[Qpcr-commits] r140 - in pkg/NormqPCR: data inst/exData man
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Thu Jun 30 16:42:31 CEST 2011
Author: jperkins
Date: 2011-06-30 16:42:30 +0200 (Thu, 30 Jun 2011)
New Revision: 140
Removed:
pkg/NormqPCR/data/Bladder.qPCRBatch.RData
pkg/NormqPCR/data/Colon.qPCRBatch.RData
pkg/NormqPCR/inst/exData/qPCR.bladder.txt
pkg/NormqPCR/inst/exData/qPCR.colon.txt
pkg/NormqPCR/inst/exData/qPCR.geNorm.txt
pkg/NormqPCR/man/Bladder.qPCRBatch.Rd
pkg/NormqPCR/man/Colon.qPCRBatch.Rd
Log:
deleted files no longer needed
Deleted: pkg/NormqPCR/data/Bladder.qPCRBatch.RData
===================================================================
--- pkg/NormqPCR/data/Bladder.qPCRBatch.RData 2011-06-30 14:41:19 UTC (rev 139)
+++ pkg/NormqPCR/data/Bladder.qPCRBatch.RData 2011-06-30 14:42:30 UTC (rev 140)
@@ -1,23 +0,0 @@
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\ No newline at end of file
Deleted: pkg/NormqPCR/data/Colon.qPCRBatch.RData
===================================================================
--- pkg/NormqPCR/data/Colon.qPCRBatch.RData 2011-06-30 14:41:19 UTC (rev 139)
+++ pkg/NormqPCR/data/Colon.qPCRBatch.RData 2011-06-30 14:42:30 UTC (rev 140)
@@ -1,27 +0,0 @@
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Deleted: pkg/NormqPCR/inst/exData/qPCR.bladder.txt
===================================================================
--- pkg/NormqPCR/inst/exData/qPCR.bladder.txt 2011-06-30 14:41:19 UTC (rev 139)
+++ pkg/NormqPCR/inst/exData/qPCR.bladder.txt 2011-06-30 14:42:30 UTC (rev 140)
@@ -1,393 +0,0 @@
-"Detector" "Sample" "Cts"
-ATP5B X335.6 26111.47
-HSPCB X335.6 12180.7
-S100A6 X335.6 24028.9
-FLOT2 X335.6 64747.61
-TEGT X335.6 38842.49
-UBB X335.6 9790.97
-TPT1 X335.6 11841.62
-CFL1 X335.6 5104.02
-ACTB X335.6 3399.07
-RPS13 X335.6 11454.43
-RPS23 X335.6 8200.26
-GAPD X335.6 5894.79
-UBC X335.6 6897.57
-FLJ20030 X335.6 10834.64
-ATP5B X1131.1 30323.88
-HSPCB X1131.1 15560.5
-S100A6 X1131.1 21317.99
-FLOT2 X1131.1 65571.77
-TEGT X1131.1 50443.78
-UBB X1131.1 11295.03
-TPT1 X1131.1 12585.53
-CFL1 X1131.1 4922.07
-ACTB X1131.1 3419.79
-RPS13 X1131.1 14257.45
-RPS23 X1131.1 13438.27
-GAPD X1131.1 9120.68
-UBC X1131.1 7900.47
-FLJ20030 X1131.1 13610.7
-ATP5B X1250.1 30921.25
-HSPCB X1250.1 16655.81
-S100A6 X1250.1 24028.9
-FLOT2 X1250.1 43246.07
-TEGT X1250.1 42768.41
-UBB X1250.1 12631.56
-TPT1 X1250.1 12557.93
-CFL1 X1250.1 5945.21
-ACTB X1250.1 4839.77
-RPS13 X1250.1 8964.92
-RPS23 X1250.1 12668.98
-GAPD X1250.1 6842.03
-UBC X1250.1 9207.41
-FLJ20030 X1250.1 12835.31
-ATP5B X1206.1 12604.82
-HSPCB X1206.1 3754.86
-S100A6 X1206.1 7057.06
-FLOT2 X1206.1 18972.31
-TEGT X1206.1 5037.44
-UBB X1206.1 5359.05
-TPT1 X1206.1 8213.53
-CFL1 X1206.1 2179.25
-ACTB X1206.1 1623.63
-RPS13 X1206.1 5476.75
-RPS23 X1206.1 3439.84
-GAPD X1206.1 1560.4
-UBC X1206.1 2710.38
-FLJ20030 X1206.1 4828.79
-ATP5B X876.1 14733.78
-HSPCB X876.1 9665.6
-S100A6 X876.1 17503.27
-FLOT2 X876.1 41616.89
-TEGT X876.1 29909.31
-UBB X876.1 4912.6
-TPT1 X876.1 6095.82
-CFL1 X876.1 4462.66
-ACTB X876.1 1973
-RPS13 X876.1 5678.69
-RPS23 X876.1 4172.95
-GAPD X876.1 6505.25
-UBC X876.1 6740.97
-FLJ20030 X876.1 7720.24
-ATP5B X1216.1 34760.83
-HSPCB X1216.1 15455.01
-S100A6 X1216.1 28453.02
-FLOT2 X1216.1 87697.68
-TEGT X1216.1 48404.58
-UBB X1216.1 12169.34
-TPT1 X1216.1 12466.17
-CFL1 X1216.1 6298.89
-ACTB X1216.1 3954.09
-RPS13 X1216.1 11073.6
-RPS23 X1216.1 10326.08
-GAPD X1216.1 10768.4
-UBC X1216.1 6493.19
-FLJ20030 X1216.1 13610.7
-ATP5B X825.3 27685.22
-HSPCB X825.3 13489.17
-S100A6 X825.3 24028.9
