[R-gregmisc-commits] r2191 - in pkg/gtools: . inst
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Thu Jun 21 19:09:49 CEST 2018
Author: warnes
Date: 2018-06-21 19:09:49 +0200 (Thu, 21 Jun 2018)
New Revision: 2191
Added:
pkg/gtools/.Rbuildignore
pkg/gtools/ChangeLog
pkg/gtools/NEWS
Removed:
pkg/gtools/inst/ChangeLog
pkg/gtools/inst/NEWS
Log:
Move NEWS and ChangeLog to top level directory
Added: pkg/gtools/.Rbuildignore
===================================================================
--- pkg/gtools/.Rbuildignore (rev 0)
+++ pkg/gtools/.Rbuildignore 2018-06-21 17:09:49 UTC (rev 2191)
@@ -0,0 +1,3 @@
+^revdep
+^.*\.Rproj$
+^\.Rproj\.user$
Copied: pkg/gtools/ChangeLog (from rev 2190, pkg/gtools/inst/ChangeLog)
===================================================================
--- pkg/gtools/ChangeLog (rev 0)
+++ pkg/gtools/ChangeLog 2018-06-21 17:09:49 UTC (rev 2191)
@@ -0,0 +1,1059 @@
+2017-06-14 warnes
+
+ * [r2169] DESCRIPTION, NAMESPACE, R/checkRVersion.R,
+ R/newVersionAvailable.R, R/roman2int.R, R/setTCPNoDelay.R,
+ man/combinations.Rd, man/defmacro.Rd, src/gtools.h[ADD],
+ src/gtools_load.c[ADD], src/setTCPNoDelay.c,
+ tests/test_setTCPNoDelay.R: Explicitly register C routines used
+ by gtools
+
+2017-06-13 warnes
+
+ * [r2168] man/combinations.Rd, man/defmacro.Rd: Update R News URLS
+
+2017-06-12 warnes
+
+ * [r2165] man/capwords.Rd: Update link for taxise::taxize_capwords
+ in gtools::capwords man page
+
+ * [r2164] inst/ChangeLog: Fix typos
+
+ * [r2163] man/capwords.Rd: Update link for taxise::taxize_capwords
+ in gtools::capwords man page
+
+ * [r2162] DESCRIPTION, NAMESPACE, inst/ChangeLog, inst/NEWS: Update
+ meta files for gtools 3.7.0
+
+ * [r2161] tests/smartbind_emptynames.R: Fix test for smartbind with
+ empty column names
+
+ * [r2160] man/setTCPNoDelay.Rd, tests/test_setTCPNoDelay.R: Add
+ improved example to man page for setTCPnoDelat() and fix test
+ function.
+
+ * [r2159] man/ask.Rd: Add 'con' argument to ask() to allow
+ specification of the connection to query for input.
+
+ * [r2158] R/capwords.R, man/capwords.Rd: Add capwords() function to
+ apply standard capitalization rules to a scharacter string.
+
+2017-05-23 warnes
+
+ * [r2145] R/ask.R, R/quantcut.R, R/smartbind.R: - Integrate changes
+ made by Mango Solutions at
+ https://github.com/MangoTheCat/SASxport. - Remove functions
+ duplicated from the Hmisc package. - Minor code cleanup.
+
+2016-08-24 warnes
+
+ * [r2144] tests/test_setTCPNoDelay.R: Add more testing code.
+
+2016-08-15 warnes
+
+ * [r2143] inst/ChangeLog: Update ChangeLog
+
+ * [r2142] DESCRIPTION: Update version number and date
+
+ * [r2141] tests/test_setTCPNoDelay.R[ADD]: Add test code for
+ setTCPNoDelay
+
+ * [r2140] R/setTCPNoDelay.R: Modify setTCPNoDelay to work with
+ current socket objects
+
+ * [r2139] src/setTCPNoDelay.c: checkStatus() was not correctly
+ getting the error message.
+
+2016-04-22 warnes
+
+ * [r2127] NAMESPACE, R/capwords.R[ADD], man/capwords.Rd[ADD]: Add
+ capwords() function to properly capatilize strings for use in
+ titles
+
+ * [r2126] R/na.replace.R, man/na.replace.Rd: na.replace() now
+ accepts a function providing the replcement value.
+
+2015-11-24 warnes
+
+ * [r2071] R/smartbind.R: Correct error when column types don't
+ match (reported by
+
+2015-10-15 warnes
+
+ * [r2069] R/smartbind.R: smartbind() was not properly handling
+ columsn that were numeric on one df and character in the other
+ and other similar ctype conflicts. Fixed.
+
+2015-08-08 warnes
+
+ * [r2067] tests/smartbind_emptynames.R[ADD]: Add half-hearted test
+ file
+
+ * [r2066] R/smartbind.R: - Improve assignment of default names in
+ smartbind. - Disambiguate 'list' into an object named 'list' and
+ the function base::list() in smartbind().
+
+ * [r2065] DESCRIPTION, man/smartbind.Rd: Add example of using
+ 'list' argument to smartbind() man page.
