[Rcpp-commits] r821 - pkg/RcppArmadillo

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Tue Mar 2 16:34:39 CET 2010


Author: edd
Date: 2010-03-02 16:34:38 +0100 (Tue, 02 Mar 2010)
New Revision: 821

Modified:
   pkg/RcppArmadillo/configure
   pkg/RcppArmadillo/configure.in
Log:
actually link with -larmadillo


Modified: pkg/RcppArmadillo/configure
===================================================================
--- pkg/RcppArmadillo/configure	2010-03-02 13:31:33 UTC (rev 820)
+++ pkg/RcppArmadillo/configure	2010-03-02 15:34:38 UTC (rev 821)
@@ -1,13 +1,11 @@
 #! /bin/sh
 # Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.65 for RcppArmadillo 0.1.0.
+# Generated by GNU Autoconf 2.64 for RcppArmadillo 0.1.0.
 #
-#
 # Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
-# 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation,
-# Inc.
+# 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software
+# Foundation, Inc.
 #
-#
 # This configure script is free software; the Free Software Foundation
 # gives unlimited permission to copy, distribute and modify it.
 ## -------------------- ##
@@ -526,8 +524,7 @@
 as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
 
 
-test -n "$DJDIR" || exec 7<&0 </dev/null
-exec 6>&1
+exec 7<&0 </dev/null 6>&1
 
 # Name of the host.
 # hostname on some systems (SVR3.2, Linux) returns a bogus exit status,
@@ -593,7 +590,7 @@
 ac_subst_vars='LTLIBOBJS
 LIBOBJS
 ARMA_VERSION_GE_090
-ARMA_HAS_CUBE
+ARMA_VERSION_GE_070
 PKG_LIBS
 PKG_CPPFLAGS
 RSCRIPT
@@ -1277,7 +1274,7 @@
   LDFLAGS     linker flags, e.g. -L<lib dir> if you have libraries in a
               nonstandard directory <lib dir>
   LIBS        libraries to pass to the linker, e.g. -l<library>
-  CPPFLAGS    (Objective) C/C++ preprocessor flags, e.g. -I<include dir> if
+  CPPFLAGS    C/C++/Objective C preprocessor flags, e.g. -I<include dir> if
               you have headers in a nonstandard directory <include dir>
   CXXCPP      C++ preprocessor
   CC          C compiler command
@@ -1350,7 +1347,7 @@
 if $ac_init_version; then
   cat <<\_ACEOF
 RcppArmadillo configure 0.1.0
-generated by GNU Autoconf 2.65
+generated by GNU Autoconf 2.64
 
 Copyright (C) 2009 Free Software Foundation, Inc.
 This configure script is free software; the Free Software Foundation
@@ -1397,7 +1394,7 @@
 	ac_retval=1
 fi
   eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
-  as_fn_set_status $ac_retval
+  return $ac_retval
 
 } # ac_fn_cxx_try_compile
 
@@ -1434,7 +1431,7 @@
     ac_retval=1
 fi
   eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
-  as_fn_set_status $ac_retval
+  return $ac_retval
 
 } # ac_fn_cxx_try_cpp
 
@@ -1472,7 +1469,7 @@
 	ac_retval=1
 fi
   eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
-  as_fn_set_status $ac_retval
+  return $ac_retval
 
 } # ac_fn_c_try_compile
 
@@ -1601,7 +1598,7 @@
 fi
   rm -rf conftest.dSYM conftest_ipa8_conftest.oo
   eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
-  as_fn_set_status $ac_retval
+  return $ac_retval
 
 } # ac_fn_cxx_try_run
 
@@ -1678,7 +1675,7 @@
   # left behind by Apple's compiler.  We do this before executing the actions.
   rm -rf conftest.dSYM conftest_ipa8_conftest.oo
   eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
-  as_fn_set_status $ac_retval
+  return $ac_retval
 
 } # ac_fn_cxx_try_link
 cat >config.log <<_ACEOF
@@ -1686,7 +1683,7 @@
 running configure, to aid debugging if configure makes a mistake.
 