-FLOT2 X825.3 37437.45
-TEGT X825.3 26065.69
-UBB X825.3 10949.53
-TPT1 X825.3 7441.49
-CFL1 X825.3 4635.99
-ACTB X825.3 3305.09
-RPS13 X825.3 6273.49
-RPS23 X825.3 6484.57
-GAPD X825.3 7389.78
-UBC X825.3 5978.56
-FLJ20030 X825.3 6516.87
-ATP5B X1264.1 40897.02
-HSPCB X1264.1 20989.83
-S100A6 X1264.1 42805.39
-FLOT2 X1264.1 103016.73
-TEGT X1264.1 66417.41
-UBB X1264.1 11155.54
-TPT1 X1264.1 9619.54
-CFL1 X1264.1 8632.38
-ACTB X1264.1 5785.19
-RPS13 X1264.1 15530.3
-RPS23 X1264.1 13780.62
-GAPD X1264.1 14790.58
-UBC X1264.1 11394.14
-FLJ20030 X1264.1 14339.18
-ATP5B X967.3 38823.9
-HSPCB X967.3 19743.36
-S100A6 X967.3 39337
-FLOT2 X967.3 71318.13
-TEGT X967.3 34319.71
-UBB X967.3 11225.07
-TPT1 X967.3 8148
-CFL1 X967.3 8799.37
-ACTB X967.3 5593.89
-RPS13 X967.3 9133.29
-RPS23 X967.3 11183.81
-GAPD X967.3 6472.15
-UBC X967.3 7861.82
-FLJ20030 X967.3 9448.76
-ATP5B X320.7 9909.38
-HSPCB X320.7 3460.54
-S100A6 X320.7 2506.59
-FLOT2 X320.7 12290.29
-TEGT X320.7 8793.18
-UBB X320.7 2245.55
-TPT1 X320.7 3783.48
-CFL1 X320.7 2191.49
-ACTB X320.7 2241.89
-RPS13 X320.7 2711.18
-RPS23 X320.7 2388.04
-GAPD X320.7 1917.92
-UBC X320.7 3696.3
-FLJ20030 X320.7 2961.79
-ATP5B X686.1 40368.58
-HSPCB X686.1 20150.4
-S100A6 X686.1 35394
-FLOT2 X686.1 35859.19
-TEGT X686.1 35765.54
-UBB X686.1 12093.97
-TPT1 X686.1 12280.62
-CFL1 X686.1 5933.4
-ACTB X686.1 4243.12
-RPS13 X686.1 21547.97
-RPS23 X686.1 14282
-GAPD X686.1 8301
-UBC X686.1 6481.18
-FLJ20030 X686.1 8568.76
-ATP5B X881.1 7205.55
-HSPCB X881.1 3507.94
-S100A6 X881.1 1417.02
-FLOT2 X881.1 6592.28
-TEGT X881.1 5701.3
-UBB X881.1 1995.51
-TPT1 X881.1 1742.21
-CFL1 X881.1 2267.6
-ACTB X881.1 3042.41
-RPS13 X881.1 1248.62
-RPS23 X881.1 1677.04
-GAPD X881.1 1551.09
-UBC X881.1 1797.11
-FLJ20030 X881.1 1189.3
-ATP5B X825.5 28974.53
-HSPCB X825.5 13127.09
-S100A6 X825.5 35394
-FLOT2 X825.5 45713.08
-TEGT X825.5 31819.12
-UBB X825.5 9374.27
-TPT1 X825.5 9766.75
-CFL1 X825.5 4845.13
-ACTB X825.5 3540.33
-RPS13 X825.5 9032.07
-RPS23 X825.5 9832.2
-GAPD X825.5 9807.91
-UBC X825.5 5550.02
-FLJ20030 X825.5 9572.73
-ATP5B X837.1 11811.25
-HSPCB X837.1 6514.56
-S100A6 X837.1 10997.26
-FLOT2 X837.1 27678.01
-TEGT X837.1 12924.38
-UBB X837.1 6337.86
-TPT1 X837.1 4724.8
-CFL1 X837.1 3174.95
-ACTB X837.1 3123.5
-RPS13 X837.1 3147.74
-RPS23 X837.1 3530.66
-GAPD X837.1 3740.86
-UBC X837.1 5190
-FLJ20030 X837.1 3485.9
-ATP5B X812.1 23378.81
-HSPCB X812.1 8209.71
-S100A6 X812.1 18130.5
-FLOT2 X812.1 33009.39
-TEGT X812.1 30743.54
-UBB X812.1 6871.02
-TPT1 X812.1 9186.34
-CFL1 X812.1 3392.97
-ACTB X812.1 1964.76
-RPS13 X812.1 7429.18
-RPS23 X812.1 7387.79
-GAPD X812.1 3626.37
-UBC X812.1 6239.89
-FLJ20030 X812.1 4494.72
-ATP5B X919.1 32151.51
-HSPCB X919.1 19878.11
-S100A6 X919.1 54384.36
-FLOT2 X919.1 52016.72
-TEGT X919.1 29909.31
-UBB X919.1 10226.19
-TPT1 X919.1 7849.22
-CFL1 X919.1 7900.02
-ACTB X919.1 4413.7
-RPS13 X919.1 9160.76
-RPS23 X919.1 8849.32
-GAPD X919.1 5314.31
-UBC X919.1 7487.67
-FLJ20030 X919.1 9572.73
-ATP5B X847.1 28230.6
-HSPCB X847.1 8493.74
-S100A6 X847.1 9688.1
-FLOT2 X847.1 18777.1
-TEGT X847.1 25887.04
-UBB X847.1 1085.47
-TPT1 X847.1 3629.38
-CFL1 X847.1 6163.83
-ACTB X847.1 4255.06
-RPS13 X847.1 3073.86
-RPS23 X847.1 2688.04
-GAPD X847.1 7454.18
-UBC X847.1 5147.08
-FLJ20030 X847.1 3696.49
-ATP5B X839.1 77348.09
-HSPCB X839.1 32661.23
-S100A6 X839.1 43107.87
-FLOT2 X839.1 105040.74
-TEGT X839.1 96952.53
-UBB X839.1 12321.51
-TPT1 X839.1 34709.07
-CFL1 X839.1 16611.82
-ACTB X839.1 13969.84
-RPS13 X839.1 21513.13
-RPS23 X839.1 13664.58
