[Rcpp-commits] r4530 - testlogs
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Sun Sep 22 05:13:48 CEST 2013
Author: edd
Date: 2013-09-22 05:13:45 +0200 (Sun, 22 Sep 2013)
New Revision: 4530
Added:
testlogs/Rcpp-Summary-20130319.R
testlogs/Rcpp-Summary-20130622.R
testlogs/Rcpp-Summary-20130921.R
testlogs/Rcpp-check-20130319-2138.txt
testlogs/Rcpp-check-20130921-1222.txt
testlogs/result-20130319-233519.RData
testlogs/result-20130319-233519.txt
testlogs/result-20130620-075629.RData
testlogs/result-20130620-075629.txt
testlogs/result-20130921-173123.RData
testlogs/result-20130921-173123.txt
Log:
current and previous regression test logs
Added: testlogs/Rcpp-Summary-20130319.R
===================================================================
--- testlogs/Rcpp-Summary-20130319.R (rev 0)
+++ testlogs/Rcpp-Summary-20130319.R 2013-09-22 03:13:45 UTC (rev 4530)
@@ -0,0 +1,63 @@
+
+goodPkg <- c("acer", "ALKr", "Amelia", "apcluster", "bcp", "bfa",
+ "bfp", "bifactorial", "blockcluster", "ccaPP", "cda",
+ "clusteval", "ConConPiWiFun", "ecp", "fastGHQuad",
+ "fdaMixed", "forecast", "gof", "growcurves", "GUTS",
+ "KernSmoothIRT", "Kmisc", "LaF", "minqa", "mMRMe",
+ "multmod", "mvabund", "MVB", "NetworkAnalysis", "oem",
+ "openair", "parser", "phom", "phylobase", "planar",
+ "psgp", "quadrupen", "Rchemcpp", "Rclusterpp",
+ "RcppArmadillo", "RcppBDT", "rcppbugs", "RcppClassic",
+ "RcppClassicExamples", "RcppCNPy", "RcppDE", "RcppEigen",
+ "RcppExamples", "RcppGSL", "RcppOctave", "RcppRoll",
+ "RcppSMC", "RcppXts", "rexpokit", "rforensicbatwing",
+ "rgam", "RInside", "Rmalchains", "Rmessenger", "Rmixmod",
+ "robustgam", "robustHD", "rococo", "RProtoBuf",
+ "RQuantLib", "RSNNS", "RSofia", "rugarch",
+ "RVowpalWabbit", "SBSA", "sdcMicro", "simFrame",
+ "sparseHessianFD", "sparseLTSEigen", "SpatialTools",
+ "stochvol", "survSNP", "termstrc", "tmg", "transmission",
+ "transnet", "trustOptim", "unmarked", "waffect",
+ "wordcloud", "zic" )
+
+badPkg <- c("auteur", "classify", "ExactNumCI", "EpiContactTrace",
+ "fugeR", "GeneticTools", "gMWT", "gRbase", "gRim",
+ "HLMdiag", "httpuv", "jaatha", "marked", "maxent", "mets",
+ "mirt", "ngspatial", "orQA", "PReMiuM", "sdcTable",
+ "spacodir", "stream", "surveillance", "VIM", "WideLM" )
+
+bad4missing <- c("auteur", # geiger
+ "classify", # R2WinBugs, R2jags
+ "EpiContactTrace", # ‘igraph0’ ‘R2HTML’
+ "fugeR", # snowfall
+ "GeneticTools", # ‘gMWT’ ‘snpStats’
+ "gMWT", # clinfun
+ "gRbase", # fastmatch RBGL
+ "gRim", # ‘gRbase’ ‘gRain’ ‘doBy’
+ "HLMdiag", # 'mlmRev'
+ "jaatha", # ‘phyclust’
+ "marked", # ‘optimx’ ‘R2admb’
+ "maxent", # tm
+ "mets", # ‘lava’ ‘timereg’ ‘prodlim’
+ "mirt", # ‘psych’ ‘GPArotation’
+ "ngspatial", # ‘batchmeans’
+ "orQA", # ‘genefilter’
+ "PReMiuM", # clue
+ "sdcTable", # lpSolveAPI
+ "spacodir", # picante
+ "stream", # ‘proxy’ ‘clusterGeneration’ ‘fpc’ ‘birch’ ‘clue’ ‘mlbench’
+ "surveillance", # spatstat
+ "VIM", # vcd
+ "WideLM" # CUDA needs gcc/g++ 4.5 set as CC
+ )
+
+bad4error <- c("ExactNumCI", # needs BOOSTLIB defined, bad src/ file
+ "httpuv") # C++ mixup
+
+
+cat("Good ", length(goodPkg), "\n")
+cat("Bad ", length(badPkg), "\n")
+cat(" MissDep ", length(bad4missing), "\n")
+cat(" Errors ", length(bad4error), "\n")
+cat("Total ", length(goodPkg)+length(badPkg), "\n")