+
+ * [r2064] R/smartbind.R, man/smartbind.Rd: - smartbind() gets a new
+ argument 'list' to pass a list of data frames, instead of/in
+ addition to data frames as arguments. - Fix bug in smartbind's
+ handling of factor levels.
+
+2015-07-14 warnes
+
+ * [r2057] R/loadedPackages.R, man/loadedPackages.Rd: Modify
+ loadedPackages() to return data silently so that the results
+ don't get printed twice.
+
+2015-05-27 warnes
+
+ * [r2049] data/badDend.rda[ADD], man/badDend.Rd[ADD],
+ man/unByteCode.Rd: Create local dataset to use in the example
+ code for unByteCode instead of relying on web access.
+
+ * [r2048] R/trimws.R: Fix missing closing paren.
+
+ * [r2047] R/keywords.R, R/roman2int.R, R/trim.R[DEL],
+ R/trimws.R[ADD]: Two functions in gtools need to use either
+ gdata::trim() or base::trimws() (added in R 3.2.0). The previous
+ solution was to include gdata/R/gdata/R/trim.R in gtools using a
+ symbolic link.
+
+ Unfortunately, Rforge doesn't seem to like the symbolic link when
+ building packages, and generates an error.
+
+ So, instead, create the file trimws.R, which creates trimws() if
+ it isn't already available (e.g. via base::trimws), and modify
+ keywords() and roman2int() to use trimws() instead of
+ gdata::trim().
+
+ * [r2046] man/roman2int.Rd[ADD]: Add man page for roman2int().
+
+ * [r2045] man/mixedsort.Rd: Remove extraneous closing paren.
+
+ * [r2044] NAMESPACE: Add roman2int() to exported function list.
+
+ * [r2043] R/asc.R: Looks like we also lost the change of argument
+ name to chr(). Fixed.
+
+ * [r2042] R/asc.R: Somehow lost 'simplify=TRUE' argument to asc.
+ Fixed.
+
+ * [r2041] DESCRIPTION: Update gtools version number to 3.5.0
+
+ * [r2040] DESCRIPTION, inst/ChangeLog, inst/NEWS: Update
+ DESCRIPTION, ChangeLog, NEWS
+
+ * [r2039] R/mixedsort.R, man/mixedsort.Rd: Add roman numeral
+ support to mixedorder() and mixedsort().
+
+ * [r2037] man/asc.Rd[ADD]: Add asc() and chr() functions for
+ converting between characters and ASCII codes
+
+ * [r2036] R/roman2int.R: roman2int() now returns NA for invalid
+ roman numeral strings instead of generating an error.
+
+ * [r2035] NAMESPACE: Add asc(), chr(), assignEdgewise(),
+ unByteCode(), and unByteCodeAssign() to package NAMESPACE.
+
+ * [r2034] R/asc.R[ADD]: Add asc() and chr() functions for
+ converting between characters and ASCII codes
+
+2015-05-26 warnes
+
+ * [r2030] inst/ChangeLog[ADD]: Add changelog to svn repository
+
+2015-05-25 warnes
+
+ * [r2029] tests/test_ddirichlet.R: Add library call.
+
+ * [r2028] man/unByteCode.Rd: Fix typo and add documentation for
+ argument 'name'.
+
+ * [r2027] man/mixedsort.Rd: Fix typo.
+
+ * [r2026] man/mixedsort.Rd: Add description of blanklast argument,
+ fix typo.
+
+ * [r2025] man/quantcut.Rd: Change usage to match actual definition.
+
+ * [r2024] man/mixedsort.Rd: Note characters sorting ignores case.
+
+ * [r2023] man/mixedsort.Rd: Remove '...' from arglist to match
+ source code.
+
+ * [r2022] man/mixedsort.Rd: Replace unicode quotes with \code{..}.
+
+2015-05-23 warnes
+
+ * [r2021] tests/test_ddirichlet.R[ADD]: Add regression test
+ ddirichlet() bug for x[i]=0, alpha[i]=1: ddirichlet(x, alpha) was
+ returning NA rather than 0.
+
+ * [r2020] R/dirichlet.R: ddirichlet() was incorrectly returning NA
+ when x[i]=0 and alpha[i]=1. In this case, the one calculation
+ became (-Inf * 0), which R evaluates to NaN. The correction is to
+ detect this case and substitute -Inf instead of NaN.
+
+2015-05-08 warnes
+
+ * [r2019] R/mixedsort.R: Summary: Speed up mixedorder by moving
+ suppressWarnings outside of lapply loops. (Suggestion by Henrik
+ Bengtsson.)
+
+2015-05-02 warnes
+
+ * [r2018] Rename 'trunk' to 'pkg' for compatibility with R-forge
+
+ * [r2017] Minor layout change.
+
+ * [r2016] Remove stray 'svn' that was inserted into the code.
+
+ * [r2015] Add man page for unByteCode(), assignEdgeWise(), and
+ unByteCodeAssign()
+
+2015-04-28 warnes
+
+ * [r1976] Changes to mixedsort(): - Hands off objects that are not
+ character vectors to the default sort. - Add 'decreasing',
+ 'na.last', and 'blank.last' arguments.