-GAPD X839.1 18175.26
-UBC X839.1 17158.8
-FLJ20030 X839.1 133210.99
-ATP5B X875.1 27505.78
-HSPCB X875.1 14243.57
-S100A6 X875.1 17017.15
-FLOT2 X875.1 64425.35
-TEGT X875.1 34319.71
-UBB X875.1 10418.59
-TPT1 X875.1 12537.67
-CFL1 X875.1 4465.57
-ACTB X875.1 2988.78
-RPS13 X875.1 12147.51
-RPS23 X875.1 10586.96
-GAPD X875.1 7440.09
-UBC X875.1 5918.31
-FLJ20030 X875.1 6307.93
-ATP5B X1014.1 4453.35
-HSPCB X1014.1 2496.56
-S100A6 X1014.1 2968.09
-FLOT2 X1014.1 6101.74
-TEGT X1014.1 4014.62
-UBB X1014.1 2302.05
-TPT1 X1014.1 1681.57
-CFL1 X1014.1 2465.37
-ACTB X1014.1 3040.91
-RPS13 X1014.1 1660.06
-RPS23 X1014.1 1401.24
-GAPD X1014.1 2197.12
-UBC X1014.1 2626.8
-FLJ20030 X1014.1 1328.64
-ATP5B X1353.1 37338.32
-HSPCB X1353.1 20847.53
-S100A6 X1353.1 20580.49
-FLOT2 X1353.1 30916.03
-TEGT X1353.1 32932.33
-UBB X1353.1 11155.54
-TPT1 X1353.1 10095.46
-CFL1 X1353.1 11413.71
-ACTB X1353.1 10680.68
-RPS13 X1353.1 15837.97
-RPS23 X1353.1 8667.7
-GAPD X1353.1 23408.51
-UBC X1353.1 12821.29
-FLJ20030 X1353.1 13260.46
-ATP5B X839.2 44504.55
-HSPCB X839.2 19476.57
-S100A6 X839.2 4724.02
-FLOT2 X839.2 23283.45
-TEGT X839.2 40758.21
-UBB X839.2 7311.46
-TPT1 X839.2 5459.9
-CFL1 X839.2 8179.4
-ACTB X839.2 10147.73
-RPS13 X839.2 13486.26
-RPS23 X839.2 8648.76
-GAPD X839.2 12004.47
-UBC X839.2 12428.89
-FLJ20030 X839.2 10151.03
-ATP5B X607.1 28047.62
-HSPCB X607.1 15246.18
-S100A6 X607.1 25781.9
-FLOT2 X607.1 70529.59
-TEGT X607.1 41607.88
-UBB X607.1 4205.84
-TPT1 X607.1 6123.03
-CFL1 X607.1 6190.66
-ACTB X607.1 3397.94
-RPS13 X607.1 8100.87
-RPS23 X607.1 7589.9
-GAPD X607.1 11344.94
-UBC X607.1 8028.62
-FLJ20030 X607.1 11489.17
-ATP5B X1271.1 36379.65
-HSPCB X1271.1 15989.71
-S100A6 X1271.1 17017.15
-FLOT2 X1271.1 72003.59
-TEGT X1271.1 29097.72
-UBB X1271.1 13358.02
-TPT1 X1271.1 8968.07
-CFL1 X1271.1 10563.62
-ACTB X1271.1 10173.66
-RPS13 X1271.1 16907.79
-RPS23 X1271.1 6806.21
-GAPD X1271.1 14190.91
-UBC X1271.1 8306.01
-FLJ20030 X1271.1 8968.74
-ATP5B X941.6 35909.59
-HSPCB X941.6 13038.1
-S100A6 X941.6 24541.9
-FLOT2 X941.6 14804.85
-TEGT X941.6 20489.4
-UBB X941.6 9730.33
-TPT1 X941.6 10633.28
-CFL1 X941.6 6260.1
-ACTB X941.6 3983.5
-RPS13 X941.6 11095.79
-RPS23 X941.6 11689.39
-GAPD X941.6 7660.58
-UBC X941.6 4950.94
-FLJ20030 X941.6 6145.61
-ATP5B X501.5 39846.98
-HSPCB X501.5 11853.74
-S100A6 X501.5 28654.08
-FLOT2 X501.5 30192.86
-TEGT X501.5 56311.54
-UBB X501.5 4732.84
-TPT1 X501.5 9594.73
-CFL1 X501.5 6900.14
-ACTB X501.5 4910.96
-RPS13 X501.5 4827.35
-RPS23 X501.5 7141.44
-GAPD X501.5 15950.87
-UBC X501.5 8008.77
-FLJ20030 X501.5 11193.53
-ATP5B X1164.1 26974.39
-HSPCB X1164.1 4390.77
-S100A6 X1164.1 5140.55
-FLOT2 X1164.1 13226.11
-TEGT X1164.1 17017.04
-UBB X1164.1 5809.87
-TPT1 X1164.1 3661.3
-CFL1 X1164.1 5047.27
-ACTB X1164.1 2975.01
-RPS13 X1164.1 4133.6
-RPS23 X1164.1 2351.13
-GAPD X1164.1 8944.65
-UBC X1164.1 6512.5
-FLJ20030 X1164.1 6105.69
-ATP5B X1356.1 26281.82
-HSPCB X1356.1 10206.17
-S100A6 X1356.1 10249.52
-FLOT2 X1356.1 57891.13
-TEGT X1356.1 30115.72
-UBB X1356.1 9975.18
-TPT1 X1356.1 2788.52
-CFL1 X1356.1 6968.89
-ACTB X1356.1 5261.5
-RPS13 X1356.1 5367.41
-RPS23 X1356.1 4813.71
-GAPD X1356.1 7271.32
-UBC X1356.1 6203.09
-FLJ20030 X1356.1 7000
Deleted: pkg/NormqPCR/inst/exData/qPCR.colon.txt
===================================================================
--- pkg/NormqPCR/inst/exData/qPCR.colon.txt 2011-06-30 14:41:19 UTC (rev 139)
+++ pkg/NormqPCR/inst/exData/qPCR.colon.txt 2011-06-30 14:42:30 UTC (rev 140)
@@ -1,521 +0,0 @@
-"Detector" "Sample" "Cts"
-UBC I459N 3958.55
-UBB I459N 6097.34