+cat("Error Pct ", length(bad4error)/(length(bad4error)+length(goodPkg)), "\n")
Added: testlogs/Rcpp-Summary-20130622.R
===================================================================
--- testlogs/Rcpp-Summary-20130622.R (rev 0)
+++ testlogs/Rcpp-Summary-20130622.R 2013-09-22 03:13:45 UTC (rev 4530)
@@ -0,0 +1,77 @@
+
+## results here are edited after a second run following manual
+## installation of a number of package missing in the first run
+
+goodPkg <- c("acer", "ALKr", "Amelia", "apcluster", "BayesComm",
+ "bcp", "bfa", "bfp", "bifactorial", "blockcluster",
+ "ccaPP", "cda", "cladoRcpp", "clogitL1", "clusteval",
+ "ConConPiWiFun", "Delaporte", "ecp", "fastGHQuad",
+ "FBFsearch", "forecast", "gRbase", "gRim", "growcurves",
+ "GSE", "GUTS", "httpuv", "jaatha", "Kmisc", "maxent",
+ "minqa", "MPTinR", "msgl", "multmod", "mvabund", "MVB",
+ "NetworkAnalysis", "oem", "phom", "phylobase", "planar",
+ "psgp", "RcppArmadillo", "RcppBDT", "rcppbugs",
+ "RcppClassic", "RcppClassicExamples", "RcppCNPy",
+ "RcppDE", "RcppEigen", "RcppExamples", "RcppGSL",
+ "RcppOctave", "RcppProgress", "RcppRoll", "RcppSMC",
+ "RcppXts", "rexpokit", "rforensicbatwing", "rgam",
+ "RInside", "Rmalschains", "RMessenger", "rmgarch",
+ "Rmixmod", "robustgam", "robustHD", "rococo",
+ "RProtoBuf", "RQuantLib", "RSNNS", "RSofia", "rugarch",
+ "RVowpalWabbit", "SBSA", "sdcMicro", "sequences",
+ "simFrame", "sparseHessianFD", "sparseLTSEigen",
+ "SpatialTools", "stochvol", "survSNP", "tagcloud",
+ "termstrc", "tmg", "transmission", "trustOptim",
+ "unmarked", "waffect", "WideLM", "wordcloud")
+
+badPkg <- c("ALDqr", "classify", "diversitree", "EpiContactTrace",
+ "ExactNumCI", "FastPCS", "fdaMixed", "fugeR", "geiger",
+ "GeneticTools", "gMWT", "GOsummaries", "HLMdiag", "LaF",
+ "marked", "mets", "mirt", "miscF", "ngspatial", "openair",
+ "orQA", "PReMiuM", "quadrupen", "sdcTable", "sirt",
+ "spacodiR", "stream", "surveillance", "tbart", "transnet",
+ "VIM")
+
+bad4missing <- c("ALDqr", # 'HyperbolicDist’ ‘sn’
+ "classify", # ‘R2WinBUGS’ ‘R2jags’
+ "diversitree", # ‘deSolve’ ‘subplex’
+ "EpiContactTrace", # ‘igraph0’
+ "FastPCS", # ‘matrixStats’
+ "fugeR", # snowfall
+ "geiger", # ‘msm’ ‘subplex’ ‘deSolve’ ‘coda’ ‘ncbit’
+ "GeneticTools", # ‘gMWT’ ‘snpStats’
+ "gMWT", # ‘clinfun’
+ "GOsummaries", # ‘gProfileR’ ‘limma’
+ "HLMdiag", # ‘mlmRev’
+ "LaF", # 'yaml'
+ "marked", # ‘optimx’ ‘coda’ ‘R2admb’
+ "mets", # ‘lava’ ‘timereg’ ‘prodlim’
+ "mirt", # ‘GPArotation’
+ "miscF", # ‘MCMCpack’
+ "ngspatial", # ‘batchmeans’
+ "openair", # ‘latticeExtra’ ‘hexbin’ ‘RgoogleMaps’ ‘png’ ‘mapdata’
+ "orQA", # ‘genefilter’
+ "PReMiuM", # ‘clue’
+ "sdcTable", # ‘lpSolveAPI’
+ "sirt", # ‘pbivnorm’ ‘sfsmisc’
+ "spacodiR", # ‘picante’
+ "stream", # ‘proxy’ ‘rJava’ ‘clusterGeneration’ ‘fpc’ ‘birch’ ‘clue’ ‘mlbench’
+ "surveillance", # ‘spatstat’
+ "tbart", # ‘GISTools’
+ "transnet", # ‘rJava’
+ "VIM") # ‘vcd’
+
+## these fail initially but can all be run with some extra effort
+bad4fixable <- c("ExactNumCI", # needs BOOSTLIB defined, bad src/ file
+ "fdaMixed", # no x11() device, need xvfb-run wrapper
+ "KernSmoothIRT") # rgl failed, needs full x11 session
+
+bad4error <- c("quadrupen") # killed after fscking six hours of cross-validation (??)