+
+ * [r1975] Add private function 'checkReverseDependencies'.
+
+2015-04-23 warnes
+
+ * [r1950] Update NEWS and ChangeLog
+
+ * [r1949] - The 'q' argument to quantcut()'s 'q' now accept an
+ integer indicating the number of equally spaced quantile groups
+ to create. (Suggestion and patch submitted by Ryan C. Thompson.)
+
+ * [r1946] Revers accidental text deletion:
+
+ * [r1945] Update for gtools 3.4.3
+
+ * [r1944] Remove debugging code and stray browser() call
+
+2015-04-14 warnes
+
+ * [r1923] Fix typo
+
+2015-04-09 warnes
+
+ * [r1921] Update gtools ChangeLog
+
+ * [r1920] Move first()/last()/left()/right() to gdata. Add new
+ functions na.replace() and loadedPackages(). Add more text to
+ package description.
+
+2015-04-08 warnes
+
+ * [r1919] Move first/last/left/right to from gtools to gdata
+
+2015-04-06 warnes
+
+ * [r1918] Correct URL
+
+ * [r1917] Update NEWS and ChangeLog for gtools 3.5.0
+
+ * [r1916] Add ChangeLog files to repository
+
+ * [r1915] Implement fix to keywords() needed for R-3.4.1, as
+ suggested by Kurt Hornik.
+
+ * [r1914] - Export S3 methods for first(), last(), left() and
+ right(). - Ensure code matches man page for first(), last(),
+ left(), and right().
+
+2014-10-09 warnes
+
+ * [r1897] Update for 3.5.0 release of gtools
+
+ * [r1896] Make right() and left() S3 methods for classes data.frame
+ and matrix
+
+2014-08-27 warnes
+
+ * [r1872] Fix man page
+
+ * [r1871] Finish adding first(), last(), left(), and right().
+
+ * [r1870] Add functions first(), last(), left(), and right().
+
+2014-05-28 warnes
+
+ * [r1816] Update for gtools 3.4.1
+
+ * [r1815] Add test to ensure smartbind() properly handles Date
+ columns.
+
+ * [r1814] smartbind: Convert non-native type columns (except
+ factor) to character.
+
+2014-04-18 arnima
+
+ * [r1813] Main arg is 'x' like showNonASCII(x), preformatted notes
+ instead of verb
+
+2014-04-17 warnes
+
+ * [r1810] Update ASCIIfy man page to match source code and add
+ keywords
+
+ * [r1809] Update NEWS for gtools 3.4.0
+
+ * [r1808] Add ASCIIfy function posted to RDevel by Arni Magnusson
+
+2014-03-01 warnes
+
+ * [r1776] Fix cut-and-paste error.
+
+ * [r1775] Update files for gtools 3.3.1 release
+
+ * [r1774] Fix bug in gtools::mixedorder regular expression for
+ regognizing numbers. (Periods weren't escaped).
+
+2014-02-11 warnes
+
+ * [r1773] Create and use locate copy of tools:::.split_op_version.
+
+ * [r1772] Update for gtools 3.3.0.
+
+ * [r1771] Fix arguments
+
+ * [r1770] Update arguments to match code.
+
+ * [r1769] Add getDependencies() function to return a list of
+ package dependencies.
+
+2014-01-14 warnes
+
+ * [r1768] Update for bug-fix release
+
+ * [r1767] Add test file for binsearch() function.
+
+ * [r1766] Fixed bug where binsearch() returned the wrong endpoint &
+ value when the found value was at the upper endpoint.
+
+2014-01-13 warnes
+
+ * [r1765] Fix typo
+
+2014-01-11 warnes
+
+ * [r1764] Update for gtools release 3.2.0
+
+ * [r1763] fixes for R CMD check
+
+ * [r1762] Fixes for gtools release 3.2.0
+
+2013-12-23 warnes
+
+ * [r1761] Extend the keywords() function to return keywords
+ associated with a specified topic via 'keywords(topic)'.
+
+ * [r1760] Add keyword.
+
+ * [r1759] Add stars.pval() function to convert p-values into
+ significance symbols.
+
+2013-11-26 warnes
+
+ * [r1748] mixedorder() was failing to correctly handle numbers
+ including decimals due to a faulty regular expression. Prior to
+ the fix:
+
+ > drr [1] "Dose 0.3 mg" "Dose 0.04 mg" "Dose 0.5 mg" >
+ gtools::mixedsort(drr) [1] "Dose 0.3 mg" "Dose 0.04 mg" "Dose 0.5
+ mg" After the fix:
+
+ > drr [1] "Dose 0.3 mg" "Dose 0.04 mg" "Dose 0.5 mg" >
+ mixedsort(drr) [1] "Dose 0.04 mg" "Dose 0.3 mg" "Dose 0.5 mg"
+
+ In addition, an optimization was added that checked if the input
+ vector was numeric. If so, simply use the existing base::order
+ function.
+
+2013-11-18 warnes
+
+ * [r1747] Use ".Deprecated" instead of warning.