-SUI1 I459N 2936.85
-NACA I459N 7499.45
-FLJ20030 I459N 2518.29
-CFL1 I459N 2410.28
-ACTB I459N 1874.75
-CLTC I459N 3425.96
-RPS13 I459N 2239.75
-RPS23 I459N 3031.86
-GAPD I459N 4404.76
-TPT1 I459N 3204.57
-TUBA6 I459N 2962.46
-UBC X90 4705.92
-UBB X90 7252.68
-SUI1 X90 5169.71
-NACA X90 3367.78
-FLJ20030 X90 3989.24
-CFL1 X90 6360.44
-ACTB X90 6584.42
-CLTC X90 4481.03
-RPS13 X90 2904.27
-RPS23 X90 2828.19
-GAPD X90 4965.53
-TPT1 X90 5632.18
-TUBA6 X90 4554.39
-UBC X138 1538.28
-UBB X138 2305.99
-SUI1 X138 1265.48
-NACA X138 1882.46
-FLJ20030 X138 1239.6
-CFL1 X138 2482.09
-ACTB X138 2283.46
-CLTC X138 2497.37
-RPS13 X138 1610.1
-RPS23 X138 1545.22
-GAPD X138 2147.16
-TPT1 X138 1910.66
-TUBA6 X138 1850
-UBC X145 2012.11
-UBB X145 3251.92
-SUI1 X145 1702.49
-NACA X145 1993.03
-FLJ20030 X145 1628.98
-CFL1 X145 2865.56
-ACTB X145 2735.25
-CLTC X145 2547.03
-RPS13 X145 1737.97
-RPS23 X145 2029.65
-GAPD X145 2266.59
-TPT1 X145 2511.45
-TUBA6 X145 2303.22
-UBC X123 2739.8
-UBB X123 6660.88
-SUI1 X123 3124.58
-NACA X123 3760.65
-FLJ20030 X123 2426.44
-CFL1 X123 7677.81
-ACTB X123 7704.76
-CLTC X123 6652.33
-RPS13 X123 3015.12
-RPS23 X123 2831.53
-GAPD X123 5225.92
-TPT1 X123 3506.67
-TUBA6 X123 8096.7
-UBC X139 3344.54
-UBB X139 6149.64
-SUI1 X139 2175.99
-NACA X139 3862.52
-FLJ20030 X139 2063.54
-CFL1 X139 5710.53
-ACTB X139 4111.8
-CLTC X139 4442.88
-RPS13 X139 2816.63
-RPS23 X139 3241.66
-GAPD X139 4406.85
-TPT1 X139 3722.51
-TUBA6 X139 3553.46
-UBC X153 4333.54
-UBB X153 5090.95
-SUI1 X153 3257.97
-NACA X153 4340.72
-FLJ20030 X153 2134.1
-CFL1 X153 5879.24
-ACTB X153 3685.19
-CLTC X153 4713.66
-RPS13 X153 2880.26
-RPS23 X153 2663.46
-GAPD X153 3656.77
-TPT1 X153 3550.16
-TUBA6 X153 6104.44
-UBC C439.639 2825.75
-UBB C439.639 3558.9
-SUI1 C439.639 1464.83
-NACA C439.639 2910.31
-FLJ20030 C439.639 1658.21
-CFL1 C439.639 3662.49
-ACTB C439.639 6702.5
-CLTC C439.639 2921.54
-RPS13 C439.639 2480.9
-RPS23 C439.639 2391.16
-GAPD C439.639 2436.64
-TPT1 C439.639 2496.22
-TUBA6 C439.639 4218.23
-UBC C526.724 4064.76
-UBB C526.724 5589.55
-SUI1 C526.724 3355.63
-NACA C526.724 4307.07
-FLJ20030 C526.724 2727.46
-CFL1 C526.724 7269.54
-ACTB C526.724 6229.51
-CLTC C526.724 5712.1
-RPS13 C526.724 3606.58
-RPS23 C526.724 3224.79
-GAPD C526.724 5039.99
-TPT1 C526.724 4112.83
-TUBA6 C526.724 6194.05
-UBC C174.286 2670.53
-UBB C174.286 3260.76
-SUI1 C174.286 2045.94
-NACA C174.286 2521.06
-FLJ20030 C174.286 1896.28
-CFL1 C174.286 3794.67
-ACTB C174.286 3602.57
-CLTC C174.286 3438.16
-RPS13 C174.286 2777.96
-RPS23 C174.286 3112.8
-GAPD C174.286 2760.01
-TPT1 C174.286 2769.79
-TUBA6 C174.286 3528.83
-UBC X103A 5707.81
-UBB X103A 7537.55
-SUI1 X103A 5416.9
-NACA X103A 5390.79
-FLJ20030 X103A 3604.04
-CFL1 X103A 7225.91
-ACTB X103A 4930.64
-CLTC X103A 7040.96
-RPS13 X103A 1524.36
-RPS23 X103A 5302.32
-GAPD X103A 4053.56
-TPT1 X103A 5066.05
-TUBA6 X103A 4741.92
-UBC X112A 5391.46
-UBB X112A 10644.62
-SUI1 X112A 10814.62
-NACA X112A 10404.42
-FLJ20030 X112A 7223.42
-CFL1 X112A 7992.89
-ACTB X112A 6149.5
-CLTC X112A 6885.75
-RPS13 X112A 8849.46
-RPS23 X112A 11761.02
-GAPD X112A 9164.5
-TPT1 X112A 8206.5
-TUBA6 X112A 12122.17
-UBC X72A 6204.99
-UBB X72A 3910.08
-SUI1 X72A 7406.78
-NACA X72A 7988.22
-FLJ20030 X72A 5135.79
-CFL1 X72A 2747.37
-ACTB X72A 3694.39
-CLTC X72A 3409.62
-RPS13 X72A 6209.48
-RPS23 X72A 6374.25
-GAPD X72A 4157.14
-TPT1 X72A 5151.87
-TUBA6 X72A 8045.37
-UBC X180A 6157.59
-UBB X180A 7209.09
-SUI1 X180A 9556.48
-NACA X180A 6607.63
-FLJ20030 X180A 6590.27
-CFL1 X180A 7313.78
-ACTB X180A 5704.48