+
+cat("Good ", length(goodPkg), "\n")
+cat("Bad ", length(bad4missing)+length(bad4fixable)+length(bad4error), "\n")
+cat(" MissDep ", length(bad4missing), "\n")
+cat(" Fixabled ", length(bad4fixable), "\n")
+cat(" Borked ", length(bad4error), "\n")
+cat("Total ", length(goodPkg)+length(bad4missing)+length(bad4fixable)+length(bad4error), "\n")
+cat("Error Pct ", length(bad4error)/(length(bad4error)+length(bad4fixable)+length(goodPkg)), "\n")
Added: testlogs/Rcpp-Summary-20130921.R
===================================================================
--- testlogs/Rcpp-Summary-20130921.R (rev 0)
+++ testlogs/Rcpp-Summary-20130921.R 2013-09-22 03:13:45 UTC (rev 4530)
@@ -0,0 +1,77 @@
+
+## results here are edited after a second run following manual
+## installation of a number of package missing in the first run
+
+
+goodPkg <- c("accelerometry", "acer", "AdaptiveSparsity", "ALKr", "Amelia",
+ "apcluster", "BayesComm", "bcp", "bfa", "bfp", "bifactorial",
+ "blockcluster", "ccaPP", "clogitL1", "clusteval", "ConConPiWiFun",
+ "coneproj", "Delaporte", "ecp", "EpiContactTrace", "fastGHQuad",
+ "FastPCS", "FastRCS", "FBFsearch", "fdaMixed", "forecast", "gRbase",
+ "gRim", "GSE", "GUTS", "httpuv", "inarmix", "jaatha", "Kmisc",
+ "maxent", "minqa", "MPTinR", "msgl", "multmod", "mvabund", "MVB",
+ "NetSim", "oem", "phom", "phylobase", "prospectr", "psgp", "Rankcluster",
+ "RcppArmadillo", "RcppBDT", "rcppbugs", "RcppClassic", "RcppClassicExamples",
+ "RcppDE", "RcppEigen", "RcppExamples", "RcppGSL", "RcppOctave",
+ "RcppProgress", "RcppRoll", "RcppSMC", "RcppXts", "rexpokit",
+ "rforensicbatwing", "rgam", "RInside", "Rmalschains", "RMessenger",
+ "rmgarch", "Rmixmod", "robustgam", "robustHD", "rococo", "rotations",
+ "RProtoBuf", "RQuantLib", "RSNNS", "RSofia", "rugarch", "RVowpalWabbit",
+ "SBSA", "sdcMicro", "sequences", "simFrame", "sparseHessianFD",
+ "sparseLTSEigen", "SpatialTools", "stochvol", "survSNP", "tagcloud",
+ "termstrc", "tmg", "transmission", "trustOptim", "unmarked",
+ "waffect", "WideLM", "wordcloud", "zic")
+
+
+bad4missing <- c("ALDqr", # 'HyperbolicDist’
+ "CDM", # sirt, TAM
+ "classify", # ‘R2WinBUGS’ ‘R2jags’
+ "climdex.pcic", # 'PCIct'
+ "diversitree", # ‘deSolve’ ‘subplex’
+ "EpiContactTrace", # ‘igraph0’
+ "FastPCS", # ‘matrixStats’
+ "fugeR", # snowfall
+ "Funclustering", # fda
+ "geiger", # ‘msm’ ‘subplex’ ‘deSolve’ ‘coda’ ‘ncbit’
+ "GeneticTools", # ‘gMWT’ ‘snpStats’
+ "gMWT", # ‘clinfun’
+ "GOsummaries", # ‘gProfileR’ ‘limma’
+ "HLMdiag", # ‘mlmRev’
+ "LaF", # 'yaml'
+ "lme4", # mlmRev
+ "marked", # ‘optimx’ ‘coda’ ‘R2admb’
+ "mets", # ‘lava’ ‘timereg’ ‘prodlim’
+ "mirt", # ‘GPArotation’
+ "miscF", # ‘MCMCpack’
+ "ngspatial", # ‘batchmeans’
+ "openair", # ‘latticeExtra’ ‘hexbin’ ‘RgoogleMaps’ ‘png’ ‘mapdata’
+ "orQA", # ‘genefilter’
+ "PReMiuM", # ‘clue’
+ "sdcTable", # ‘lpSolveAPI’
+ "sirt", # ‘pbivnorm’ ‘sfsmisc’
+ "spacodiR", # ‘picante’
+ "surveillance", # ‘spatstat’
+ "TAM", # ‘tensor’ ‘sfsmisc’ ‘GPArotation’ ‘psych’
+ "tbart", # ‘GISTools’
+ "VIM") # ‘vcd’
+
+bad4rcpp <- c("cda", # Exporter.h
+ "growcurves", # sugar
+ "planar", # Exporter.h
+ "RcppCNPy") # Exporter.h
+
+## these fail initially but can all be run with some extra effort
+bad4notrcpp <- c("ExactNumCI", # needs BOOSTLIB defined, bad src/ file
+ "KernSmoothIRT", # rgl failed, needs full x11 session
+ "NetworkAnalysis") # igraph interaction?