+
+2013-11-06 warnes
+
+ * [r1746] Update files for gtools 3.1.1
+
+ * [r1745] Fix problem with mixedorder/mixedsort when there is only
+ zero or one elements in the vector.
+
+2013-09-23 warnes
+
+ * [r1716] Comment out empty sections in gtools-deprecated.Rd
+
+ * [r1715] Update files for gtools 3.1.0 release
+
+ * [r1714] Make 'addLast()' defunct.
+
+ * [r1713] Mark 'addLast()' as defunct and move 'lastAdd()' function
+ to a separate file.
+
+ * [r1712] Update for gtools 3.0.1 release
+
+ * [r1711] Use 'suppressWarnings() instead of 'options(warn=-1)' in
+ 'mixedorder()'.
+
+2013-07-07 warnes
+
+ * [r1705] Fix typo.
+
+2013-07-06 warnes
+
+ * [r1704] Fix Rd warning.
+
+ * [r1703] Include lastAdd in NAMESPACE
+
+ * [r1702] Change assert from deprecated to defunct.
+
+ * [r1701] Improve deprecation message
+
+ * [r1700] Update for gtools 3.0.0
+
+ * [r1699] Create new function lastAdd to replace addLast and mark
+ addLast as deprecated.
+
+2013-07-05 warnes
+
+ * [r1698] Point out that addLast() modifies the value of .Last in
+ the global environment.
+
+ * [r1697] Point out that addLast() modifies the value of .Last in
+ the global environment.
+
+ * [r1696] Update for gtools 2.7.2 mark 2
+
+ * [r1695] Remove cross-reference to (obsolete?) moc package
+
+ * [r1694] Update for gtools 2.7.2
+
+ * [r1693] Update for R version 3.0.0 and later
+
+2013-03-17 warnes
+
+ * [r1640] Fix error in smartbind: factor levels were not being
+ handled if the factor column was not present in the first data
+ frame.
+
+2012-06-19 warnes
+
+ * [r1570] Update for gtools 2.7.0.
+
+ * [r1569] Document new 'verbose' argument to smartbind().
+
+ * [r1568] Clean up R CMD check warnings.
+
+2012-05-04 warnes
+
+ * [r1529] smartbind(): Improve handling of factors and ordered
+ factors.
+
+2011-10-05 warnes
+
+ * [r1518] Update version number for release
+
+ * [r1517] Add 'sep' argument to smartbind() to allow specification
+ of character used to separate components of constructed names
+
+2011-09-28 warnes
+
+ * [r1513] smartbind(): Prevent coersion to data frame from mangling
+ column names.
+
+ * [r1512] Add 'fill' argument to smartbind() to specify a value to
+ use for missing entries.
+
+ * [r1511] Add 'fill' argument to smartbind() to specify a value to
+ use for missing entries.
+
+2010-08-14 warnes
+
+ * [r1451] Modify mixedorder()/mixedsort() to better handle strings
+ containing multiple periods, like version numbers (e.g 1.1.2,
+ 1.2.1. 1.1.1.1).
+
+2010-05-01 warnes
+
+ * [r1434] Update version number for new release
+
+ * [r1433] Change Greg's email address to greg at warnes.net
+
+ * [r1432] Fix error in checkRVersion()
+
+2010-04-28 ggrothendieck2
+
+ * [r1431] fixed problems with R CMD CHECK
+
+2009-05-09 warnes
+
+ * [r1328] Escape $ in .Rd file to avoid latex issues
+
+ * [r1327] Update NEWS and create softlinks for NEWS and ChangeLog
+ in top level directory
+
+ * [r1326] Move actual NEWS file into inst.
+
+ * [r1325] Update Greg's email address and fix Rd syntax errors
+
+2009-02-16 warnes
+
+ * [r1313] Correct windows make flags as suggested by Brian Ripley.
+
+2008-08-15 warnes
+
+ * [r1303] Add keywords() function to show /doc/KEYWORDS file
+
+2008-05-29 warnes
+
+ * [r1285] Add newVersionAvailable() function to compare running and
+ latest available R versions
+
+2008-05-26 warnes
+
+ * [r1284] Update license specification
+
+ * [r1283] Remove 'assert' man page
+
+2008-05-22 warnes
+
+ * [r1282] Finish rename of assert.R to assert-depricated.Rd
+
+ * [r1281] Add checkRVersion.R file
+
+ * [r1280] Rename again to get correct extension!
+
+ * [r1279] Update NEWS for 2.5.0
+
+ * [r1278] Add man page for checkRVersion
+
+ * [r1277] Rename assert-deprecated.R to assert.R to meet R file
+ name requirements.
+
+ * [r1276] Add checkRVersion to NAMESPACE, and increment version in
+ DESCRIPTION.
+
+ * [r1275] Remove broken SEE LSO reference
+
+2008-04-12 warnes
+
+ * [r1259] Improve text explanation of how defmacro() and strmacro()
+ differ from function().
+
+ * [r1258] assert() is now deprecated in favor of base::stopifnot()
+
+ * [r1257] Rename 'assert.R' to 'deprecated.R'.
+
+ * [r1256] Assert is now deprecated in favor of base::stopifnot(),
+ so add call to .Deprecated() to inform the user.