 It was created by RcppArmadillo $as_me 0.1.0, which was
-generated by GNU Autoconf 2.65.  Invocation command line was
+generated by GNU Autoconf 2.64.  Invocation command line was
 
   $ $0 $@
 
@@ -1939,7 +1936,7 @@
 for ac_site_file in "$ac_site_file1" "$ac_site_file2"
 do
   test "x$ac_site_file" = xNONE && continue
-  if test /dev/null != "$ac_site_file" && test -r "$ac_site_file"; then
+  if test -r "$ac_site_file"; then
     { $as_echo "$as_me:${as_lineno-$LINENO}: loading site script $ac_site_file" >&5
 $as_echo "$as_me: loading site script $ac_site_file" >&6;}
     sed 's/^/| /' "$ac_site_file" >&5
@@ -1948,9 +1945,9 @@
 done
 
 if test -r "$cache_file"; then
-  # Some versions of bash will fail to source /dev/null (special files
-  # actually), so we avoid doing that.  DJGPP emulates it as a regular file.
-  if test /dev/null != "$cache_file" && test -f "$cache_file"; then
+  # Some versions of bash will fail to source /dev/null (special
+  # files actually), so we avoid doing that.
+  if test -f "$cache_file"; then
     { $as_echo "$as_me:${as_lineno-$LINENO}: loading cache $cache_file" >&5
 $as_echo "$as_me: loading cache $cache_file" >&6;}
     case $cache_file in
@@ -2170,30 +2167,32 @@
 ... rest of stderr output deleted ...
          10q' conftest.err >conftest.er1
     cat conftest.er1 >&5
+    rm -f conftest.er1 conftest.err
   fi
-  rm -f conftest.er1 conftest.err
   $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
   test $ac_status = 0; }
 done
 
 cat confdefs.h - <<_ACEOF >conftest.$ac_ext
 /* end confdefs.h.  */
-
+#include <stdio.h>
 int
 main ()
 {
+FILE *f = fopen ("conftest.out", "w");
+ return ferror (f) || fclose (f) != 0;
 
   ;
   return 0;
 }
 _ACEOF
 ac_clean_files_save=$ac_clean_files
-ac_clean_files="$ac_clean_files a.out a.out.dSYM a.exe b.out"
+ac_clean_files="$ac_clean_files a.out a.out.dSYM a.exe b.out conftest.out"
 # Try to create an executable without -o first, disregard a.out.
 # It will help us diagnose broken compilers, and finding out an intuition
 # of exeext.
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C++ compiler works" >&5
-$as_echo_n "checking whether the C++ compiler works... " >&6; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for C++ compiler default output file name" >&5
+$as_echo_n "checking for C++ compiler default output file name... " >&6; }
 ac_link_default=`$as_echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
 
 # The possible output files:
@@ -2255,10 +2254,10 @@
 else
   ac_file=''
 fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
+$as_echo "$ac_file" >&6; }
 if test -z "$ac_file"; then :
-  { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
-$as_echo "$as_me: failed program was:" >&5
+  $as_echo "$as_me: failed program was:" >&5
 sed 's/^/| /' conftest.$ac_ext >&5
 
 { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
@@ -2266,18 +2265,51 @@
 { as_fn_set_status 77
 as_fn_error "C++ compiler cannot create executables
 See \`config.log' for more details." "$LINENO" 5; }; }
-else
-  { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
 fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for C++ compiler default output file name" >&5
-$as_echo_n "checking for C++ compiler default output file name... " >&6; }
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
-$as_echo "$ac_file" >&6; }
 ac_exeext=$ac_cv_exeext
 
-rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out
+# Check that the compiler produces executables we can run.  If not, either
+# the compiler is broken, or we cross compile.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C++ compiler works" >&5
+$as_echo_n "checking whether the C++ compiler works... " >&6; }
+# If not cross compiling, check that we can run a simple program.
+if test "$cross_compiling" != yes; then
+  if { ac_try='./$ac_file'
+  { { case "(($ac_try" in
+  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+  *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+  (eval "$ac_try") 2>&5
+  ac_status=$?
+  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+  test $ac_status = 0; }; }; then
+    cross_compiling=no
+  else
+    if test "$cross_compiling" = maybe; then
+	cross_compiling=yes
+    else
+	{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error "cannot run C++ compiled programs.
+If you meant to cross compile, use \`--host'.
+See \`config.log' for more details." "$LINENO" 5; }
+    fi
+  fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
+
+rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out conftest.out
 ac_clean_files=$ac_clean_files_save
+# Check that the compiler produces executables we can run.  If not, either
+# the compiler is broken, or we cross compile.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
+$as_echo_n "checking whether we are cross compiling... " >&6; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
+$as_echo "$cross_compiling" >&6; }
+
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of executables" >&5
 $as_echo_n "checking for suffix of executables... " >&6; }
 if { { ac_try="$ac_link"
@@ -2310,72 +2342,13 @@
 as_fn_error "cannot compute suffix of executables: cannot compile and link
 See \`config.log' for more details." "$LINENO" 5; }
 fi
-rm -f conftest conftest$ac_cv_exeext
+rm -f conftest$ac_cv_exeext
 { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_exeext" >&5
 $as_echo "$ac_cv_exeext" >&6; }
 
 rm -f conftest.$ac_ext
 EXEEXT=$ac_cv_exeext
 ac_exeext=$EXEEXT
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h.  */
-#include <stdio.h>
-int
-main ()
-{
-FILE *f = fopen ("conftest.out", "w");
- return ferror (f) || fclose (f) != 0;
-
-  ;
-  return 0;
-}
-_ACEOF
-ac_clean_files="$ac_clean_files conftest.out"
-# Check that the compiler produces executables we can run.  If not, either
-# the compiler is broken, or we cross compile.
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
-$as_echo_n "checking whether we are cross compiling... " >&6; }
-if test "$cross_compiling" != yes; then
-  { { ac_try="$ac_link"
-case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
-$as_echo "$ac_try_echo"; } >&5
-  (eval "$ac_link") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
-  test $ac_status = 0; }
-  if { ac_try='./conftest$ac_cv_exeext'
-  { { case "(($ac_try" in
-  *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
-  *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
-$as_echo "$ac_try_echo"; } >&5
-  (eval "$ac_try") 2>&5
-  ac_status=$?
-  $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
-  test $ac_status = 0; }; }; then
-    cross_compiling=no
-  else
-    if test "$cross_compiling" = maybe; then
-	cross_compiling=yes
-    else
-	{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error "cannot run C++ compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." "$LINENO" 5; }
-    fi
-  fi
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
-$as_echo "$cross_compiling" >&6; }
-
-rm -f conftest.$ac_ext conftest$ac_cv_exeext conftest.out
-ac_clean_files=$ac_clean_files_save
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of object files" >&5
 $as_echo_n "checking for suffix of object files... " >&6; }
 if test "${ac_cv_objext+set}" = set; then :
@@ -3006,8 +2979,8 @@
 ... rest of stderr output deleted ...
          10q' conftest.err >conftest.er1
     cat conftest.er1 >&5
+    rm -f conftest.er1 conftest.err
   fi
-  rm -f conftest.er1 conftest.err
   $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
   test $ac_status = 0; }
 done
@@ -3354,8 +3327,8 @@
 ... rest of stderr output deleted ...
          10q' conftest.err >conftest.er1
     cat conftest.er1 >&5
+    rm -f conftest.er1 conftest.err
   fi
-  rm -f conftest.er1 conftest.err
   $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
   test $ac_status = 0; }
 done
@@ -3959,9 +3932,9 @@
 ## now use all these
 PKG_CPPFLAGS="${PKG_CPPFLAGS} $rcpp_cxxflags"
 