+
+good <- length(goodPkg)
+bad <- length(bad4missing) + length(bad4rcpp) + length(bad4notrcpp)
+
+cat("Good ", good, "\n")
+cat("Bad ", bad, "\n")
+cat(" RcppErr ", length(bad4rcpp), "\n")
+cat(" MissDep ", length(bad4missing), "\n")
+cat(" NotRcpp ", length(bad4notrcpp), "\n")
+cat("Total ", good + bad, "\n")
+cat("Error Pct ", length(bad4rcpp) / (good + bad), "\n")
Added: testlogs/Rcpp-check-20130319-2138.txt
===================================================================
--- testlogs/Rcpp-check-20130319-2138.txt (rev 0)
+++ testlogs/Rcpp-check-20130319-2138.txt 2013-09-22 03:13:45 UTC (rev 4530)
@@ -0,0 +1,264 @@
+Started at 2013-03-19 21:37:47
+ [1] "acer" "ALKr" "Amelia"
+ [4] "apcluster" "auteur" "bcp"
+ [7] "bfa" "bfp" "bifactorial"
+ [10] "blockcluster" "ccaPP" "cda"
+ [13] "classify" "clusteval" "ConConPiWiFun"
+ [16] "ecp" "EpiContactTrace" "ExactNumCI"
+ [19] "fastGHQuad" "fdaMixed" "forecast"
+ [22] "fugeR" "GeneticTools" "gMWT"
+ [25] "gof" "gRbase" "gRim"
+ [28] "growcurves" "GUTS" "HLMdiag"
+ [31] "httpuv" "jaatha" "KernSmoothIRT"
+ [34] "Kmisc" "Kmisc" "LaF"
+ [37] "marked" "maxent" "mets"
+ [40] "minqa" "mirt" "mRMRe"
+ [43] "multmod" "mvabund" "MVB"
+ [46] "NetworkAnalysis" "ngspatial" "oem"
+ [49] "openair" "orQA" "parser"
+ [52] "phom" "phylobase" "planar"
+ [55] "PReMiuM" "psgp" "quadrupen"
+ [58] "Rchemcpp" "Rclusterpp" "RcppArmadillo"
+ [61] "RcppBDT" "rcppbugs" "RcppClassic"
+ [64] "RcppClassicExamples" "RcppCNPy" "RcppDE"
+ [67] "RcppEigen" "RcppExamples" "RcppGSL"
+ [70] "RcppOctave" "RcppRoll" "RcppSMC"
+ [73] "RcppXts" "rexpokit" "rforensicbatwing"
+ [76] "rgam" "RInside" "Rmalschains"
+ [79] "RMessenger" "Rmixmod" "robustgam"
+ [82] "robustHD" "rococo" "RProtoBuf"
+ [85] "RQuantLib" "RSNNS" "RSofia"
+ [88] "rugarch" "RVowpalWabbit" "SBSA"
+ [91] "sdcMicro" "sdcTable" "simFrame"
+ [94] "spacodiR" "sparseHessianFD" "sparseLTSEigen"
+ [97] "SpatialTools" "stochvol" "stream"
+[100] "surveillance" "survSNP" "termstrc"
+[103] "tmg" "transmission" "trustOptim"
+[106] "unmarked" "VIM" "waffect"
+[109] "WideLM" "wordcloud" "zic"
+0 : acer_0.1.2.tar.gz
+0 : ALKr_0.5.tar.gz
+0 : Amelia_1.7.tar.gz
+0 : apcluster_1.3.0.tar.gz
+1 : auteur_0.12.1010.tar.gz
+0 : bcp_3.0.1.tar.gz
+0 : bfa_0.2.3.tar.gz
+0 : bfp_0.0-25.tar.gz
+0 : bifactorial_1.4.7.tar.gz
+0 : blockcluster_2.0.1.tar.gz
+0 : ccaPP_0.2.0.tar.gz
+0 : cda_1.3.tar.gz
+1 : classify_1.1.tar.gz
+0 : clusteval_0.1.tar.gz
+0 : ConConPiWiFun_0.3.tar.gz
+0 : ecp_1.5.2.tar.gz
+1 : EpiContactTrace_0.7.1.tar.gz
+1 : ExactNumCI_1.0.0.tar.gz
+0 : fastGHQuad_0.1-1.tar.gz
+0 : fdaMixed_0.1.tar.gz
+0 : forecast_4.03.tar.gz
+1 : fugeR_0.1.2.tar.gz
+1 : GeneticTools_0.2.tar.gz
+1 : gMWT_0.2.1.tar.gz
+0 : gof_0.8-2.tar.gz
+1 : gRbase_1.6-8.tar.gz
+1 : gRim_0.1-15.tar.gz
+0 : growcurves_0.2.3.4.tar.gz
+0 : GUTS_0.2.8.tar.gz
+1 : HLMdiag_0.2.0.tar.gz
+1 : httpuv_1.0.5.tar.gz
+1 : jaatha_2.0.2.tar.gz
+0 : KernSmoothIRT_5.0.tar.gz
+0 : Kmisc_0.4.0.tar.gz Kmisc_0.4.0-1.tar.gz