+
+2007-11-30 warnes
+
+ * [r1228] Update defnitions of odd() and even() to use modulus
+ operator instead of division. Prettier, I think, :-D
+
+2007-08-08 warnes
+
+ * [r1121] Fix bug identified by R-2.6's check routings in
+ binsearch()
+
+ * [r1120] Add the binsearch(), previously in the genetics package.
+
+2007-07-18 ggorjan
+
+ * [r1100] typo fixed
+
+2007-04-12 warnes
+
+ * [r1088] Add ask() function to prompt the user and collect a
+ single response.
+
+2007-04-07 warnes
+
+ * [r1087] Fix improper escapes in regexp detected by R 2.5.0
+ package check.
+
+2007-03-23 warnes
+
+ * [r1083] Allow permutations for r>n provided repeats.allowed=TRUE
+
+2006-11-28 warnes
+
+ * [r1023] Replace F with FALSE in smartbind example.
+
+2006-11-27 warnes
+
+ * [r1022] Replace T with TRUE in smartbind example
+
+ * [r1021] Temprary remove to reset binary flag
+
+ * [r1020] Temprary remove to reset binary flag
+
+ * [r1019] Add smartbind() to list of exported functions, and add
+ corresponding documentation file.
+
+ * [r1018] Update my email address
+
+2006-11-14 ggorjan
+
+ * [r1012] Removed executable property
+
+2006-08-02 warnes
+
+ * [r977] Update my email address
+
+2006-05-05 nj7w
+
+ * [r958] Fixed minor typo - in {value} - n was replaced by r
+
+ * [r957] Fixed minor typos
+
+2006-03-01 warnes
+
+ * [r903] Add smartbind function
+
+2006-01-18 warnes
+
+ * [r845] Add concept tags to make mixedsort easier to locate.
+
+2005-12-21 warnes
+
+ * [r837] Update version number and date
+
+ * [r836] Note changes for 2.2.3
+
+ * [r835] Should now work on Windows
+
+2005-12-20 warnes
+
+ * [r834] Temporary fix to allow setTCPNoDelay.c to compile on
+ Windows. If compiled on windows calling setTCPNoDelay will just
+ raise an error.
+
+2005-12-14 warnes
+
+ * [r813] Change C++ comment to standard comment
+
+2005-12-13 nj7w
+
+ * [r810] *** empty log message ***
+
+ * [r809] Updated NEWS and removed ChangeLog
+
+2005-12-12 nj7w
+
+ * [r800] Updated version for CRAN release
+
+2005-12-08 warnes
+
+ * [r790] Add C source code for setTCPNoDelay.
+
+2005-12-01 nj7w
+
+ * [r776] Updated Greg's email address
+
+2005-11-29 warnes
+
+ * [r769] Add UseDynLib to NAMESPACE so the shared library gets
+ properly loaded.
+
+ * [r768] - Remove debugging comments - Change return value on
+ success to "Success".
+
+2005-11-22 warnes
+
+ * [r758] NAMESPACE
+
+ * [r757] Update news for 2.2.1 release.
+
+ * [r756] Fixes for R CMD check
+
+ * [r755] Add setTCPNoDelay() function and documentation
+
+ * [r745] New function 'addLast' that adds functions to R's .Last()
+ so that they will be executed when R is terminating.
+
+2005-09-22 warnes
+
+ * [r678] More changes for strmacro(), also changes for 2.1.1
+ release
+
+ * [r677] Add strmaco() which defines functions that use strings for
+ macro definition
+
+2005-09-21 warnes
+
+ * [r676] Add support for DOTS/... arguments to defmacro
+
+2005-09-12 nj7w
+
+ * [r671] Updated Greg's email
+
+2005-09-02 nj7w
+
+ * [r653] Exported assert
+
+ * [r652] Updated the version number
+
+ * [r651] Added NEWS
+
+ * [r650] Added ChangeLog
+
+ * [r649] Fixed syntax errors
+
+2005-09-02 warnes
+
+ * [r648] Add assert() and documentation
+
+ * [r647] Fix problem in defmacro.Rd file: don't use \code{} in the
+ example section.
+
+2005-08-31 warnes
+
+ * [r645] Adding the defmacro() function, extracted from
+
+ Lumley T. "Programmer's Niche: Macros in {R}", R News, 2001, Vol
+ 1, No. 3, pp 11--13, \url{http://CRAN.R-project.org/doc/Rnews/}
+
+ * [r642] Add stand-alone DESCRIPTION file and remove old
+ DESCRIPTION.in file.
+
+2005-06-13 nj7w
+
+ * [r626] Fixed a bug in mixedsort - check if "which.na" and
+ "which.blank" is numeric(0) before subsetting the datasets.
+
+2005-06-09 nj7w
+
+ * [r625] Updating the version number, and various help files to
+ synchronize splitting of gregmisc bundle in 4 individual
+ components.
+
+2005-05-10 warnes
+
+ * [r619] Fix handling of NA's in mixedorder. We were using a high
+ UTF character to try to put NA's at the end of the sort order,
+ but R 2.1.0 checks if characters are in the correct range.