-CLTC X180A 5412.12
-RPS13 X180A 4928.71
-RPS23 X180A 5512.57
-GAPD X180A 4890.6
-TPT1 X180A 5993.87
-TUBA6 X180A 8058.29
-UBC X179 3428.6
-UBB X179 3942.93
-SUI1 X179 1828.7
-NACA X179 2573.59
-FLJ20030 X179 3221.06
-CFL1 X179 3717.93
-ACTB X179 4941.24
-CLTC X179 2972.3
-RPS13 X179 2211.5
-RPS23 X179 2507.02
-GAPD X179 2759.79
-TPT1 X179 2698.65
-TUBA6 X179 3150.8
-UBC X798.984 3952.57
-UBB X798.984 4597.58
-SUI1 X798.984 3418.58
-NACA X798.984 3452.85
-FLJ20030 X798.984 6660.63
-CFL1 X798.984 6400.62
-ACTB X798.984 3769.8
-CLTC X798.984 3478.11
-RPS13 X798.984 5425.96
-RPS23 X798.984 3835.9
-GAPD X798.984 4968.94
-TPT1 X798.984 3905.65
-TUBA6 X798.984 4651
-UBC X647.853 3825.63
-UBB X647.853 4437.37
-SUI1 X647.853 3527.49
-NACA X647.853 4197.06
-FLJ20030 X647.853 5460.45
-CFL1 X647.853 3715.28
-ACTB X647.853 5075.71
-CLTC X647.853 4378.36
-RPS13 X647.853 5644.41
-RPS23 X647.853 6833.87
-GAPD X647.853 8808.84
-TPT1 X647.853 8254.33
-TUBA6 X647.853 8631.49
-UBC X718.900T 7201.26
-UBB X718.900T 5224.15
-SUI1 X718.900T 3402.81
-NACA X718.900T 5815.8
-FLJ20030 X718.900T 5322.13
-CFL1 X718.900T 5005.81
-ACTB X718.900T 7170.09
-CLTC X718.900T 4095.93
-RPS13 X718.900T 3035.86
-RPS23 X718.900T 3578.35
-GAPD X718.900T 5596.79
-TPT1 X718.900T 4797.2
-TUBA6 X718.900T 5774.25
-UBC X425.609 3541.88
-UBB X425.609 4052.46
-SUI1 X425.609 3154.53
-NACA X425.609 2914.31
-FLJ20030 X425.609 1764.98
-CFL1 X425.609 3545.24
-ACTB X425.609 4627.57
-CLTC X425.609 3474.68
-RPS13 X425.609 3168.59
-RPS23 X425.609 2911.06
-GAPD X425.609 3173.46
-TPT1 X425.609 3809.26
-TUBA6 X425.609 3742.75
-UBC X521.714 5302.33
-UBB X521.714 8106.67
-SUI1 X521.714 5348.42
-NACA X521.714 5848.81
-FLJ20030 X521.714 5789.94
-CFL1 X521.714 3575.28
-ACTB X521.714 7410.67
-CLTC X521.714 4249.38
-RPS13 X521.714 5176.47
-RPS23 X521.714 5854.96
-GAPD X521.714 4584.69
-TPT1 X521.714 6838.5
-TUBA6 X521.714 4687.84
-UBC S.C685T 5004.66
-UBB S.C685T 6738.58
-SUI1 S.C685T 5554.78
-NACA S.C685T 9737.98
-FLJ20030 S.C685T 8308.01
-CFL1 S.C685T 8450.94
-ACTB S.C685T 6179.28
-CLTC S.C685T 3331.17
-RPS13 S.C685T 6699.62
-RPS23 S.C685T 9441.2
-GAPD S.C685T 5122.17
-TPT1 S.C685T 7250.06
-TUBA6 S.C685T 4344.21
-UBC H.C1095T 3982.2
-UBB H.C1095T 2557.64
-SUI1 H.C1095T 4537.32
-NACA H.C1095T 2387.8
-FLJ20030 H.C1095T 2109.33
-CFL1 H.C1095T 3161.43
-ACTB H.C1095T 2687.39
-CLTC H.C1095T 2092
-RPS13 H.C1095T 1532.75
-RPS23 H.C1095T 2278.88
-GAPD H.C1095T 4654.46
-TPT1 H.C1095T 2225.16
-TUBA6 H.C1095T 3978.68
-UBC H.C558T 4716.79
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-SUI1 H.C558T 5647.97
-NACA H.C558T 6882.77
-FLJ20030 H.C558T 4029.13
-CFL1 H.C558T 4683.33
-ACTB H.C558T 3486.24
-CLTC H.C558T 4213.21
-RPS13 H.C558T 6460.61
-RPS23 H.C558T 9754.52
-GAPD H.C558T 5677.21
-TPT1 H.C558T 6964.39
-TUBA6 H.C558T 4386.05
-UBC I.C578T 1231.36
-UBB I.C578T 1895.72
-SUI1 I.C578T 1321.67
-NACA I.C578T 3229.59
-FLJ20030 I.C578T 1782.45
-CFL1 I.C578T 2917.74
-ACTB I.C578T 1774.75
-CLTC I.C578T 1858.36
-RPS13 I.C578T 1368.67
-RPS23 I.C578T 2077.54
-GAPD I.C578T 1274.29
-TPT1 I.C578T 2369.95
-TUBA6 I.C578T 2147.86
-UBC I.C800T 4086.61
-UBB I.C800T 7278.89
-SUI1 I.C800T 7886.91
-NACA I.C800T 4421.9
-FLJ20030 I.C800T 2423.48
-CFL1 I.C800T 3697.27
-ACTB I.C800T 3715.78
-CLTC I.C800T 1830.08
-RPS13 I.C800T 7990.45
-RPS23 I.C800T 10740.16
-GAPD I.C800T 5697.61
-TPT1 I.C800T 8508.34
-TUBA6 I.C800T 6966.85
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-UBB I.C840T 13243.5
-SUI1 I.C840T 9066.08
-NACA I.C840T 9340.91
-FLJ20030 I.C840T 4858.49
-CFL1 I.C840T 10980.66
-ACTB I.C840T 6216.48