+0 : Kmisc_0.4.0.tar.gz Kmisc_0.4.0-1.tar.gz
+0 : LaF_0.4.tar.gz
+1 : marked_1.0.9.tar.gz
+1 : maxent_1.3.2.tar.gz
+1 : mets_0.1-13.tar.gz
+0 : minqa_1.2.1.tar.gz
+1 : mirt_0.6.0.tar.gz
+0 : mRMRe_1.0.2.tar.gz
+0 : multmod_0.9.tar.gz
+0 : mvabund_3.6.11.tar.gz
+0 : MVB_1.1.tar.gz
+0 : NetworkAnalysis_0.3-1.tar.gz
+1 : ngspatial_0.5-2.tar.gz
+0 : oem_1.02.tar.gz
+0 : openair_0.8-1.tar.gz
+1 : orQA_0.2.1.tar.gz
+0 : parser_0.1.tar.gz
+0 : phom_1.0.1.tar.gz
+0 : phylobase_0.6.5.tar.gz
+0 : planar_1.2.4.tar.gz
+1 : PReMiuM_3.0.16.tar.gz
+0 : psgp_0.3-2.tar.gz
+0 : quadrupen_0.2-1.tar.gz
+0 : Rchemcpp_1.1.1.tar.gz
+0 : Rclusterpp_0.2.1.tar.gz
+0 : RcppArmadillo_0.3.800.1.tar.gz
+0 : RcppBDT_0.2.1.tar.gz
+0 : rcppbugs_0.1.1.tar.gz
+0 : RcppClassic_0.9.3.tar.gz
+0 : RcppClassicExamples_0.1.1.tar.gz
+0 : RcppCNPy_0.2.0.tar.gz
+0 : RcppDE_0.1.1.tar.gz
+0 : RcppEigen_0.3.1.2.1.tar.gz
+0 : RcppExamples_0.1.6.tar.gz
+0 : RcppGSL_0.2.0.tar.gz
+0 : RcppOctave_0.9.tar.gz
+0 : RcppRoll_0.1.0.tar.gz
+0 : RcppSMC_0.1.1.tar.gz
+0 : RcppXts_0.0.4.tar.gz
+0 : rexpokit_0.24.tar.gz
+0 : rforensicbatwing_1.1.tar.gz
+0 : rgam_0.6.1.tar.gz
+0 : RInside_0.2.10.tar.gz
+0 : Rmalschains_0.1-2.tar.gz
+0 : RMessenger_0.1.1.tar.gz
+0 : Rmixmod_1.1.3.tar.gz
+0 : robustgam_0.1.5.tar.gz
+1 : robustHD_0.3.0.tar.gz
+0 : rococo_1.1.0.tar.gz
+0 : RProtoBuf_0.2.6.tar.gz
+0 : RQuantLib_0.3.10.tar.gz
+0 : RSNNS_0.4-3.tar.gz
+0 : RSofia_1.1.tar.gz
+0 : rugarch_1.0-16.tar.gz
+0 : RVowpalWabbit_0.0.5.tar.gz
+0 : SBSA_0.2.0.tar.gz
+0 : sdcMicro_3.1.2.tar.gz
+1 : sdcTable_0.10.2.tar.gz
+0 : simFrame_0.5.0.tar.gz
+1 : spacodiR_0.13.0115.tar.gz
+0 : sparseHessianFD_0.1.0.tar.gz
+1 : sparseLTSEigen_0.1.2.tar.gz
+0 : SpatialTools_0.4.3.tar.gz
+0 : stochvol_0.5-1.tar.gz
+1 : stream_0.1-0.tar.gz
+1 : surveillance_1.5-2.tar.gz
+0 : survSNP_0.21-5.tar.gz
+0 : termstrc_1.3.5.tar.gz
+0 : tmg_0.1.tar.gz
+0 : transmission_0.1.tar.gz
+0 : transnet_0.1.tar.gz
+0 : trustOptim_0.8.0.tar.gz
+0 : unmarked_0.9-9.tar.gz
+1 : VIM_3.0.3.tar.gz
+0 : waffect_1.2.tar.gz
+1 : WideLM_0.1-1.tar.gz
+0 : wordcloud_2.2.tar.gz
+0 : zic_0.7.5.tar.gz
+ pkg res
+1 acer 0
+2 ALKr 0
+3 Amelia 0
+4 apcluster 0
+5 auteur 1
+6 bcp 0
+7 bfa 0
+8 bfp 0
+9 bifactorial 0
+10 blockcluster 0
+11 ccaPP 0
+12 cda 0
+13 classify 1
+14 clusteval 0
+15 ConConPiWiFun 0
+16 ecp 0
+17 EpiContactTrace 1
+18 ExactNumCI 1
+19 fastGHQuad 0
+20 fdaMixed 0
+21 forecast 0
+22 fugeR 1
+23 GeneticTools 1
+24 gMWT 1
+25 gof 0
+26 gRbase 1
+27 gRim 1
+28 growcurves 0
+29 GUTS 0
+30 HLMdiag 1
+31 httpuv 1
+32 jaatha 1
+33 KernSmoothIRT 0
+34 Kmisc 0
+35 Kmisc 0
+36 LaF 0
+37 marked 1
+38 maxent 1
+39 mets 1
+40 minqa 0
+41 mirt 1
+42 mRMRe 0
+43 multmod 0
+44 mvabund 0
+45 MVB 0
+46 NetworkAnalysis 0
+47 ngspatial 1
+48 oem 0
+49 openair 0
+50 orQA 1
+51 parser 0
+52 phom 0
+53 phylobase 0
+54 planar 0
+55 PReMiuM 1
+56 psgp 0
+57 quadrupen 0
+58 Rchemcpp 0
+59 Rclusterpp 0
+60 RcppArmadillo 0
+61 RcppBDT 0