+ Instead, we explicitly force NA's to the end.
+
+2005-04-07 warnes
+
+ * [r606] - Add scat() function which writes its arguments to stderr
+ and flushes so that output is immediately displayed, but only if
+ 'getOption("DEBUG")' is true.
+
+2005-04-02 warnes
+
+ * [r600] Move drop.levels() from gtools to gdata.
+
+ * [r599] Minor reordering of functions in file
+
+ * [r598] Move frameApply() to gdata package.
+
+ * [r597] Fix error if only one value passed to mixedorder.
+
+ * [r596] Add proper handling where more than one quantile obtains
+ the same value
+
+2005-04-01 warnes
+
+ * [r595] Add CVS ID tag to file headers.
+
+ * [r594] Fixes from Jim Rogers for R CMD check problems in
+ frameApply
+
+2005-03-31 warnes
+
+ * [r591] Updates to drop.levels() and frameApply() from Jim Rogers
+
+ * [r590] Add ELISA data set used by frameApply and drop.levels
+ examples
+
+2005-02-25 warnes
+
+ * [r562] Replace 'T' with TRUE.
+
+ * [r561] Remove dependency on ELISA data set for the example.
+
+ * [r558] Add drop.levels, frameApply to namespace export.
+
+2005-02-15 warnes
+
+ * [r542] Add frameApply and drop.levels contributed by Jim Rogers.
+
+2005-01-12 warnes
+
+ * [r515] Add dependency on R 1.9.0+ to prevent poeple from
+ installing on old versions of R which don't support namespaces.
+
+2004-09-27 warneg
+
+ * [r461] Updated to pass R CMD check.
+
+2004-09-03 warneg
+
+ * [r446] initial bundle checkin
+
+2004-09-02 warneg
+
+ * [r442] Initial revision
+
+2004-08-27 warnes
+
+ * [r441] Fixed bug in mixedsort, and modified reorder.factor to use
+ mixedsort.
+
+2004-08-26 warnes
+
+ * [r440] - Fix bug pointed out by Jim Rogers. - Use a more
+ distictive internal separator: $@$ instead of just $ -
+ Capitalization is now irrelevent for search order (unlike ASCII).
+
+2004-06-08 warnes
+
+ * [r372] Nitin Jain added by= parameter to allow specifying
+ separation between groups.
+
+2004-05-26 warnes
+
+ * [r345] Escape underscores in email addresses so Latex is happy.
+
+ * [r343] Replace 'T' with 'TRUE' to pass R CMD check.
+
+2004-05-25 warnes
+
+ * [r334] Remove extraneous comments.
+
+ * [r333] Fix an error in the code when using repeats.allow=T and
+ r>2. Bug report and fix both due to Elizabeth Purdom
+ <epurdom at stanford.edu>.
+
+2004-05-24 warnes
+
+ * [r323] Check if argument is a vector before doing is.na to avoid
+ generating a warning.
+
+ * [r322] Add invalid() function for testing if a parameter value is
+ non-missing, non-NA, non-NULL.
+
+2004-04-27 warnes
+
+ * [r321] Replaced argument `as.list' with `simplify'. Updated
+ documentation, and updated examples appropriately.
+
+2004-04-26 warnes
+
+ * [r320] Added as.list argument to return one list element per
+ evaluation.
+
+2004-03-26 warnes
+
+ * [r303] Uncomment and fix large 'n' example.
+
+ * [r301] - Update to match changes in running() - Add examples to
+ illustrate new arguments. - Modify running correlation plot
+ example to be more clear.
+
+ * [r299] More of the same.
+
+ * [r297] Fix bug discovered by Sean Davis <sdavis2 at mail.nih.gov>.
+ The running function took an improper shortcut. When
+ allow.fewer=FALSE it was still passing shorter lists of elements
+ to the called function, and then overwriting the results for the
+ shorter lists with NAs. The code now skips evaluation of the
+ function on lists shorter than the specified length when
+ allow.fewer=FALSE.
+
+2004-01-21 warnes
+
+ * [r277] - Mark sprint() as depreciated. - Replace references to
+ sprint with capture.output() - Use match.arg for halign and
+ valign arguments to textplot.default. - Fix textplot.character so
+ that a vector of characters is properly displayed. Previouslt,
+ character vectors were plotted on top of each other.
+
+2003-12-03 warnes
+
+ * [r253] - match function argument defaults with 'usage'
+
+2003-11-21 warnes
+
+ * [r237] Removed 'deqn' call that was confusing things.
+
+ * [r234] Add email address to author field
+
+ * [r233] - new files
+
+ * [r232] - Change 'T' to 'TRUE' in mixedsort.R - Add missing brace
+ in mixedsort.Rd
+
+2003-11-20 warnes
+
+ * [r230] - Move 'odd' and 'even' functions to a separate file &
+ provide documentation
+
+2003-11-18 warnes
+
+ * [r227] - Renamed smartsort to mixedsort and added documentation.
+
+2003-11-10 warnes
+
+ * [r220] - Add files contributed by Arni Magnusson
+ <arnima at u.washington.edu>. As well as some of my own.