-CLTC I.C840T 4428.1
-RPS13 I.C840T 10132.59
-RPS23 I.C840T 12221.8
-GAPD I.C840T 9995.03
-TPT1 I.C840T 7995.71
-TUBA6 I.C840T 10664.17
-UBC I.C532T 11931.44
-UBB I.C532T 9251
-SUI1 I.C532T 13860.22
-NACA I.C532T 13012.8
-FLJ20030 I.C532T 13076.88
-CFL1 I.C532T 9299.28
-ACTB I.C532T 8916.01
-CLTC I.C532T 7092.05
-RPS13 I.C532T 11731.79
-RPS23 I.C532T 16024.67
-GAPD I.C532T 7395.11
-TPT1 I.C532T 11388.92
-TUBA6 I.C532T 11397.31
-UBC I.C396T 4776.18
-UBB I.C396T 5741.03
-SUI1 I.C396T 4372.62
-NACA I.C396T 3253.21
-FLJ20030 I.C396T 446.16
-CFL1 I.C396T 3334.39
-ACTB I.C396T 2214.35
-CLTC I.C396T 1898.27
-RPS13 I.C396T 3723.24
-RPS23 I.C396T 5582.61
-GAPD I.C396T 5155.29
-TPT1 I.C396T 4013.71
-TUBA6 I.C396T 4885.81
-UBC S.C61 8241.99
-UBB S.C61 3607.18
-SUI1 S.C61 9727.56
-NACA S.C61 8576.97
-FLJ20030 S.C61 10678.68
-CFL1 S.C61 3742.52
-ACTB S.C61 3298.47
-CLTC S.C61 6300.31
-RPS13 S.C61 7487.45
-RPS23 S.C61 7949.44
-GAPD S.C61 6451.67
-TPT1 S.C61 6986.3
-TUBA6 S.C61 3967.3
-UBC I.C451 4511.83
-UBB I.C451 8659.2
-SUI1 I.C451 6277.99
-NACA I.C451 7235.32
-FLJ20030 I.C451 7138.49
-CFL1 I.C451 5709.53
-ACTB I.C451 6575.17
-CLTC I.C451 5429.72
-RPS13 I.C451 6722.05
-RPS23 I.C451 7497.88
-GAPD I.C451 8975.81
-TPT1 I.C451 5128.3
-TUBA6 I.C451 9210.64
-UBC S.U20T 3560.3
-UBB S.U20T 3937.48
-SUI1 S.U20T 3508.78
-NACA S.U20T 6672.36
-FLJ20030 S.U20T 4953.67
-CFL1 S.U20T 2622.74
-ACTB S.U20T 3223.87
-CLTC S.U20T 2367.4
-RPS13 S.U20T 5590.82
-RPS23 S.U20T 7645.96
-GAPD S.U20T 2247.57
-TPT1 S.U20T 9100.87
-TUBA6 S.U20T 2648.39
-UBC C.C108T 857.83
-UBB C.C108T 1284.08
-SUI1 C.C108T 910.48
-NACA C.C108T 1797
-FLJ20030 C.C108T 818.42
-CFL1 C.C108T 1166.6
-ACTB C.C108T 921.87
-CLTC C.C108T 920.38
-RPS13 C.C108T 1146.99
-RPS23 C.C108T 1862.91
-GAPD C.C108T 1409.28
-TPT1 C.C108T 1689.71
-TUBA6 C.C108T 1149.85
-UBC C.C215T 2947.83
-UBB C.C215T 4760.91
-SUI1 C.C215T 3663.27
-NACA C.C215T 4838.07
-FLJ20030 C.C215T 1513.25
-CFL1 C.C215T 4575.58
-ACTB C.C215T 4346.73
-CLTC C.C215T 2770.98
-RPS13 C.C215T 2768.08
-RPS23 C.C215T 4427.38
-GAPD C.C215T 5714.05
-TPT1 C.C215T 3625.27
-TUBA6 C.C215T 4743.43
-UBC C.C242T 116.89
-UBB C.C242T 127.18
-SUI1 C.C242T 125.47
-NACA C.C242T 144.37
-FLJ20030 C.C242T 110.13
-CFL1 C.C242T 103.7
-ACTB C.C242T 114.47
-CLTC C.C242T 90.77
-RPS13 C.C242T 58.09
-RPS23 C.C242T 129.6
-GAPD C.C242T 212.68
-TPT1 C.C242T 196.75
-TUBA6 C.C242T 96.83
-UBC C.C415T 4724.34
-UBB C.C415T 4355.37
-SUI1 C.C415T 6713.07
-NACA C.C415T 7913.05
-FLJ20030 C.C415T 9462.04
-CFL1 C.C415T 6967.93
-ACTB C.C415T 6224.39
-CLTC C.C415T 4835.06
-RPS13 C.C415T 5850.36
-RPS23 C.C415T 5595.34
-GAPD C.C415T 4620.3
-TPT1 C.C415T 5867.08
-TUBA6 C.C415T 7681.06
-UBC C.C492T 6953.87
-UBB C.C492T 5202.75
-SUI1 C.C492T 6258.38
-NACA C.C492T 6687.99
-FLJ20030 C.C492T 4360.18
-CFL1 C.C492T 7116.15
-ACTB C.C492T 8151.69
-CLTC C.C492T 4428.52
-RPS13 C.C492T 4572.46
-RPS23 C.C492T 8442.93
-GAPD C.C492T 5641.73
-TPT1 C.C492T 8022.63
-TUBA6 C.C492T 4975.93
-UBC I.U58T 4252.38
-UBB I.U58T 6182.8
-SUI1 I.U58T 3996.02
-NACA I.U58T 5558.34
-FLJ20030 I.U58T 8573.48
-CFL1 I.U58T 4492.8
-ACTB I.U58T 3917.35
-CLTC I.U58T 2734.87
-RPS13 I.U58T 3278.8
-RPS23 I.U58T 6144.38
-GAPD I.U58T 4487.96
-TPT1 I.U58T 4990.69
-TUBA6 I.U58T 3495.83
-UBC I.C768T 3663.8
-UBB I.C768T 7544.72
-SUI1 I.C768T 2808.79
-NACA I.C768T 12555.35
-FLJ20030 I.C768T 6359.4
-CFL1 I.C768T 6965.74
-ACTB I.C768T 3396.25
-CLTC I.C768T 3198.26
-RPS13 I.C768T 4030.86
-RPS23 I.C768T 8202.12
-GAPD I.C768T 5359.22
-TPT1 I.C768T 4296.39
-TUBA6 I.C768T 4314.38
-UBC I.C1034T 2349.34