+62 rcppbugs 0
+63 RcppClassic 0
+64 RcppClassicExamples 0
+65 RcppCNPy 0
+66 RcppDE 0
+67 RcppEigen 0
+68 RcppExamples 0
+69 RcppGSL 0
+70 RcppOctave 0
+71 RcppRoll 0
+72 RcppSMC 0
+73 RcppXts 0
+74 rexpokit 0
+75 rforensicbatwing 0
+76 rgam 0
+77 RInside 0
+78 Rmalschains 0
+79 RMessenger 0
+80 Rmixmod 0
+81 robustgam 0
+82 robustHD 1
+83 rococo 0
+84 RProtoBuf 0
+85 RQuantLib 0
+86 RSNNS 0
+87 RSofia 0
+88 rugarch 0
+89 RVowpalWabbit 0
+90 SBSA 0
+91 sdcMicro 0
+92 sdcTable 1
+93 simFrame 0
+94 spacodiR 1
+95 sparseHessianFD 0
+96 sparseLTSEigen 1
+97 SpatialTools 0
+98 stochvol 0
+99 stream 1
+100 surveillance 1
+101 survSNP 0
+102 termstrc 0
+103 tmg 0
+104 transmission 0
+105 transnet 0
+106 trustOptim 0
+107 unmarked 0
+108 VIM 1
+109 waffect 0
+110 WideLM 1
+111 wordcloud 0
+112 zic 0
+Ended at 2013-03-19 23:35:19
Added: testlogs/Rcpp-check-20130921-1222.txt
===================================================================
--- testlogs/Rcpp-check-20130921-1222.txt (rev 0)
+++ testlogs/Rcpp-check-20130921-1222.txt 2013-09-22 03:13:45 UTC (rev 4530)
@@ -0,0 +1,323 @@
+Started at 2013-09-21 12:22:52
+ [1] "accelerometry" "acer" "AdaptiveSparsity"
+ [4] "ALDqr" "ALKr" "Amelia"
+ [7] "apcluster" "BayesComm" "bcp"
+ [10] "bfa" "bfp" "bifactorial"
+ [13] "BioGeoBEARS" "blockcluster" "ccaPP"
+ [16] "cda" "CDM" "classify"
+ [19] "climdex.pcic" "clogitL1" "clusteval"
+ [22] "ConConPiWiFun" "coneproj" "Delaporte"
+ [25] "diversitree" "ecp" "EpiContactTrace"
+ [28] "ExactNumCI" "fastGHQuad" "FastPCS"
+ [31] "FastRCS" "FBFsearch" "fdaMixed"
+ [34] "forecast" "fugeR" "Funclustering"
+ [37] "geiger" "GeneticTools" "gMWT"
+ [40] "GOsummaries" "gRbase" "gRim"
+ [43] "growcurves" "GSE" "GUTS"
+ [46] "HLMdiag" "httpuv" "inarmix"
+ [49] "jaatha" "KernSmoothIRT" "Kmisc"
+ [52] "LaF" "lme4" "marked"
+ [55] "maxent" "mets" "minqa"
+ [58] "mirt" "miscF" "MPTinR"
+ [61] "msgl" "multmod" "mvabund"
+ [64] "MVB" "NetSim" "NetworkAnalysis"
+ [67] "ngspatial" "oem" "openair"
+ [70] "orQA" "phom" "phylobase"
+ [73] "planar" "PReMiuM" "prospectr"
+ [76] "psgp" "quadrupen" "Rankcluster"
+ [79] "RcppArmadillo" "RcppBDT" "rcppbugs"
+ [82] "RcppClassic" "RcppClassicExamples" "RcppCNPy"
+ [85] "RcppDE" "RcppEigen" "RcppExamples"
+ [88] "RcppGSL" "RcppOctave" "RcppProgress"
+ [91] "RcppRoll" "RcppSMC" "RcppXts"
+ [94] "rexpokit" "rforensicbatwing" "rgam"
+ [97] "RInside" "Rmalschains" "RMessenger"
+[100] "rmgarch" "Rmixmod" "robustgam"
+[103] "robustHD" "rococo" "rotations"
+[106] "RProtoBuf" "RQuantLib" "RSNNS"
+[109] "RSofia" "rugarch" "RVowpalWabbit"
+[112] "SBSA" "sdcMicro" "sdcTable"
+[115] "sequences" "simFrame" "sirt"
+[118] "spacodiR" "sparseHessianFD" "sparseLTSEigen"
+[121] "SpatialTools" "stochvol" "surveillance"
+[124] "survSNP" "tagcloud" "TAM"
+[127] "tbart" "termstrc" "tmg"
+[130] "transmission" "trustOptim" "unmarked"
+[133] "VIM" "waffect" "WideLM"
+[136] "wordcloud" "zic"
+0 : accelerometry_2.0.tar.gz
+0 : acer_0.1.2.tar.gz