+
+2003-05-23 warnes
+
+ * [r196] - library() backported from 1.7-devel. This version of the
+ function adds the "pos=" argument to specify where in the search
+ path the library should be placed.
+
+ - updated .First.lib to use library(...pos=3) for MASS to avoid
+ the 'genotype' data set in MASS from masking the genotype
+ funciton in genetics when it loads gregmisc
+
+ - Added logit() inv.logit() matchcols() function and
+ corresponding docs
+
+2003-04-22 warnes
+
+ * [r189] - Fixed tpyo in example that allowed combinations(500,2)
+ to run when it should have been ignred for testing..
+
+2003-04-10 warnes
+
+ * [r186] - Added note about the need to increase
+ options("expressions") to use large values for 'n'. Prompted by
+ bug report from Huan Huang <huan.huang at bnpparibas.com
+
+2003-04-04 warnes
+
+ * [r183] - Replace 'T' with 'TRUE'
+
+ * [r182] - Change occurences of 'T' to 'TRUE'
+
+ * [r181] - Allow optional arguments to sprint to be passed to print
+ - Fix R CMD check errors
+
+ * [r180] - Allow optional arguments to sprint to be passed to print
+
+2003-04-03 warnes
+
+ * [r177] - Had mistyped 'sprint' as 'sprintf'.
+
+ * [r176] - Add help file for capture and sprintf.
+
+2003-04-02 warnes
+
+ * [r174] - Added file 'capture.R' containing capture() and
+ sprint().
+
+2003-03-07 warnes
+
+ * [r168] - Minor changes to code to allow the package to be
+ provided as an S-Plus chapter.
+
+2003-01-30 warnes
+
+ * [r161] - Fixed typo in email address.
+
+2003-01-02 warnes
+
+ * [r148] - Add nlevels function.
+
+2002-10-11 warnes
+
+ * [r133] - Add permute() function (wraper for sample) and man page
+
+ * [r132] - Escaped underscores in my email address that was causing
+ a parse error in the {r,p}dirichlet man page.
+
+2002-09-30 warnes
+
+ * [r128] - Added rdirichlet() and ddirichlet() with accompaning
+ help page and tests.
+
+2002-09-24 warnes
+
+ * [r122] - Fixed error where running was always calling running2
+ with 'fun=mean', ignoring the specified funtion.
+
+2002-09-23 warnes
+
+ * [r117] - Modified all files to include CVS Id and Log tags.
+
+ * [r116] - Added CrossTable() and barplot2() code and docs
+ contributed by Marc Schwartz. - Permit combinations() to be used
+ when r>n provided repeat.allowed=TRUE - Bumped up version number
+
+2002-08-01 warnes
+
+ * [r114] - Corrected documentation mismatch for ci, ci.default.
+
+ - Replaced all occurences of '_' for assignment with '<-'.
+
+ - Replaced all occurences of 'T' or 'F' for 'TRUE' and 'FALSE'
+ with the spelled out version.
+
+ - Updaded version number and date.
+
+2002-04-09 warneg
+
+ * [r109] Checkin for version 0.5.3
+
+2002-03-26 warneg
+
+ * [r97] Initial Checkin
+
+ * [r96] Initial checkin.
+
+2002-03-20 warneg
+
+ * [r91] - Added definition of is.R function.
+
+ - Added boxplot.formula
+
+2002-03-07 warneg
+
+ * [r90] - Added documentation and example for running2
+
+ * [r89] - Added "running2", which handles both univariate and
+ bivariate cases - Modified "running" to call "running2"
+
+2002-02-05 warneg
+
+ * [r75] - Fix typo that caused code meant to run only under S-Plus
+ to run under R, causing problems.
+
+2001-12-19 warneg
+
+ * [r67] - Added code for %in%.
+
+2001-09-18 warneg
+
+ * [r18] Release 0.3.2
+
+2001-09-01 warneg
+
+ * [r17] Initial checkin.
+
+ * [r16] Release 0.3.0
+
+2001-08-25 warneg
+
+ * [r13] Initial CVS checkin.
+
+ * [r11] Fixed a typo and a syntax error.
+
+ * [r7] Initial Checkin
+
+2001-06-29 warneg
+
+ * [r6] Initial revision.
+
Copied: pkg/gtools/NEWS (from rev 2190, pkg/gtools/inst/NEWS)
===================================================================
--- pkg/gtools/NEWS (rev 0)
+++ pkg/gtools/NEWS 2018-06-21 17:09:49 UTC (rev 2191)
@@ -0,0 +1,369 @@
+gtools 3.7.0 - 2017-06-14
+-------------------------
+
+New functions:
+
+- Add capwords() function to apply standard capitalization rules
+ to a character string.
+
+Enhancements:
+
+- Add 'con' argument to ask() to allow specification of the
+ connection to query for input. For use under RStudio, use
+ ask(..., con=file('stdin')).
+
+- R/na.replace.R, man/na.replace.Rd: na.replace() now
+ accepts a function to provide the replcement value.
+
+- smartbind() has a new argument 'list' to pass a list of data frames,
+ /instead of/in addition to/ data frames as arguments.