-UBB I.C1034T 2962.61
-SUI1 I.C1034T 1975.51
-NACA I.C1034T 2285.18
-FLJ20030 I.C1034T 2221.76
-CFL1 I.C1034T 2293.35
-ACTB I.C1034T 2097.19
-CLTC I.C1034T 1294.14
-RPS13 I.C1034T 1814.74
-RPS23 I.C1034T 2815.27
-GAPD I.C1034T 2583.82
-TPT1 I.C1034T 3412.88
-TUBA6 I.C1034T 1723.03
-UBC I.C1056T 1041.2
-UBB I.C1056T 1368.16
-SUI1 I.C1056T 533.07
-NACA I.C1056T 1691.63
-FLJ20030 I.C1056T 895.84
-CFL1 I.C1056T 1147.16
-ACTB I.C1056T 705.42
-CLTC I.C1056T 673.96
-RPS13 I.C1056T 420.51
-RPS23 I.C1056T 878.27
-GAPD I.C1056T 383.52
-TPT1 I.C1056T 1045.43
-TUBA6 I.C1056T 695.23
Deleted: pkg/NormqPCR/inst/exData/qPCR.geNorm.txt
===================================================================
--- pkg/NormqPCR/inst/exData/qPCR.geNorm.txt 2011-06-30 14:41:19 UTC (rev 139)
+++ pkg/NormqPCR/inst/exData/qPCR.geNorm.txt 2011-06-30 14:42:30 UTC (rev 140)
@@ -1,851 +0,0 @@
-"Detector" "Sample" "Cts"
-ACTB BM1 0.0424753
-B2M BM1 0.0575575
-GAPD BM1 0.1546512
-HMBS BM1 0.1096441
-HPRT1 BM1 0.118002
-RPL13A BM1 0.0741848
-SDHA BM1 0.2033609
-TBP BM1 0.1902234
-UBC BM1 0.0991928
-YWHAZ BM1 0.1032482
-ACTB BM2 0.0191865
-B2M BM2 0.0194445
-GAPD BM2 0.0703254
-HMBS BM2 0.0879577
-HPRT1 BM2 0.0707967
-RPL13A BM2 0.0440644
-SDHA BM2 0.1403777
-TBP BM2 0.1060434
-UBC BM2 0.0367942
-YWHAZ BM2 0.0393353
-ACTB BM3 0.1631383
-B2M BM3 0.295588
-GAPD BM3 0.7732798
-HMBS BM3 0.4045788
-HPRT1 BM3 0.5574677
-RPL13A BM3 0.3481331
-SDHA BM3 0.4472067
-TBP BM3 0.4686091
-UBC BM3 0.3400902
-YWHAZ BM3 0.3587541
-ACTB BM4 0.5725601
-B2M BM4 1
-GAPD BM4 1
-HMBS BM4 0.7968714
-HPRT1 BM4 1
-RPL13A BM4 0.5706515
-SDHA BM4 0.9736405
-TBP BM4 1
-UBC BM4 0.5979617
-YWHAZ BM4 0.7862987
-ACTB BM5 0.0370407
-B2M BM5 0.0443597
-GAPD BM5 0.11919
-HMBS BM5 0.2081702
-HPRT1 BM5 0.1304351
-RPL13A BM5 0.1078288
-SDHA BM5 0.2138061
-TBP BM5 0.2006627
-UBC BM5 0.0759393
-YWHAZ BM5 0.1001915
-ACTB BM6 0.4547358
-B2M BM6 0.361158
-GAPD BM6 0.7257439
-HMBS BM6 0.3551782
-HPRT1 BM6 0.54641
-RPL13A BM6 0.5179835
-SDHA BM6 1
-TBP BM6 0.7185101
-UBC BM6 0.6765965
-YWHAZ BM6 0.5861008
-ACTB BM7 0.2459956
-B2M BM7 0.2560527
-GAPD BM7 0.3458159
-HMBS BM7 0.1785298
-HPRT1 BM7 0.2403124
-RPL13A BM7 0.1876996
-SDHA BM7 0.433967
-TBP BM7 0.5409637
-UBC BM7 0.2020073
-YWHAZ BM7 0.4032301
-ACTB BM8 0.1809303
-B2M BM8 0.0629878
-GAPD BM8 0.1353151
-HMBS BM8 0.2255396
-HPRT1 BM8 0.1980004
-RPL13A BM8 0.1658849
-SDHA BM8 0.2792762
-TBP BM8 0.4032301
-UBC BM8 0.1114901
-YWHAZ BM8 0.1631383
-ACTB BM9 1
-B2M BM9 0.4211193
-GAPD BM9 0.7453921
-HMBS BM9 1
-HPRT1 BM9 0.8157169
-RPL13A BM9 1
-SDHA BM9 0.9291722
-TBP BM9 0.7889286
-UBC BM9 1
-YWHAZ BM9 1
-ACTB POOL.brain 9.022168
-B2M POOL.brain 1.0934566
-GAPD POOL.brain 11.9035163
-HMBS POOL.brain 0.0237385
-HPRT1 POOL.brain 0.2558446
-RPL13A POOL.brain 0.540524
-SDHA POOL.brain 0.6990019
-TBP POOL.brain 0.049487
-UBC POOL.brain 3.5539607
-YWHAZ POOL.brain 6.3116425
-ACTB POOL.fetal.brain 14.6127978
-B2M POOL.fetal.brain 0.3994356
-GAPD POOL.fetal.brain 6.1949656
-HMBS POOL.fetal.brain 0.0135651
-HPRT1 POOL.fetal.brain 0.1552558
-RPL13A POOL.fetal.brain 1.4254853
-SDHA POOL.fetal.brain 0.5358732
-TBP POOL.fetal.brain 0.1019356
-UBC POOL.fetal.brain 4.2478517
-YWHAZ POOL.fetal.brain 9.886968
-ACTB POOL.heart 3.0656054
-B2M POOL.heart 4.2382155
-GAPD POOL.heart 19.6907674
-HMBS POOL.heart 0.0286896
-HPRT1 POOL.heart 0.0561318
-RPL13A POOL.heart 1.0391068
-SDHA POOL.heart 2.0741779
-TBP POOL.heart 0.0208213
-UBC POOL.heart 6.0785742
-YWHAZ POOL.heart 1.9144404
-ACTB POOL.kidney 7.7457994
-B2M POOL.kidney 3.1129275
-GAPD POOL.kidney 8.9119658