+0 : AdaptiveSparsity_1.2.tar.gz
+1 : ALDqr_0.2.tar.gz
+0 : ALKr_0.5.3.tar.gz
+0 : Amelia_1.7.2.tar.gz
+0 : apcluster_1.3.2.tar.gz
+0 : BayesComm_0.1-0.tar.gz
+0 : bcp_3.0.1.tar.gz
+0 : bfa_0.3.tar.gz
+0 : bfp_0.0-25.tar.gz
+0 : bifactorial_1.4.7.tar.gz
+1 : BioGeoBEARS_0.2.1.tar.gz
+0 : blockcluster_3.0.tar.gz
+0 : ccaPP_0.2.0.tar.gz
+1 : cda_1.3.3.tar.gz
+1 : CDM_2.3-15.tar.gz
+1 : classify_1.1.tar.gz
+1 : climdex.pcic_0.7-2.tar.gz
+0 : clogitL1_1.0.tar.gz
+0 : clusteval_0.1.tar.gz
+0 : ConConPiWiFun_0.4.1.tar.gz
+0 : coneproj_1.1.tar.gz
+0 : Delaporte_1.0-1.tar.gz
+1 : diversitree_0.9-6.tar.gz
+0 : ecp_1.5.4.tar.gz
+0 : EpiContactTrace_0.8.6.tar.gz
+1 : ExactNumCI_1.0.0.tar.gz
+0 : fastGHQuad_0.1-1.tar.gz
+0 : FastPCS_0.0.6.tar.gz
+0 : FastRCS_0.0.1.tar.gz
+0 : FBFsearch_1.0.tar.gz
+0 : fdaMixed_0.2.tar.gz
+0 : forecast_4.06.tar.gz
+1 : fugeR_0.1.2.tar.gz
+1 : Funclustering_1.0.tar.gz
+1 : geiger_1.99-3.tar.gz
+1 : GeneticTools_0.2.tar.gz
+1 : gMWT_0.2.1.tar.gz
+1 : GOsummaries_1.0.tar.gz
+0 : gRbase_1.6-12.tar.gz
+0 : gRim_0.1-17.tar.gz
+1 : growcurves_0.2.3.5.tar.gz
+0 : GSE_3.0.tar.gz
+0 : GUTS_0.2.8.tar.gz
+1 : HLMdiag_0.2.2.tar.gz
+0 : httpuv_1.1.0.tar.gz
+0 : inarmix_0.2.tar.gz
+0 : jaatha_2.1.tar.gz
+1 : KernSmoothIRT_6.0.tar.gz
+0 : Kmisc_0.4.0-1.tar.gz
+1 : LaF_0.5.tar.gz
+1 : lme4_1.0-4.tar.gz
+1 : marked_1.1.2.tar.gz
+0 : maxent_1.3.3.tar.gz
+1 : mets_0.2.4.tar.gz
+0 : minqa_1.2.1.tar.gz
+1 : mirt_0.9.0.tar.gz
+1 : miscF_0.1-2.tar.gz
+0 : MPTinR_1.1.8.tar.gz
+0 : msgl_0.1.4.tar.gz
+0 : multmod_1.0.tar.gz
+0 : mvabund_3.7.0.tar.gz
+0 : MVB_1.1.tar.gz
+0 : NetSim_0.9.tar.gz
+1 : NetworkAnalysis_0.3-1.tar.gz
+1 : ngspatial_1.0-1.tar.gz
+0 : oem_1.02.tar.gz
+1 : openair_0.8-5.tar.gz
+1 : orQA_0.2.1.tar.gz
+0 : phom_1.0.2.tar.gz
+0 : phylobase_0.6.5.2.tar.gz
+1 : planar_1.2.4.tar.gz
+1 : PReMiuM_3.0.20.tar.gz
+0 : prospectr_0.1.tar.gz
+0 : psgp_0.3-3.tar.gz
+1 : quadrupen_0.2-2.tar.gz
+0 : Rankcluster_0.90.3.tar.gz
+0 : RcppArmadillo_0.3.910.0.tar.gz
+0 : RcppBDT_0.2.1.tar.gz
+0 : rcppbugs_0.1.4.tar.gz
+0 : RcppClassic_0.9.4.tar.gz
+0 : RcppClassicExamples_0.1.1.tar.gz
+1 : RcppCNPy_0.2.0.tar.gz
+0 : RcppDE_0.1.1.tar.gz
+0 : RcppEigen_0.3.1.2.1.tar.gz
+0 : RcppExamples_0.1.6.tar.gz
+0 : RcppGSL_0.2.0.tar.gz
+0 : RcppOctave_0.9.5.tar.gz
+0 : RcppProgress_0.1.tar.gz
+0 : RcppRoll_0.1.0.tar.gz
+0 : RcppSMC_0.1.1.tar.gz
+0 : RcppXts_0.0.4.tar.gz
+0 : rexpokit_0.24.1.tar.gz
+0 : rforensicbatwing_1.1.tar.gz
+0 : rgam_0.6.1.tar.gz
+0 : RInside_0.2.10.tar.gz
+0 : Rmalschains_0.2-1.tar.gz
+0 : RMessenger_0.1.3.tar.gz
+0 : rmgarch_1.2-0.tar.gz
+0 : Rmixmod_1.1.3.tar.gz
+0 : robustgam_0.1.7.tar.gz
+0 : robustHD_0.3.2.tar.gz
+0 : rococo_1.1.0.tar.gz
+0 : rotations_0.1.tar.gz
+0 : RProtoBuf_0.3.1.tar.gz
+0 : RQuantLib_0.3.10.tar.gz
+0 : RSNNS_0.4-3.tar.gz
+0 : RSofia_1.1.tar.gz
+0 : rugarch_1.2-7.tar.gz
+0 : RVowpalWabbit_0.0.5.tar.gz
+0 : SBSA_0.2.0.tar.gz
+0 : sdcMicro_4.0.3.tar.gz
+1 : sdcTable_0.10.2.tar.gz