+
+- Internal changes to bring code up to current CRAN guidelines.
+
+Bug Fixes:
+
+- smartbind() now works properly with empty column names
+
+- Correct error in smartbind() when column types don't
+ match.
+
+- Fix bug in smartbind's handling of factor levels.
+
+- Improve assignment of default names in smartbind().
+
+- loadedPackages() to return data silently so that the results
+ don't get printed twice.
+
+
+gtools 3.5.0 - 2015-04-28
+-------------------------
+
+New Functions:
+
+- New roman2int() functon to convert roman numerals to integers
+ without the range restriction of utils::as.roman().
+
+- New asc() and chr() functions to convert between ASCII codes and
+ characters. (Based on the 'Data Debrief' blog entry for 2011-03-09
+ at http://datadebrief.blogspot.com/2011/03/ascii-code-table-in-r.html).
+
+- New unByteCode() and unByteCodeAssign() functions to convert a
+ byte-code functon to an interpeted code function.
+
+- New assignEdgewise() function for making assignments into locked
+ environments. (Used by unByteCodeAssign().)
+
+Enhancements:
+
+- mixedsort() and mixedorder() now have arguments 'decreasing',
+ 'na.last', and 'blank.last' arguments to control sort ordering.
+
+- mixedsort() and mixedirdeR() now support Roman numerals via the
+ arguments 'numeric.type', and 'roman.case'. (Request by David
+ Winsemius, suggested code changes by Henrik Bengtsson.)
+
+- speed up mixedorder() (and hence mixedsort()) by moving
+ suppressWarnings() outside of lapply loops. (Suggestion by Henrik
+ Bengtsson.)
+
+- The 'q' argument to quantcut() now accept an integer
+ indicating the number of equally spaced quantile groups to
+ create. (Suggestion and patch submitted by Ryan C. Thompson.)
+
+Bug fixes:
+
+- Removed stray browser() call in smartbind().
+
+- ddirichlet(x, alpha) was incorrectly returning NA when for any i,
+ x[i]=0 and alpha[i]=1. (Bug report by John Nolan.)
+
+Other changes:
+
+- Correct typographical errors in package description.
+
+
+gtools 3.4.2 - 2015-04-06
+-------------------------
+
+New features:
+
+- New function loadedPackages() to display name, version, and path of
+ loaded packages (package namespaces).
+
+- New function: na.replace() to replace missing values within a
+ vector with a specified value.`
+
+Bug fixes:
+
+- Modify keywords() to work properly in R 3.4.X and later.
+
+
+gtools 3.4.1 - 2014-05-27
+-------------------------
+
+Bug fixes:
+
+- smartbind() now converts all non-atomic type columns (except factor)
+ to type character instead of generating an opaque error message.
+
+Other changes:
+
+- the argument to ASCIIfy() is now named 'x' instead of 'string'.
+
+- minor formatting changes to ASCIIfy() man page.
+
+gtools 3.4.0 - 2014-04-14
+-------------------------
+
+New features:
+
+- New ASCIIfy() function to converts character vectors to ASCII
+ representation by escaping them as \x00 or \u0000 codes.
+ Contributed by Arni Magnusson.
+
+
+gtools 3.3.1 - 2014-03-01
+-------------------------
+
+Bug fixes:
+
+- 'mixedorder' (and hence 'mixedsort') not properly handling
+ single-character strings between numbers, so that '1a2' was being
+ handled as a single string rather than being properly handled as
+ c('1', 'a', '2').
+
+
+
+gtools 3.3.0 - 2014-02-11
+-------------------------
+
+New features:
+
+- Add the getDependencies() function to return a list of dependencies
+ for the specified package(s). Includes arguments to control whether
+ these dependencies should be constructed using information from
+ locally installed packages ('installed', default is TRUE), avilable
+ CRAN packages ('available', default is TRUE) and whether to include
+ base ('base', default=FALSE) and recommended ('recommended', default
+ is FALSE) packages.
+
+Bug fixes:
+
+- binsearch() was returning the wrong endpoint & value when the found
+ value was at the upper endpoint.
+
+gtools 3.2.1 - 2014-01-13
+-------------------------
+
+Bug fixes:
+
+- Resolve circular dependency with gdata
+
+
+gtools 3.2.0 - 2014-01-11
+-------------------------
+
+New features:
+
+- The keywords() function now accepts a function or function name as
+ an argument and will return the list of keywords associated with the
+ named function.
+
+- New function stars.pval() which will generate p-value significance
+ symbols ('***', '**', etc.)
+
+Bug fixes:
+
+- R/mixedsort.R: mixedorder() was failing to correctly handle numbers
+ including decimals due to a faulty regular expression.
+
+Other changes:
+
+- capture() and sprint() are now defunct.
+
+
+gtools 3.1.1 - 2013-11-06
+-------------------------
+
+Bug fixes:
+
+- Fix problem with mixedorder/mixedsort when there is zero or one
+ elements in the argument vector.
+
+
+gtools 3.1.0 - 2013-09-22
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/r-gregmisc -r 2191
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