-HMBS POOL.kidney 0.0273416
-HPRT1 POOL.kidney 0.1126411
-RPL13A POOL.kidney 1.3554263
-SDHA POOL.kidney 1.0909746
-TBP POOL.kidney 0.0366808
-UBC POOL.kidney 4.361506
-YWHAZ POOL.kidney 1.8244893
-ACTB POOL.liver 6.5063173
-B2M POOL.liver 7.6373649
-GAPD POOL.liver 7.3373877
-HMBS POOL.liver 0.0406511
-HPRT1 POOL.liver 0.0748952
-RPL13A POOL.liver 1.4625404
-SDHA POOL.liver 1.1615715
-TBP POOL.liver 0.0370226
-UBC POOL.liver 2.8710638
-YWHAZ POOL.liver 1.5635484
-ACTB POOL.lung 15.0615098
-B2M POOL.lung 13.5804182
-GAPD POOL.lung 2.6710306
-HMBS POOL.lung 0.0086155
-HPRT1 POOL.lung 0.0643111
-RPL13A POOL.lung 1.2350624
-SDHA POOL.lung 0.3215653
-TBP POOL.lung 0.0380723
-UBC POOL.lung 8.0665187
-YWHAZ POOL.lung 3.9214688
-ACTB POOL.mammery.gland 9.7993665
-B2M POOL.mammery.gland 3.8601103
-GAPD POOL.mammery.gland 5.5733812
-HMBS POOL.mammery.gland 0.0240373
-HPRT1 POOL.mammery.gland 0.0532142
-RPL13A POOL.mammery.gland 2.9849454
-SDHA POOL.mammery.gland 0.4918616
-TBP POOL.mammery.gland 0.0473447
-UBC POOL.mammery.gland 4.7798117
-YWHAZ POOL.mammery.gland 2.7550675
-ACTB POOL.trachea 8.739167
-B2M POOL.trachea 5.1909046
-GAPD POOL.trachea 4.823244
-HMBS POOL.trachea 0.026192
-HPRT1 POOL.trachea 0.0699069
-RPL13A POOL.trachea 1.6568525
-SDHA POOL.trachea 0.486486
-TBP POOL.trachea 0.0595541
-UBC POOL.trachea 8.3400301
-YWHAZ POOL.trachea 1.7419531
-ACTB POOL.uterus 27.1239918
-B2M POOL.uterus 5.4975715
-GAPD POOL.uterus 4.1391024
-HMBS POOL.uterus 0.0168663
-HPRT1 POOL.uterus 0.039652
-RPL13A POOL.uterus 1.9461086
-SDHA POOL.uterus 0.3677314
-TBP POOL.uterus 0.0399177
-UBC POOL.uterus 5.0741901
-YWHAZ POOL.uterus 2.9739868
-ACTB FIB1 0.4993028
-B2M FIB1 0.3278251
-GAPD FIB1 0.5162567
-HMBS FIB1 0.3056248
-HPRT1 FIB1 0.4829056
-RPL13A FIB1 0.3355779
-SDHA FIB1 0.3939143
-TBP FIB1 0.4383361
-UBC FIB1 0.4472067
-YWHAZ FIB1 0.5725601
-ACTB FIB2 0.2387128
-B2M FIB2 0.4780923
-GAPD FIB2 0.2877965
-HMBS FIB2 0.1156613
-HPRT1 FIB2 0.313899
-RPL13A FIB2 0.2395113
-SDHA FIB2 0.2509738
-TBP FIB2 0.2363335
-UBC FIB2 0.2218053
-YWHAZ FIB2 0.351638
-ACTB FIB3 0.2621082
-B2M FIB3 0.4780923
-GAPD FIB3 0.1609739
-HMBS FIB3 0.0894386
-HPRT1 FIB3 0.1475879
-RPL13A FIB3 0.2728241
-SDHA FIB3 0.2411161
-TBP FIB3 0.1864502
-UBC FIB3 0.1779347
-YWHAZ FIB3 0.306647
-ACTB FIB4 0.1510783
-B2M FIB4 1
-GAPD FIB4 0.4623917
-HMBS FIB4 0.2081702
-HPRT1 FIB4 0.2849279
-RPL13A FIB4 0.2774173
-SDHA FIB4 0.3759233
-TBP FIB4 0.1152758
-UBC FIB4 0.3721764
-YWHAZ FIB4 0.2218053
-ACTB FIB5 0.6788595
-B2M FIB5 0.5999617
-GAPD FIB5 0.6949141
-HMBS FIB5 0.3344593
-HPRT1 FIB5 0.7655722
-RPL13A FIB5 0.5821997
-SDHA FIB5 0.5537572
-TBP FIB5 0.8022109
-UBC FIB5 0.5725601
-YWHAZ FIB5 0.851906
-ACTB FIB6 0.0001598
-B2M FIB6 0.0014965
-GAPD FIB6 0.0011456
-HMBS FIB6 0.0059427
-HPRT1 FIB6 0.0007649
-RPL13A FIB6 0.0015524
-SDHA FIB6 0.0009345
-TBP FIB6 9.62e-05
-UBC FIB6 0.0003768
-YWHAZ FIB6 0.0006896
-ACTB FIB7 0.5744752
-B2M FIB7 0.590028
-GAPD FIB7 0.4877674
-HMBS FIB7 0.3587541
-HPRT1 FIB7 0.5128205
-RPL13A FIB7 0.4354185
-SDHA FIB7 0.4383361
-TBP FIB7 0.5725601
-UBC FIB7 0.4183163
-YWHAZ FIB7 0.6856942
-ACTB FIB8 0.1839765
-B2M FIB8 0.4845208
-GAPD FIB8 0.1927812
-HMBS FIB8 0.0772178
-HPRT1 FIB8 0.1515836
-RPL13A FIB8 0.6328872
-SDHA FIB8 0.1344145
-TBP FIB8 0.1085513
-UBC FIB8 0.1815355
-YWHAZ FIB8 0.169808
-ACTB FIB9 0.2811475
-B2M FIB9 0.5861008
-GAPD FIB9 0.3939143
-HMBS FIB9 0.1380535
-HPRT1 FIB9 0.3861008
[TRUNCATED]
To get the complete diff run:
svnlook diff /svnroot/qpcr -r 140
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