+0 : sequences_0.5.7.tar.gz
+0 : simFrame_0.5.0.tar.gz
+1 : sirt_0.36-30.tar.gz
+1 : spacodiR_0.13.0115.tar.gz
+0 : sparseHessianFD_0.1.0.tar.gz
+0 : sparseLTSEigen_0.1.3.tar.gz
+0 : SpatialTools_0.5.4.tar.gz
+0 : stochvol_0.6-1.tar.gz
+1 : surveillance_1.6-0.tar.gz
+0 : survSNP_0.21-5.tar.gz
+0 : tagcloud_0.1.tar.gz
+1 : TAM_0.7-35.tar.gz
+1 : tbart_0.9.tar.gz
+0 : termstrc_1.3.5.tar.gz
+0 : tmg_0.1.tar.gz
+0 : transmission_0.1.tar.gz
+0 : trustOptim_0.8.1.tar.gz
+0 : unmarked_0.10-2.tar.gz
+1 : VIM_3.0.3.1.tar.gz
+0 : waffect_1.2.tar.gz
+0 : WideLM_0.1-1.tar.gz
+0 : wordcloud_2.4.tar.gz
+0 : zic_0.7.5.tar.gz
+ pkg res
+1 accelerometry 0
+2 acer 0
+3 AdaptiveSparsity 0
+4 ALDqr 1
+5 ALKr 0
+6 Amelia 0
+7 apcluster 0
+8 BayesComm 0
+9 bcp 0
+10 bfa 0
+11 bfp 0
+12 bifactorial 0
+13 BioGeoBEARS 1
+14 blockcluster 0
+15 ccaPP 0
+16 cda 1
+17 CDM 1
+18 classify 1
+19 climdex.pcic 1
+20 clogitL1 0
+21 clusteval 0
+22 ConConPiWiFun 0
+23 coneproj 0
+24 Delaporte 0
+25 diversitree 1
+26 ecp 0
+27 EpiContactTrace 0
+28 ExactNumCI 1
+29 fastGHQuad 0
+30 FastPCS 0
+31 FastRCS 0
+32 FBFsearch 0
+33 fdaMixed 0
+34 forecast 0
+35 fugeR 1
+36 Funclustering 1
+37 geiger 1
+38 GeneticTools 1
+39 gMWT 1
+40 GOsummaries 1
+41 gRbase 0
+42 gRim 0
+43 growcurves 1
+44 GSE 0
+45 GUTS 0
+46 HLMdiag 1
+47 httpuv 0
+48 inarmix 0
+49 jaatha 0
+50 KernSmoothIRT 1
+51 Kmisc 0
+52 LaF 1
+53 lme4 1
+54 marked 1
+55 maxent 0
+56 mets 1
+57 minqa 0
+58 mirt 1
+59 miscF 1
+60 MPTinR 0
+61 msgl 0
+62 multmod 0
+63 mvabund 0
+64 MVB 0
+65 NetSim 0
+66 NetworkAnalysis 1
+67 ngspatial 1
+68 oem 0
+69 openair 1
+70 orQA 1
+71 phom 0
+72 phylobase 0
+73 planar 1
+74 PReMiuM 1
+75 prospectr 0
+76 psgp 0
+77 quadrupen 1
+78 Rankcluster 0
+79 RcppArmadillo 0
+80 RcppBDT 0
+81 rcppbugs 0
+82 RcppClassic 0
+83 RcppClassicExamples 0
+84 RcppCNPy 1
+85 RcppDE 0
+86 RcppEigen 0
+87 RcppExamples 0
+88 RcppGSL 0
+89 RcppOctave 0
+90 RcppProgress 0
+91 RcppRoll 0
+92 RcppSMC 0
+93 RcppXts 0
+94 rexpokit 0
+95 rforensicbatwing 0
+96 rgam 0
+97 RInside 0
+98 Rmalschains 0
+99 RMessenger 0
+100 rmgarch 0
+101 Rmixmod 0
+102 robustgam 0
+103 robustHD 0
+104 rococo 0
+105 rotations 0
+106 RProtoBuf 0
+107 RQuantLib 0
+108 RSNNS 0
+109 RSofia 0
+110 rugarch 0
+111 RVowpalWabbit 0
+112 SBSA 0
+113 sdcMicro 0
+114 sdcTable 1
+115 sequences 0
+116 simFrame 0
+117 sirt 1
+118 spacodiR 1
+119 sparseHessianFD 0
+120 sparseLTSEigen 0
+121 SpatialTools 0
+122 stochvol 0
+123 surveillance 1
+124 survSNP 0
+125 tagcloud 0
+126 TAM 1
+127 tbart 1
+128 termstrc 0
+129 tmg 0
+130 transmission 0
+131 trustOptim 0
+132 unmarked 0
+133 VIM 1
+134 waffect 0
+135 WideLM 0
+136 wordcloud 0
+137 zic 0
+Ended at 2013-09-21 17:31:23
Added: testlogs/result-20130319-233519.RData
===================================================================
(Binary files differ)
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/rcpp -r 4530
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