[Rcpp-devel] Trouble installing RInside
Dirk Eddelbuettel
edd at debian.org
Wed Jul 14 15:38:18 CEST 2010
On 14 July 2010 at 15:20, Peter Rhone wrote:
| Hello,
|
| I'm working on a Ubuntu Lucid (10.04) workstation and am trying to
| install RInside.
|
| I have the following R packages installed through the package management
| system:
|
| i r-base - GNU R statistical computation
| i A r-base-core - GNU R core of statistical
| i A r-base-dev - GNU R installation of auxiliary
| i A r-base-html - GNU R html docs for statistical
| i A r-cran-boot - GNU R package for bootstrapping
| i A r-cran-class - GNU R package for classification
| i A r-cran-cluster - GNU R package for cluster analysis
| i A r-cran-codetools - GNU R package providing code
| i A r-cran-foreign - GNU R package to read/write data
| i A r-cran-kernsmooth - GNU R package for kernel
| i A r-cran-lattice - GNU R package for 'Trellis'
| i A r-cran-mass - GNU R package of Venables and
| i A r-cran-matrix - GNU R package of classes for dense
| i A r-cran-mgcv - GNU R package for multiple
| i A r-cran-nlme - GNU R package for (non-)linear
| i A r-cran-nnet - GNU R package for feed-forward
| i A r-cran-rpart - GNU R package for recursive
| i A r-cran-spatial - GNU R package for spatial
| i A r-cran-survival - GNU R package for survival
| i A r-doc-html - GNU R html manuals for statistical
| i A r-recommended - GNU R collection of recommended
Good. You could also get r-cran-rcpp from Ubuntu, but it would be dated to
whenever the last snapshot was.
| I downloaded both Rcpp_0.8.4.tar.gz and RInside_0.2.2.tar.gz. I could
| install Rcpp without any problems:
|
|
| peter at beluga:~/Downloads/R$ R CMD INSTALL Rcpp_0.8.4.tar.gz
| WARNING: ignoring environment value of R_HOME
| * installing to library ‘/home/peter/R/library’
| * installing *source* package ‘Rcpp’ ...
| ** libs
| g++ -I/usr/share/R/include -I../inst/include/ -fpic -g -O2 -c
| Date.cpp -o Date.o
[... all good...]
| * DONE (Rcpp)
|
|
|
| ...but RInside failed:
|
| peter at beluga:~/Downloads/R$ R CMD INSTALL RInside_0.2.2.tar.gz
| WARNING: ignoring environment value of R_HOME
| * installing to library ‘/home/peter/R/library’
| * installing *source* package ‘RInside’ ...
| ** libs
| ** arch -
| /usr/lib64/R/bin/R --vanilla --slave < tools/RInsideEnvVars.r >
| RInsideEnvVars.h
| /usr/lib64/R/bin/R --vanilla --slave < tools/RInsideAutoloads.r >
| RInsideAutoloads.h
| g++ -I/usr/share/R/include -Wall -I/usr/share/R/include
| -I/home/peter/R/library/Rcpp/include -fpic -I.
| -I/usr/share/R/include -g -O2 -c MemBuf.cpp -o MemBuf.o
| /bin/bash: g++: command not found
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
That seems inconsistent with what you have shown above. Either you have g++
or you don't. Did you do any tricks with your installation?
For what it is worth, I just hit
R CMD INSTALL ~/www/code/rinside/RInside_0.2.2.tar.fz
ie using the very tarball you downloaded and it installs just fine.
So so far, this would appear to be an issue local to your system.
Dirk
| make: *** [MemBuf.o] Error 127
| ERROR: compilation failed for package ‘RInside’
| * removing ‘/home/peter/R/library/RInside’
|
|
| The result is the same if I try to install it from within R using
| install.packages("RInside",lib="~/R/library")
|
| I have set R_HOME and R_LIBS_USER
| export R_HOME="/usr"
| export R_LIBS_USER="~/R/library"
|
|
| Any help would be greatly appreciated.
|
| -Peter
|
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--
Regards, Dirk
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