-PKG_LIBS="${PKG_LIBS} $rcpp_ldflags"
+PKG_LIBS="${PKG_LIBS} $rcpp_ldflags -larmadillo -lpthread"
 
-ARMA_HAS_CUBE="$arma_version070"
+ARMA_VERSION_GE_070="$arma_version070"
 
 ARMA_VERSION_GE_090="$arma_version090"
 
@@ -4509,7 +4482,7 @@
 # values after options handling.
 ac_log="
 This file was extended by RcppArmadillo $as_me 0.1.0, which was
-generated by GNU Autoconf 2.65.  Invocation command line was
+generated by GNU Autoconf 2.64.  Invocation command line was
 
   CONFIG_FILES    = $CONFIG_FILES
   CONFIG_HEADERS  = $CONFIG_HEADERS
@@ -4544,7 +4517,6 @@
 
   -h, --help       print this help, then exit
   -V, --version    print version number and configuration settings, then exit
-      --config     print configuration, then exit
   -q, --quiet, --silent
                    do not print progress messages
   -d, --debug      don't remove temporary files
@@ -4559,11 +4531,10 @@
 
 _ACEOF
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
-ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
 ac_cs_version="\\
 RcppArmadillo config.status 0.1.0
-configured by $0, generated by GNU Autoconf 2.65,
-  with options \\"\$ac_cs_config\\"
+configured by $0, generated by GNU Autoconf 2.64,
+  with options \\"`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`\\"
 
 Copyright (C) 2009 Free Software Foundation, Inc.
 This config.status script is free software; the Free Software Foundation
@@ -4598,8 +4569,6 @@
     ac_cs_recheck=: ;;
   --version | --versio | --versi | --vers | --ver | --ve | --v | -V )
     $as_echo "$ac_cs_version"; exit ;;
-  --config | --confi | --conf | --con | --co | --c )
-    $as_echo "$ac_cs_config"; exit ;;
   --debug | --debu | --deb | --de | --d | -d )
     debug=: ;;
   --file | --fil | --fi | --f )
@@ -4768,7 +4737,7 @@
 t delim
 :nl
 h
-s/\(.\{148\}\)..*/\1/
+s/\(.\{148\}\).*/\1/
 t more1
 s/["\\]/\\&/g; s/^/"/; s/$/\\n"\\/
 p
@@ -4782,7 +4751,7 @@
 t nl
 :delim
 h
-s/\(.\{148\}\)..*/\1/
+s/\(.\{148\}\).*/\1/
 t more2
 s/["\\]/\\&/g; s/^/"/; s/$/"/
 p

Modified: pkg/RcppArmadillo/configure.in
===================================================================
--- pkg/RcppArmadillo/configure.in	2010-03-02 13:31:33 UTC (rev 820)
+++ pkg/RcppArmadillo/configure.in	2010-03-02 15:34:38 UTC (rev 821)
@@ -110,8 +110,8 @@
 
 ## now use all these
 AC_SUBST([PKG_CPPFLAGS],["${PKG_CPPFLAGS} $rcpp_cxxflags"])
-AC_SUBST([PKG_LIBS],["${PKG_LIBS} $rcpp_ldflags"])
-AC_SUBST([ARMA_HAS_CUBE],["$arma_version070"])
+AC_SUBST([PKG_LIBS],["${PKG_LIBS} $rcpp_ldflags -larmadillo -lpthread"])
+AC_SUBST([ARMA_VERSION_GE_070],["$arma_version070"])
 AC_SUBST([ARMA_VERSION_GE_090],["$arma_version090"])
 AC_CONFIG_FILES([src/Makevars inst/include/RcppArmadilloDefines.h])
 AC_OUTPUT



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