$Tanh_f0, may be at
the address 0x100153d30 ?
actMod$Tanh_f0
# internal C++ function <0x100153d30>
# signature : double Tanh_f0(double)
After having had a look at RppDE sources, I guess the solution would be to
pass the function as an external pointer; something like :
testCode <- '
typedef double (*funPtr)(double) ;
Rcpp::XPtr< funPtr > fx (myfun);
double result = (*fx)(0.1);
return wrap( result );
'
testCodefun <- cfunction(sig=signature(myfun="C++Function"),
body=testCode,…)
result <- testCodefun(myfun=actMod$Tanh_f0)
But this does NOT work and crashes R.
Any hints?
Thank you for your patience in reading such long message!
Manuel
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